Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8642 cluster # 8642       Sequences # 7       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8642#0 length = 732 sequences # 7  
consensusID : consensus_8642#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 732
fasta sequence 
                              [CGGCTCGCGGGNAATTCGATTGCACTGAAGTCTTACTAGACTTGAATCATTTGACTCATCAGCGTTAGGAAAGTCATGGAGTGTATAATAGGGATCAAGATGAACGATTTTGTGTTACTGGCAGCAGACATGCGGTGTGCCCACTCAATTCTTACCATTAAACATGATGAGCTCAAGATGTTCAAATTTAGTAAACGAGTGCTAGCTGCTGTATGTGGTGAATCTGGTGACACTTCTCAGTTTTCCGAGTTCATTCAACAAAACATGCAGCTATACGAAATAAGAAATGGATATGAGTTAACTCCTAGTGCAGCTGCTAATTTTACCAGGAACAATATGGCAGAATCCCTGCGTAGTCGATCTCCGTACTTTGTCAATTTGCTTATAGCCGGCTTCGACCTTCAGACCGGCCCTGAGCTGTATTATTTGGACTATTTGGCCTCTCTCATTAAGGTACCTTTCGCAGTTCATGGATACGGGGCTCTTGTTGCTTTGAGTATCTTAGACCGTATGCACCGTCCAGATATGACTGTAAATGAAGCTGTCGCACTTTTGCGTTTGTGTATTCAGGAAGTTCAAAAACGTCTAGTTATAAATCTTGATCGGTACATGGTCCGTATTGTTACTAAAGATGGCATCGAGGAGCTACCCGACCTGACTGATTTTGCTGTAAAAGAATAAATTNTCTAAAATAAATTTCTTACGCCTTGTAGNNNNNNNNNNNNNNNNNNN]

