These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8809#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 504 fasta sequence [AGATTGAGCAA-CTTCCTTTTCAAGCAT-CCCTCTTATTGTTTCTCTTAGGCTTTTAACTTCAGATTTCAGAGACTCGGACAGCCTAATACGGTATTCTATTTGCGTTCGTAGTTGAATTATAGCATCTTGAGGAGGTAGATCATGTAATTGACTA-AGCTCTGCATGATCGGTCATGACCATCATTGTTGTAGCCATTTTATCGGCTTCATCGAAGGGATGGTGATGATTAGGAGCATGCGGAGTACTGGTAACTGGACTGTTGACAGGACGTTGAGTTGTCGCTGAAGCTAACCGTGATCGAGCAATAGCAGCTTCCTTT-CGAACGCGAAGTAGTTCTTCTCTCAAATCATCGCGAAGCCGACTACCCTCATTGATGATATTCTGATAGTGAGTTATTGTATCTTTGTGCATTTCCAAATCCCTTCGCAACTGTTCACACTCGAGTTTGTGGCGAAGTCCAGCTTGAAGCTGAGCACGCATACCGACAACCGAATTTCGGAGACG] [+] EMBL CD161701 [AGATTGAGCAANCTTCCTTTTCAAGCATCCCCTCTTATTGTTTCTCTTAGGCTTTTAACTTCAGATTTCAGAGACTCGGACAGCCTAATACGGTATTCTATTTGCGTTTGTAGTTGAATTATAGCATCTTGAGGAGGTAGATCATGTAATTGACTA AGCTCTGCATGATCGGTCATGACCATCATTGTTGTAGCCATTTTATCGGCTTCATCGAAGGGATGGTGATGATTAGGAGCATGCGGAGTACTGGTAACTGGACTGTTGACAGGACGTTGAGTTGTCGCTGAAGCTAACCGTGATCGAGCAATAGCAGCTTCCTTT CGAACGCGAAGTAGTTCTTCTCTCANATCATCGCGAAGCCGACTACCCTCATTGATGATATTCTGATAGTGAGTTATTGTATCTTTGTGCATTTCCAAATCCCTTCGCATCTGTTCACACTCGAGTTTGTGGCGAAGTCCAGCTTGAAGCTGNGCTCGCCTACCGACAACCGTTTTTCGGAGACG] [+] EMBL CD161730 [ GATTGAGCAA CTTCCTTTTCAAGCAT CCCTCTTATTGTTTCTCTTAGGCTTTTAACTTCAGATTTCAGAGACTCGGACAGCCTAATACGGTATTCTATTTGCGTTCGTAGTTGAATTATAGCATCTTGAGGAGGTAGATCATGTAATTGACTA AGCTCTGCATGATCGGTCATGACCATCATTGTTGTAGCCATTTTATCGGCTTCATCGAAGGGATGGTGATGATTAGGAGCATGCGGAGTACTGGTAACTGGACTGTTGACAGGACGTTGAGTTGTCGCTGAAGCTAACCGTGATCGAGCAATAGCAGCTTCCTTTNCGAACGCGAAGTAGTTCTTCTCTCAAATCATCGCGAAGCCGACTACCCTCATTGATGATATTCTGATAGTGAGTTATTGTATCTTTGTGCATTTCCAAATCCCTTCGCAACTGTTCACACTCGAGTTTGTGGCGAAGTCCAGCTTGAAGCTGAGCACGCATACCGACAACCGAATTTCGGAG ] [+] EMBL CD161703 [ GATTGAGCAA CTTCCTTTTCAAGCAT CCCTCTTGTTGTTTCTCTTAGGCTTTTAACTTCAGATTTCAGAGACTCGGACAGCCTAATACGGTATTCTATTTGCGTTCGTAGTTGAATTATAGCATCTTGAGGAGGTAGATCATGTAATTGACTA AGCTCTGCATGATCGGTCATGACCATCATTGTTGTAGCCATTTTATCGGCTTCATCGAAGGGATGGTGATGATTAGGAGCATGCGGAGTACTGGTAACTGGACTGTTGACAGGACGTTGAGTTGTCGCTGAAGCTAACCGTGATCGAGCAATAGCAGCTTCCTTT