Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8663 cluster # 8663       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8663#0 length = 450 sequences # 7  

consensusID : consensus_8663#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 450
fasta sequence
                              [GAAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGTTCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC-CGGGATAAAATGATGAATCTATAGTGGTTATTA-CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGTGATAGTGCCTGTAGTAGTT-CAACTCCACAGCCTTCAATATCTAAATTAGATGAGTGTGTTAGGTCTCGAAGGAAATTTGCAGATGGTATATCATTGAGATTTAGGTCAAATGCACGATAAAGGATTTCAATTTCAAAACGTAACC]

[+] EMBL CD166402             [GAAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGTTCAAATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAAAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC CGGGATAAAATGATGAATCTATAGTGGTTATgggt                                                                                                                                                                                                                                      ]
[-] EMBL CD126622             [ AAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGTTCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATACTCGGGATAAAATGATGAATCTATAGTGGTTATTATCAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGT ATAGTGCCTGTAGTAGTT CAACTCCACAGCC                                                                                                                 ]
[-] EMBL CD166442             [ AAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGTTCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCCCCGCCCCAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC CGGGATAAAATGATGAATCTATAGTGGTTATTA CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGTGATAGTGC                                                                                                                                          ]
[-] EMBL CD126603             [ AAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGTTCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC CGGGATAAAATGATGAATCTATAGTGGTTATTA CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTGATAGATCC ATGGTAGTAG                                                                                                                                                                     ]
[+] EMBL CD126616             [             tgTGTTGATGTTA AAAGC AGCATGTTGGACAGCTGTTTCTGTTGTTCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC CGGGATAAAATGATGAATCTATAGTGGTTATTA CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGTGATAGTG                                                                                                                                           ]
[+] EMBL CD132069             [                                                                 TGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC CGGGATAAAATGATGAATCTATAGTGGTTATTA CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGTGATAGTGCCTGTAGTAGTTGCAACGAAACACAGTTCAATATCTAAATTAGATGAGTGTGTTAGGTCTCGAAGGAAATTTGCAGATGGTATATCATTGAGATTTAGGTCAAATGCACGATAAAGGATTTCAATTTCAAAACGTAACC]
[-] EMBL CD126624             [                                                                                                                                                                                      AATAC CGGGATAAAATGATGAATCTATAGTGGTTATTA CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGT ATAGTGCCTGTAGTAGTT CAACTCCACAGCCTc                                                                                                               ]


>consensus_8663#0 GAAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGT TCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTT GTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAA CAAATACCGGGATAAAATGATGAATCTATAGTGGTTATTACAGGTGCACTAGTAATATTT GATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTC GTAGTGATAGTGCCTGTAGTAGTTCAACTCCACAGCCTTCAATATCTAAATTAGATGAGT GTGTTAGGTCTCGAAGGAAATTTGCAGATGGTATATCATTGAGATTTAGGTCAAATGCAC GATAAAGGATTTCAATTTCAAAACGTAACC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)