Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8874 cluster # 8874       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8874#0 length = 541 sequences # 7  

consensusID : consensus_8874#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 541
fasta sequence
                              [GCTTTTTGAAAATGGCATTTACGCGATAAGGCTTCTATCTTCACCCCTAATTGAGTTTATTCAAGTCCAATCAACTCCAAAAGTATCAATTTTTAGAGACTAACTTGTCATCTGAGCTTTTTGA-GGACGTCGATTTAGTTCGAATTAGTTGATTCCGACAAATCAGCGTGTGTACAAATGTCTAGTACATTATGGAATCCGATTTCCCCCATACTGAGTAGGGCGTTTAGTTGCCGTAGTTTCAACTTAATTCGACACTTCGAGCCTCAGACACCAAAAGAAGTCGGACCAAATAATCGGAACAATCGCCTTCCTAGGTCGTATGAATTGATGATGCGAACCATCCACAATAGAATAGGTCCGACCCAGTTACCTCGCAAAAAGCTGTACACCATATTGCTTTCTCGTCGGGAGAACAAAATGTCGGAATCAGTTAGAATGTCCACTCCTGAAGGGCGGGCGCTCATTTTTAAGAGACTTATTGATAAACAGAAACGTTTGTGGCCGCATAACTT-GTAGTTTGTTAGCTTCAATTTCCCGG]

