These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8804#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 946 fasta sequence [TTTGTTGCATGGAGCAAATTTATGACCAAATGTCTTGTTCTATGGATCATCTTGTTAATAATGGTGATGAAATACAACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTCCTATTGAAGGTTCAAACGAAACTTTTCGTCAAAGGCAATCAGACGTTTTTTCTGCACTAACTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTGTACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAGAACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACACAAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACTATGTACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATCCTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACAATCTCGAAATAACACTGAAACTGTACAAGATGACGAAACTTGCCCAACAAATCCACGTCATAACAATCGGATATTGTTTCGTT-AACACGAGGTAAAAAACGAGCTCGTCTCACTGAAGAAAATCTACCAAAACCTGAAGTGCGTCTAGAG-AGTTGTTTCGACACGCCGGATACAGATGAATCACAAAGTTCCACCGACGATTCAATATCTTTGTCTCATAATAGTGAAAGTTCGTGTGCTTCTGTGGCAGTCTTTGTGAATCGACGTCAC-AAGGCCAAATACGTAATCGACATTTAGATAACCCAGTAGATACCGAGCACCAGCCATTTGATGATCAACCGGCG-ATGCTGTTGCAGTT-ACTCAGATTATGATGCT--AGGTGATCAAGATCTCGATGTGGATTCTGATGAGTTAGA] [+] EMBL BF936836 [TTTGTTGCATGGAGCAAATTTATGACCAAATGTCTTGTTCTATGGATCATCTTGTTAATAATGGTGATGAAATACAACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTCCTATTGAAGGTTCAAACGAAACTTTTCGTCAAAGGCAATCAGACGTTTTTTCTGCACTAACTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTGTACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAGAACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACACAAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACTATGTACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATCCTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACAATCTCGAAATAACACTGAAACTGTACAAGATGACGAAACTTGCCCAACAAATCCACGTCATAACAATCGGATATTGTTTCGTT AACACGAGGTAAAAAACGAGCTCGTCTCACTGAAGAAAATCTACCAAAACCTGAAGTGCGTCTAGAGAAGTTGTTTC ] [+] EMBL AI976429 [TTTGTTGCATGGAGCAAATTTATGACCAAATGTCTTGTTCTATGGATCATCTTGTTAATAATGGTGATGAAATACAACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTCCTATTGAAGGTTCAAACGAAACTTTTCGTCAAAGGCAATCAGACGTTTTTTCTGCACTAACTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTGTACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAGAACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACACAAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACTATGTACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATCCTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACAATCTCGA ] [+] EMBL CD083852 [ cacgaggATGTCTTGTTCTATGGATCATC TGTTAATAATGGTGATGAAATACAACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTCCTATTGAAGGTTCAAACGAAACTTTTCGT ] [-] EMBL CD195595 [ AACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTCCTATTGAAGGTTCAAACGAAACTTTTCGTCAAAGGCAATCAGACGTTTTTTCTGCACTAACTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTGTACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAGAACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACACAAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACTATGTACATCGAGATCCCAGTAAATGGACACAT ] [+] EMBL CD083853 [ CTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTGTACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAGAACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACACAAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACTATGTACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATCCTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACA ] [-] EMBL CD062553 [ TACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATCCTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACAATCTCGAAATAACACTGAAACTGTACAAGATGACGAAACTTGCCCAACAAATCCACGTCATAACAATCGGATATTGTTTCGTTCAACACGAGGTAAAAAACGAGCTCGTCTCACTGAAGAAAATCTACCAAAACCTGAAGTGCGTCTAGAG AGTTGTTTCGACACGCCGGATACAGATGAATCACAAAGTTCCACCGACGATTCAATATCTTTGTCTCATAATAGTGAAAGTTCGTGTGCTTCTGTGGCAGTCTTTGTGAATCGACGTCAC AAGGCCAAATACGTAATCGACATTTAGATAACCCAGTAGATACCGAGCACCAGCCATTTGATGATCAACCGGCG ATGCTGTTGCAGTT ACTCAGATTATGATGCT AGGTGAT ] [-] EMBL CD141063 [ AAAAACGAGCTCGTCTCACTGAAGAAAATCTACCAAAACCTGAAGTGCGTCTAGAG AGTTGTTTCGACACGCCGGATACAGATGAATCACAAAGTTCCACCGACGATTCAATATCTTTGTCTCATAATAGTGAAAGTTCGTGTGCTTCTGTGGCAGTCTTTGTGAATCGACGTCACAAAGGCCAAATACGTAATCGACATTTAGATAACCCAGTAGATACTGAGCACCAGCCATTTGATGATCAACCGGCGAATGCTGTTGCAGTTAACTCAGATTATGATGATAAAGGTGATCAAGATCTCGATGTGGATTCTGATGAGTTAGA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||