[+] EMBL CD191200             [CGGCTCGCGGGNAATTCGATTGCACTGAAGTCTTACTAGACTTGAATCATTTGACTCATCAGCGTTAGGAAAGTCATGGAGTGTATAATAGGGATCAAGATGAACGATTTTGTGTTACTGGCAGCAGACATGCGGTGTGCCCACTCAATTCTTACCATTAAACATGATGAGCTCAAGATGTTCAAATTTAGTAAACGAGTGCTAGCTGCTGTATGTGGTGAATCTGGTGACACTTCTCAGTTTTCCGAGTTCATTCAACAAAACATGCAGCTATACGAAATAAGAAATGGATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AI977632             [                                      cACTTGAATCATTTGACTCATCAGCGTTAGGAAAGTCATGGAGTGTATAATAGGGATCAAGATGAACGATTTTGTGTTACTGGCAGCAGACATGCGGTGTGCCCACTCAATTCTTACCATTAAACATGATGAGCTCAAGATGTTCAAATTTAGTAAACGAGTGCTAGCTGCTGTATGTGGTGAATCTGGTGACACTTCTCAGTTTTCCGAGTTCATTCAACAAAACATGCAGCTATACGAAATAAGAAATGGATATGAGTTAACTCCTAGTGCAGCTGCTAATTTTACCAGGAACAATATGGCAGAATCCCTGCGTAGTCGATCTCCGTACTTTGTCAATTTGCTTATAGCCGGCTTCGACCTTCAGACCGGCCCTGAGCTGTATTATTTGGACTATTTGGCCTCTCTCATTAAGGTACCTTTCGCAGTTCATGGATACGGNGCTCTTGTTGCTTTGAGTATCTTAGACCGTATGCACCGTCCAGATATGACTGTAAATGAAGCTGTCGCACTTTTGCGTTTGTGTATT                                                                                                                                                                     ]
[+] EMBL CD191349             [                                                ATTTGATTTCCCCGCGTTAGGAAAGTCATGGAGTGTATAATAGGGATCAAGATGAACGATTTTGTGTTACTGGCAGCAGACATGCGGTGTGCCCACTCAATTCTTACCATTAAACATGATGAGCTCAAGATGTTCAAATTTAGTAAACGAGTGCTAGCTGCTGTATGTGGTGAATCTGGTGACACTTCTCAGTTTTCCGAGTTCATTCAACAAAACATGCAGCTATACGAAATAAGAAATGGATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD134326             [                                                ATTTGACTCATCAGCGTTAGGAAAGTCATGGAGTGTATAATAGGGATCAAGATGAACGATTTTGTGTTACTGGCAGCAGACATGCGGTGTGCCCACTCAATTCTTACCATTAAACATGATGAGCTCAAGATGTTCAAATTTAGTAAACGAGTGCTAGCTGCTGTATGTGGTGAATCTGGTGACACTTCTCAGTTTTCCGAGTTCATTCAACAAAACATGCCGCTATTCGAAATAAGAAATGGATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD141258             [                                                   TGACTCATCAGCGTTAGGAAAGTCATGGAGTGTATAATAGGGATCAAGATGAACGATTTTGTGATACTGGCAGCAGACATGCGGTGTGCCCACTCAATTCTTACCATTAAACATGATGAGCTCAAGATGTTCAAATTTAGTAAACGAGTGCTAGCTGCTGTATGTGGTGAATCTGGTGACACTTCTCAGTTTTCCGAGTTCATTCAACAAAACATGCAGCTATACGAAATAAGACATGGATATGAGTTAACTCCTAGTGCAGCTGCTAATTTTACCAGGCACGATATGGCAGAAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL SMAA25733            [                                                                                                                                                                                                                                                                                                                                     CCAGGAACAATATGGCAGAATCCCTGCGTAGTCGATCTCCGTACTTTGTCAATTNGCTTATAGCCGGCTTCGACCTTCAGACCGGCCCTGAGCTGTATTATTTGGACTATTTGGCCTCTCTCATTAAGGTACCTTTCGCAGTTCATGGATACGGGGCTCTTGTTGCTTTGAGTATCTTAGACCGTATGCACCGNCCAGATATGACTGTAAATGAAGCTGTCNCACTTTTGCGTTTGTGTATTCAGGAAGTTCAAAAACGTCTAGTTATAAATCTTGATCGGTACATGGTCCGTATTGTTACTAAAGATGGCATCGAGGAGCTACCCGACCTGACTGATTTTGCTGTAAAAGAATAAATTNT                                              ]
[-] EMBL AI394829             [                                                                                                                                                                                                                                                                                                                                                                                                                   AGACCGGCCCTGAGNTGTATTATTTGGACTATTTGGCTTCTCTCATTAAGGTACCTTTCGCAGTGCATGGATACGGGGCTCTTGTTGCTTTGAGTATCTTAGACCGTATGCACCGTCCAGATATGACTGTAAATGAAGCTGTCGCACTTTTGCGTTTGTGTATTCAGGAAGTTCAAAAACGTCTAGTTATAAATTTTGATCGGTACATGGTCCGTATTGTTACTAAAGATGGCATCGAGGAGCTACCCGACCTGACTGATTTTGCTGTAAAAGGATAAATTTTCTAAAATAAATTTCTTACGCCTTGTAGNNNNNNNNNNNNNNNNNNN]




>consensus_8642#0
CGGCTCGCGGGNAATTCGATTGCACTGAAGTCTTACTAGACTTGAATCATTTGACTCATC
AGCGTTAGGAAAGTCATGGAGTGTATAATAGGGATCAAGATGAACGATTTTGTGTTACTG
GCAGCAGACATGCGGTGTGCCCACTCAATTCTTACCATTAAACATGATGAGCTCAAGATG
TTCAAATTTAGTAAACGAGTGCTAGCTGCTGTATGTGGTGAATCTGGTGACACTTCTCAG
TTTTCCGAGTTCATTCAACAAAACATGCAGCTATACGAAATAAGAAATGGATATGAGTTA
ACTCCTAGTGCAGCTGCTAATTTTACCAGGAACAATATGGCAGAATCCCTGCGTAGTCGA
TCTCCGTACTTTGTCAATTTGCTTATAGCCGGCTTCGACCTTCAGACCGGCCCTGAGCTG
TATTATTTGGACTATTTGGCCTCTCTCATTAAGGTACCTTTCGCAGTTCATGGATACGGG
GCTCTTGTTGCTTTGAGTATCTTAGACCGTATGCACCGTCCAGATATGACTGTAAATGAA
GCTGTCGCACTTTTGCGTTTGTGTATTCAGGAAGTTCAAAAACGTCTAGTTATAAATCTT
GATCGGTACATGGTCCGTATTGTTACTAAAGATGGCATCGAGGAGCTACCCGACCTGACT
GATTTTGCTGTAAAAGAATAAATTNTCTAAAATAAATTTCTTACGCCTTGTAGNNNNNNN
NNNNNNNNNNNN

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)