These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8855#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 456 fasta sequence [CACCAGCAG-CA-ACG-GCA-ACAACAACG-G-GT-AACACTGGTGCTTCT-GCATCAACCT-CATCAAAAGACATCGCCATTCGTCT-GATGAAAAACGA-AGCACTTTACGG-TGTAATGGAATTCGCTAGTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG-ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA-GGTGGAATCGCATCGAATTCAGCTTATT] [-] EMBL CD087856 [CACCACCAG C ACC GCC ACCACCACG G GTCACCAC GGTGGTTTTCGCATC ACCTGCTTCAAAGGACTTCTCCATTCTTCTATATGAAAACCGAGAGCACTTTACGGTTGTAATGGAATTCGTTAGTGGAATTGTCATGAATGTCAAAGAGGGAAATAGTATTTCTCTTGAACGTGAAACCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA GGTGGCATCG ] [-] EMBL CD087798 [ CAGCAG CA ACG GCA ACAACAACG G GT AACACTGGTGCTTCT GCATCAACCT CATCAAAAGACATCGCCATTCGTCT GATGAAAAACGA AGCACTGTACGG TGTAATGGAATTCGCTAGTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAATGGTGGca ] [+] EMBL CD087924 [ CAGCAG CA ACG GCA ACAACAACG G GT AACACTGGTGCTTCT GCATCAACCT CATCAAAAGACATCGCCATTCGTCT GATGAAAAACGA AGCACTTTACGG TGTAATGGAATTCGCTAGTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAACGCANATTCATCATCAAATACGAATCACAcg ] [+] EMBL CD087799 [ GCAGCCATACGTGCATACAACGACGCGCGT AACAGAGGTGCTTCT GCATCAACCT CATCAAAAGACATCGCCATTCGTCT GATGAAAAACGA AGCACTTTACGG TGTAATGGAATTCGCTAGTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA GGTGGAATCGCATCGAATTCAGCTTAT ] [+] EMBL CD087812 [ at ACAACAACG G GT ACACTGGTGCTTCT GCATCAACCT CATCAAAAGACATCGCCATTCGTCT GATGAAAAACGA AGCACTTTACGG TGTAATGGAATTCGCTAGTGGAATTGTCATGGATGTCAAAGATGGAAATAGTATTTCTCTTGAACGTGAAATCAATCCGTTTACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA GGTGGAATCGCATCGAATTCAGCTTAT ] [-] EMBL CD087987 [ ACTTATCGACCACCGACTGGCGTCGATCCCAATGCAAATTCATCATCAAATACG ATCACAACGTCTTTGGGTGTTGTTCTACCGAAAACTGGTGCTGGAAGTGAATACGGACGAGAACAAAAGGAAGCATTGAAAAGAAAACGTTATGCATCGAAAGGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA GGCGCAAgagcc ] [-] EMBL CD087899 [ ATCGAAAAGAACGAATTTAGAAGATTTGCCCTGGTTAATGACCAATCGCATCGCCAATGAAAAGAAACCCAAATATTTTCGAGGAATGAAAAAA GGTGGAATCGCATCGAATTCAGCTTATT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||