[-] EMBL CD098485             [GCTTTTTGAAAATGGCATTTACGCGATAAGGCTTCTATCTTCACCCCTAATTGAGTTTATTCAAGTCCAATCAACTCCAAAAGTATCAATTTTTAGAGACTAACTTGTCATCTGAGCTTTTTGA GGACGTCGATTTAGTTCGAATTAGTTGATTCCGACAAATCAGCGTGTGTACAAATGTCTAGTACATTATGGAATCCGATTTCCCCCATACTGAGTAGGGCGTTTAGTTGCCGTAGTTTCAACTTAATTCGACACTTCGAGCCTCAGACACCAAAAGAAGTCGGACCAAATAATCGGAAC                                                                                                                                                                                                                                               ]
[+] EMBL AI976087             [                        GATAAGGCTTCTATCTTCACCCCTAATTGAGTTTATTCAAGTCCAATCAACTCCAAAAGTATCAATTTTTAGAGACTAACTTGTCATCTGAGCTTTTTGA GGACGTCGATTTAGTTCGAATTAGTTGATTCCGACAAATCAGCGTGTGTACAAATGTCTAGTACATTATGGAATCCGATTTCCCCCATACTGAGTAGGGCGTTTAGTTGCCGTAGTTTCAACTTAATTCGACACTTCGAGCCTCAGACACCAAAAGAAGTCGGACCAAATAATCGGAACAATCGCCTTCCTAGGTCGTATGAATTGATGATGCGAACCATCCACAATAGAATAGGTCCGACCCAGTTACCTCGCAAAAAGCTGTACACCATATTGCTTTCTCGTCGGGAGAACAAAATGTCGGAATCAGTTAGAATGTCCACTCCTGAAGGGCGGGCGCTCATTTTTAAGAGACTTATTGATAAACAGAAACGTTTGTGGCCGCATAACTT GTAGTTTGTTAGCTTCAATTTCCCGG]
[+] EMBL AI976322             [                        GATAAGGCTTCTATCTTCACCCCTAATTGAGTTTATTCAAGTCCAATCAACTCCAAAAGTATCAATTTTTAGAGACTAACTTGTCATCTGAGCTTTTTGA GGACGTCGATTTAGTTCGAATTAGTTGATTCCGACAAATCAGCGTGTGTACAAATGTCTAGTACATTATGGAATCCGATTTCCCCCATACTGAGTAGGGCGTTTAGTTGCCGTAGTTTCAACTTAATTCGACACTTCGAGCCTCAGACACCAAAAGAAGTCGGACCAAATAATCGGAACAATCGCCTTCCTAGGTCGTATGAATTGATGATGCGAACCATCCACAATAGAATAGGTCCGACCCAGTTACCTCGCAAAAAGCTGTACACCATATTGCTTTCTCGTCGGGAGAACAAAATGTCGGAATCAGTTAGAATGTCCACTCCTGAAGGGCGGGCGCTCATTNTTAAGAGACTTATTGATAAACAGAAACGTTTGTGGCCGCAT ACTTGGTAGTTTGTTAGCTTCAATTTC    ]
[+] EMBL BF936082             [                        GATAAGGCTTCTATCTTCACCCCTAATTGAGTTTATTCAAGTCCAATCAACTCCAAAAGTATCAATTTTTAGAGACTAACTTGTCATCTGAGCTTTTTGA GGACGTCGATTTAGTTCGAATTAGTTGATTCCGACAAATCAGCGTGTGTACAAATGTCTAGTACATTATGGAATCCGATTTCCCCCATACTGAGTAGGGCGTTTAGTTGCCGTAGTTTCAACTTAATTCGACACTTCGAGCCTCAGACACCAAAAGAAGTCGGACCAAATAATCGGAACAATCGCCTTCCTAGGTCGTATGAATTGATGATGCGAACCATCCACAATAGAATAGGTCCGACCCAGTTACCTCGCAAAAAGCTGTACACCATATTGCTTTCTCGTCGGGAGAACAAAATGTCGGAATCAGTTAGAATGTCCACTCCTGAAGGGCGGGCGCTCATTTTTAAGAGACTTATTGATAAACAGAAACGTTTGTGGCCGCA                                 ]
[-] EMBL CD112190             [                            AGGCTTCTATCTTCACCCCTAATTGAGTTTATTCAAGTCCAATCAACTCCAAAAGTATCAATTTTTAGAGACTAACTTGTCATCTGAGCTTTTTGA GGACGTCGATTTAGTTCGAATTAGTTGATTCCGACAAATCAGCGTGTGTACAAATGTCTAGTACATTATGGAATCCGATTTCCCCCATACTGAGTAGGGCGTTTAGTTGCCGTAGTTTCAACTTAATTCGACACTTCGAGCCTCAGACACCAAAAGAAGTCGGACCAAATAATCGGTACTATCG                                                                                                                                                                                                                                          ]
[-] EMBL CD165049             [                                                                  CCAATCAACTCCAAAAGTATCAATTTNTAGAGACTAACTTGTCATCTGAGC TTTTGAGGGACGTCGATNTAGTTCGAATTAGTTGATTCCGACAAATCAGCGTGTGTACAAATGTCTAGTACATTATGGAATCCGATTTCCCCCATACTGAGTAGGGCGTTTAGTTGCCGTAGTTTCAACTTAATTCGACACTTCGAGCCTCAGACACCAAAAGAAGTCGGACCAAATAATCGGAACAATCGCCTTCCTAGGTCGTATGAATTGATGATGCGAACCATCCACAATAGAATAGGTCCGACCCAGTTACCTCGCAAAAAGCTGTACACCATATTGCTTCCTCGTCGGGAG                                                                                                                                ]
[+] EMBL BF936978             [                                                                                                       CTTGTCATCTGAGCTTTTTGA GGACGTCGATTTAGTTCGAATTAGTTGATTCCGACAAATCAGCGTGTGTACAAATGTCTAGTACATTATGGAATCCGATTTCCCCCATACTGAGTAGGGCGTTTAGTTGCCGTAGTTTCAACTTAATTCGACACTTCGAGCCTCAGACACCAAAAGAAGTCGGACCAAATAATCGGAACAATCGCCTTCCTAGGTCGTATGAATTGATGATGCGAACCATCCACAATAGAATAGGTCCGACCCAGTTACCTCGCAAAAAGCTGTACACCATATTGCTTTCTCGTCGGGAGAACAAAATGTCGGAATCAGTTAAAATGTCCACTCCTGAAGGGCGGG                                                                                  ]


>consensus_8874#0 GCTTTTTGAAAATGGCATTTACGCGATAAGGCTTCTATCTTCACCCCTAATTGAGTTTAT TCAAGTCCAATCAACTCCAAAAGTATCAATTTTTAGAGACTAACTTGTCATCTGAGCTTT TTGAGGACGTCGATTTAGTTCGAATTAGTTGATTCCGACAAATCAGCGTGTGTACAAATG TCTAGTACATTATGGAATCCGATTTCCCCCATACTGAGTAGGGCGTTTAGTTGCCGTAGT TTCAACTTAATTCGACACTTCGAGCCTCAGACACCAAAAGAAGTCGGACCAAATAATCGG AACAATCGCCTTCCTAGGTCGTATGAATTGATGATGCGAACCATCCACAATAGAATAGGT CCGACCCAGTTACCTCGCAAAAAGCTGTACACCATATTGCTTTCTCGTCGGGAGAACAAA ATGTCGGAATCAGTTAGAATGTCCACTCCTGAAGGGCGGGCGCTCATTTTTAAGAGACTT ATTGATAAACAGAAACGTTTGTGGCCGCATAACTTGTAGTTTGTTAGCTTCAATTTCCCG G



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)