These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8663#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 450 fasta sequence [GAAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGTTCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC-CGGGATAAAATGATGAATCTATAGTGGTTATTA-CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGTGATAGTGCCTGTAGTAGTT-CAACTCCACAGCCTTCAATATCTAAATTAGATGAGTGTGTTAGGTCTCGAAGGAAATTTGCAGATGGTATATCATTGAGATTTAGGTCAAATGCACGATAAAGGATTTCAATTTCAAAACGTAACC] [+] EMBL CD166402 [GAAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGTTCAAATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAAAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC CGGGATAAAATGATGAATCTATAGTGGTTATgggt ] [-] EMBL CD126622 [ AAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGTTCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATACTCGGGATAAAATGATGAATCTATAGTGGTTATTATCAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGT ATAGTGCCTGTAGTAGTT CAACTCCACAGCC ] [-] EMBL CD166442 [ AAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGTTCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCCCCGCCCCAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC CGGGATAAAATGATGAATCTATAGTGGTTATTA CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGTGATAGTGC ] [-] EMBL CD126603 [ AAATCTGTTGTTGATGTTTATGAAACAAAGCAAGCATGTTGGACAGCTGTTTCTGTTGTTCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC CGGGATAAAATGATGAATCTATAGTGGTTATTA CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTGATAGATCC ATGGTAGTAG ] [+] EMBL CD126616 [ tgTGTTGATGTTA AAAGC AGCATGTTGGACAGCTGTTTCTGTTGTTCAGATGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC CGGGATAAAATGATGAATCTATAGTGGTTATTA CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGTGATAGTG ] [+] EMBL CD132069 [ TGACGGTAAATTCGAGCCGGTGGTAGTAGCTCCAGCAGAAAAAGTAGTCACTGTTGTTGTTGCTGCCACCGCCACAGTTGTTATAACCGAAAAGTCAGGAGTAGTAAATGAAGAACAAATAC CGGGATAAAATGATGAATCTATAGTGGTTATTA CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGTGATAGTGCCTGTAGTAGTTGCAACGAAACACAGTTCAATATCTAAATTAGATGAGTGTGTTAGGTCTCGAAGGAAATTTGCAGATGGTATATCATTGAGATTTAGGTCAAATGCACGATAAAGGATTTCAATTTCAAAACGTAACC] [-] EMBL CD126624 [ AATAC CGGGATAAAATGATGAATCTATAGTGGTTATTA CAGGTGCACTAGTAATATTTGATACTATAATTTGACCAGGTGTATTCATAGATCCAATGGTAGTAGTGGTAGTAGTAGTCGTAGT ATAGTGCCTGTAGTAGTT CAACTCCACAGCCTc ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||