These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8715#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1675 fasta sequence [AGAGACAGATGAACACCTACCTATTCATATCTGTATTCATTCATTATATGGAATGTGAAATGAAATATTAAAACAAACGAAAAAAAAACACCCCCCTCTCACAAACGAAGACTTACTTATGCCTGTTACCCCTTTGTGGAGGAGTATAGGCCGACGCAAACAAGGAACATAAATAGAAAATATATTTAAAAGAAATGAAATACATTTTATAATTGTATCTAGTTTAAGATTTTACATATACAAAGAAAGAGAACCGGATTTTCCTTTGATTGTATCTAAATT-AATTAACATGGCAGATGTGTTTTCTTATTGTAAGTAAGAATATGAATGATAGAAAGAAAGAAAAGAGAAAGAAAAATCGATATAAAGAATATTTAAAGTAAACAAATA-CACAAATGTGTGTAGAAAAAATAAATAAAGAAAAACAATGGACATTCAATTCCATTAGAAACATAAAACAGATATGTATATATGTATATATATATAAATGAAGATTACATAGAAATATAATTGAGCAATTCAAAAGAAAAAAAGGTTATACAATTACAAAGATATTACGTAATATGGATTACATTTATTTGATAAAATAACATCATTATATAAATCATTGTATACAATGAAGAGATTGATTA-TGGGTATTATTACTTCTTAGGTACTACTGTAGCTATAACAATAATGATTATAATTACTACAATAGCACAACAAACTCCCAAT-ATAATGAATTTTTTTTTCCGAGATTTTTTCTTGTATACAACTGCTTTTTTAGTTTCCTGTCGAGCCTCAGCAACATAATCCTGTGTTTGTTTAACGTTGACATCGATTCGATCAACGAGTTCACCTTGTGTTTCAATTAATGCAGCCATATCGGTAAATAAACCGTGTAATTCTCGAATACTCTTTTCTAATTTCATTATATCTTCATGACGTGCTTCAATATCGGCTAGATTTTGACGTGCTTGTTGAGTATCTGTTATAATTCCTTGAGTAAAAATCTGTGGATTTCCAGATTCAAGCATATTTTCTAGTTCATTATCTGTAACTGATCGTTGAGCAACTTCTAATTGACGTTTCAATAAAGCTTTACAACGTTCTTTATGCTCAACCTGTATACGACCATATTGATGCATAATGGTTGTGATAGTTTTAGATAAAGTGAGGAACTGGGTTTTACGAATACGTAAATCAGCGGATGTAGCATCATTAGCTTCTTGTTCTCTGATTGTTTGTTCCAATGATTTTAGCTTAAGTCGAATTTCTTTAGCTGAACGTGTAATACTTTCATTTAATTCTTCTAGTTGTGTTTTCGTTTTTGGATTTTGTTGAAGTGCTGACAAAATTTCACCATGTTTTGTTTTAACTTGACTTATTTCTATGCGAGTCTTTTCAATTTCTCTTCGAATCCATTCAACTTCACTAAAGAAAAGATCCATTTGAGAACCACCATCTACTACCACGGCTTCTTCTGCTGATGGGAGATTTGGTAGTTCATTATTCTGTCGTAGGGACTGCGAATAAATCTTTGGCCATTGTTTGCCGTATTAATTAATACTTTATATTGTATACAAAGACAGTAAAAGTTATAGAAGTAGAATTAATTTAAAAAAGGAATAAATCCCTGTCATAGAAAATCAATCTTTGAAGGAAATTGTTCCGCAAAACCTTGAAAGAGTTCCAA] [+] EMBL BF936499 [AGAGACAGATGAACACCTACCTATTCATATCTGTATTCATTCATTATATGGAATGTGAAATGAAATATTAAAACAAACGAAAAAAAAACACCCCCCTCTCACAAACGAAGACTTACTTATGCCTGTTACCCCTTTGTGGAGGAGTATAGGCCGACGCAAACAAGGAACATAAATAGAAAATATATTTAAAAGAAATGAAATACATTTTATAATTGTATCTAGTTTAAGATTTTACATATACAAAGAAAGAGAACCGGATTTTCCTTTGATTGTATCTAAATT AATTAACATGGCAGATGTGTTTTCTTATTGTAAGTAAGAATATGAATGATAGAAAGAAAGAAAAGAGAAAGAAAAATCGATATAAAGAATATTTAAAGTAAACAAATACCACAAATGTGTGTAGAAAAAATAAATAAAGAAAAACAATGGACATTCAATTCCATTAGAAACATAAAACAGATATGTATATATGTATATATATATAAATGAAGATTACATAGAAATATAATTGAGCAATTCAAAAGAAAAAAAGGTTATACAATTACAAAGATATTACGTAATATGGATTACATTTATTTGATAAAATAACATCATTATATAAATCATTGTATACAATGAAGAGATTGATTATTGGGTATTATTACTTCTTAAGTACTACTGTAGCTATAAC ATAATGATTATAATTACTACAATAGCACAACAAACTCCCAAT ATAATGAATTTTTTTTTCCGAGATTTTTTCTTG ] [-] EMBL BF936275 [ AATTAAATTAACATGGCAGATGTGTTTTCTTATTGTAAGTAAGAATATGAATGATAGAAAGAAAGAAAAGAGAAAGAAAAATCGATATAAAGAATATTTAAAGTAAACAAATA CACAAATGTGTGTAGAAAAAATAAATAAAGAAAAACAATGGACATTCAATTCCATTAGAAACATAAAACAGATATGTATATATGTATATATATATAAATGAAGATTACATAGAAATATAATTGAGCAATTCAAAAGAAAAAAAGGTTATACAATTACAAAGATATTACGTAATATGGATTACATTTATTTGATAAAATAACATCATTATATAAATCATTGTATACAATGAAGAGATTGATTA TGGGTATTATTACTTCTTAGGTACTACTGTAGCTATAACAATAATGA ] [-] EMBL AI976695 [ AGATGTGTTTTCTTATTGTAAGTAAGAATATGAATGATAGAAAGAAAGAAAAGAGAAAGAAAAATCGATATAAAGAATATTTAAAGTAAACAAATA CACAAATGTGTGTAGAAAAAATAAATAAAGAAAAACAATGGACATTCAATTCCATTAGAAACATAAAACAGATATGTATATATGTATATATATATAAATGAAGATTACATAGAAATATAATTGAGCAATTCAAAAGAAAAAAAGGTTATACAATTACAAAGATATTACGTAATATGGATTACATTTATTTGATAAAATAACATCATTATATAAATCATTGTATACAATGAAGAGATTGATTA TGGGTATTATTACTTCTTAGGTACTACTGTAGCTATAACAATAATGA ] [-] EMBL BF936059 [ ATAAACCAGATATGTATATATGTATATATATATAAATGAAGATTACATAGAAATATAATTGAGCAATTCAAAAGAAAAAAAGGTTATACAATTACAAAGATATTACGTAATATGGATTACATTTATTTGATAAAATAACATCATTATATAAATCATTGTATACAATGAAGAGATTGATTA TGGGTATTATTACTTCTTAGGTACTACTGTAGCTATAACAATAATGATTATAATTACTACAATAGCACAACAAACT CCAATAATAATGAATTTTTTTTTCCGAGATTTTTTCTTGTATACAACTGCTTTTTTAGTTTCCTGTCGAGCCTCAGCAACATAATCCTGTGTTTGTTTAACGTTGACATCGATTCGATCAACGAGTTCACCTTGTGTTTCAATTAATGCAGCCATATCGGTAAATAAACCGTGTAATTCTCGAATACTCTTTTCTAATTTCATTATATCTTCATGACGTGCTTCAATATCGGCTAGATTTTGACGTG ] [-] EMBL CD162104 [ TAACGTTGACATCGATTCGATCAACGAGTTCACCTTGTGTTTCAATTAATGCAGCCATATCGGTAAATAAACCGTGTAATTCTCGAATACTCTTTTCTAATTTCATTATATCTTCATGACGTGCTTCAATATCGGCTAGATTTTGACGTGCTTGTTGAGTATCTGTTATAATTCCTTGAGTAAAAATCTGTGGATTTCCAGATTCAAGCATATTTTCTAGTTCATTATCTGTAACTGATCGTTGAGCAACTTCTAATTGACGTTTCAATAAAGCTTTACAACGTTCTTTATGCTCAACCTGTATACGACCATATTGATGCATAATGGTTGTGATAGTTTTAGATAAAGTGAGGAACTGGGTTTTACGAATACGTAAATCAGCGGATGTAGCATCATTAGCTTCTTGTTCTCTGATTGTTTGTTCCAATGATTTTAGCTTAAGTCGAATTTCTTTAGCTGAACGTGTAATACTTTCATTTAATTCTTCTAGTTGTGTTT ] [-] EMBL CD161919 [ ACGTAAATCAGCGGATGTAGCATCATTAGCTTCTTGTTCTCTGATTGTTTGTTCCAATGATTTTAGCTTAAGTCGAATTTCTTTAGCTGAACGTGTAATACTTTCATTTAATTCTTCTAGTTGTGTTTTCGTTTTTGGATTTTGTTGAAGTGCTGACAAAATTTCACCATGTTTTGTTTTAACTTGACTTATTTCTATGCGAGTCTTTTCAATTTCTCTTCGAATCCATTCAACTTCACTAAAGAAAAGATCCATTTGAGAACCACCATCTACTACCACGGCTTCTTCTGCTGATGGGAGATTTGGTAGTTCATTATTCTGTCGTAGGGACTGCGAATAAATCTTTGGCCATTGTTTGCCGTATTAATTAATACTTTATATTGTATACAAAGACAGTAAAAGTTATAGAAGTAGAATTAATTTAAAAAAGGAATAAATCCCTGTCATAGAAAATCAATCTTTGAAGGAAATTGTTCCGCAAAACCTTGAAAGAGTTCCAA] [-] EMBL CD161945 [ AAGTTATAGAAGTAGAATTAATTTAAAGAAGGAATAAATCCCTGTCATAGAAAATCAATCTTTGAAGGAAATTGTTCCGCAAAACCTTGAAAGAGTTCCAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||