CGAACGCGAAGTAGTTCTTCTCTCAAATCATCGCGAAGCCGACTACCCTCATTGATGATATTCTGATAGTGAGTTATTGTATCTTTGTGCATTTCCAAATCCCTTCGCAACTGTTCACACTCGAGTTTGTGGCGAAGTCCCGCTTGAAGCTGAGCACGCATACCGACAACCGAATTTCGGAG ] [+] EMBL CD161681 [ GATTGAGCAA CTTCCTTTTCAAGCAT CCCTCTTATTGTTTCTCTTAGGCTTTTAACTTCAGATTTCAGAGACTCGGACAGCCTAATACGGTATTCTATTTGCGTTCGTAGTTGAATTATAGCATCTTGAGGAGGTAGATCATGTAATTGACTA AGCTCTGCATGATCGGTCATGACCATCATTGTTGTAGCCATTTTATCGGCTTCATCGAAGGGATGGTGATGATTAGGAGCATGCGGAGTACTGGTAACTGGACTGTTGACAGGACGTTGAGTTGTCGCTGAAGCTAACCGTGATCGAGCAATAGCAGCTTCCTTT CGAACGCGAAGTAGTTCTTCTCTCAAATCATCGCGAAGCCGACTACCCTCATTGATGATATTCTGATAGTGAGTTATTGTATCTTTGTGCATTTCCAAATCCCTTCGCAACTGTTCACACTCGAGTTTGTGGCGAAGTCCAGCTTGAAGCTGAGCACGCATACCGACAACCGAATTTCGGAG ] [+] EMBL CD161677 [ GATTGAGCAA CTTCCTTTTCAAGCAT CCCTCTTATTGTTTCTCTTAGGCTTTTAACTTCAGATTTCAGAGACTCGGACAGCCTAATACGGTATTCTATTTGCGTTCGTAGTTGAATTATAGCATCTTGAGGAGGTAGATCATGTAATTGACTA AGCTCTGCATGATCGGTCATGACCATCATTGTTGTAGCCATTTTAACGGCTTCATCGAAGGGATGGTGATGATTAGGAGCATGCGGAGTACTGGTAACTGGACTGTTGACAGGACGTTGAGTTGTCGCTGAAGCTAACCGTGATCGAGCAATAGCAGCTTCCTTT CGAACGCGAAGTAGTTCTTCTCTCAAATCATCGCGAAGCCGACTACCCTCATTGATGATATTCTGATAGTGAGTTATTGTATCTTTGTGCATTTCCAAATCCCTTCGCAACTGTTCACACTCGAGTTTGTGGCGAAGTCCAGCTTGAAGCTGAGCACGCATACCGACAACCGAATCTCGGAG ] [+] EMBL CD161687 [ GATTGAGCAA CTTCCTTTTCAAGCAT CCCTCTTATTGTTTCTCTTAGGCTTTTAACTTCAGATTTCAGAGACTCGGACAGCCTAATACGGTATTCTATTTGCGTTCGTAGTTGAATTATAGCATCTTGAGGAGGTAGATCATGTAATTGACTA AGCTCTGCATGATCGGTCATGACCATCATTGTTGCCCCCCTTTTATCGGCTTCATCGAAGGGATGGTGATGATTAGGAGCATGCGGAGTACTGGTAACTGGACTGTTGACAGGACGTTGAGTTGTCGCTGAAGCTAACCGTGATCGAGCAATAGCAGCTTCCTTT CGAACGCGAAGTAGTTCTTCTCTCAAATCATCGCGAAGCCGACTACCCTCATTGATGATATTCTGATAGTGAGTTATTGCATCTTTGTGCATTTCCAAATCCCTTCGCAACTGTTCACACTCGAGTTTGCGGCGAAGCCCA ] [+] EMBL CD161724 [ GATTGAGCAA CTTCCTTTTCAAGCAT CCCTCTTATTGTTTCTCTTAGGCTTTTAACTTCAGATTTCAGAGACTCGGACAGCCTACTACGGAATTCTATTTGCGTTCGTAGTTGAATTATACCATCTTGAGGAGGTAGATCATGTAATTGACTACATCTCTGCATGATCGGACATGACCATCATTGct ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||