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Schistosoma mansoni
cluster # 8881 cluster # 8881       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8881#0 length = 1052 sequences # 7  

consensusID : consensus_8881#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1052
fasta sequence
                              [GCCGTTGAGGATAGCGAATTAGAGGGAGAGTCAGAGGACATGAGACTTGACGATGATGAAGAGTTTGAGGGTTTGTCACCCAATCAACCAATTCTAAATACCGAC-AAACAAAGAGTGGTAAACGAAATCTAATAATTGCAAAGGTTCCACATCATCTTACTCGTTCGTGGGACAATTTTCGTTTGGAAATACTTTTTGTACTAGCCTTAATGATATATACCTTGAATTTTTTAATTGGACGTTCTAAAAATACTCAGTTGGCGAATACTTGGTTTTCTGCTCATCAACCATTATTAGAAACTAATTTTGCTGTAGTTGGTGACGATGGTCTAGCTGAACCTGGAACTGGGACGTTAATGAAGGAATCAGAACATTTATATTCTCTTTGGTGTACGGGAAGTGTACACTGTGATGCAATGCTAATTGAGTTGCGCTTAGTTAAGCGTCAATGTTTATTCTTCGCAATCGCCAACTGGATAAGACCGGTTCATGATAGCATTGTAGTGAAAGTAATTATGGACGATTCTGAAATGGATGGGTGGGTCTTGGCGGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCAAAAGATCACCAAGATTTAGCTGTATACTGTCCAGACAAACGTGGACAACGGCATTCATATCTGCCAGAATCTTTCATGCTTTTATGTGAGATTCCAGAAGTTGTCCCGGCAATTTTCAATCCTCTTG-TTGTAAATTTCTGAACGATTTTGAAGAATCAATCGAATATTTATTTTTCTCCGATCAGTATAGTGGACCAAAACCTCCTCAAGAGGATACAACTACTCCTACAAAACCTCCAGTTACACAGAAAGCTCTTATTTTTGCTTTGAGGTATGTTCCAACAACAACAAAGTCAAAATCCTTCTCAACATCACTTACATCATCAAATAATAATGCTAATGGTAATCTTAATCAACATCATCAGCAACCAATCGAATCGGCTACTGCCTTGTTCCATTTTATTTTCTATGTGATTGAAAAAGTTCGGCGATTTCGTCTTAGTAAAGAGGGCAAGGCTAAATCTGAAC]

[+] EMBL CD155501             [GCCGTTGAGGATAGCGAATTAGAGGGAGAGTCAGAGGACATGAGACTTGACGATGATGAAGAGTTTGAGGGTTTGTCACCCAATCAACCAATTCTAAATACCGACAAAACAAAGAGTGGTAAACGAAATCTAATAATTGCAAAGGTTCCACATCATCTTACTCGTTCGTGGGACAATTTTCGTTTGGAAATACTTTTTGTACTAGCCTTAATGATATATACCTTGAATTTTTTAATTGGACGTTCTAAAAATACTCAGTTGGCGAATACTTGGTTTTCTGCTCATCAACCATTATTAGAAACTAATTTTGCTGTAGTTGGTGACGATGGTCTAGCTGAACCTGGAACTGGGACGTTAATGAAGGAATCAGAACATTTATATTCTCTTTGGTGTACGGGAAGTGTACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD095862             [                                               TGACGATGATGAAGAGTTTGAGGGTTTGTCACCCAATCAACCAATTCTAAATACCGAC AAACAAAAAGTGGTAAACGAAATCTAATAATTGCAAAGGTTCCACATCATCTTACTCGTTCGTGGGACAATTTTCGTTTGGAAATACTTTTTGTACTAGCCTTAATGATATATACCTTGAATTTTTTAATTGGACGTTCTAAAAATACTCAGTTGGCGAATACTTGGTTCTCTGCTCATCAACCATTATTAGAAACTAATTTTGCTGTAGTTGGTGACGATGGTCTAGCTGAACCTGGAACTGGGACGTTAATGAAGGAATCAGAACATTTATATTCTCTTTAGTGTACGGGAAGTGTACACTGTGATGCAATGCTAATTGAGTTGCGCTTAGTTAAGCGTCAATGTTTATTCTTCGCAATCGCCAACTGGATAAGACCGGTTCATGATAGCATTGTAGTGAAAGTAATTATGGACGATTCTGAAATGGATGGGTGGGTCTTGGCGGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCANAAGATCACCAAGATTTAGCTGTATACTGTCCAGACAAACGTGGACAACGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD155348             [                                                                                                                                                                             CAATTTTCGTTTGGAAATACTTTTTGTACTAGCCTTAATGATATATACCTTGAATTTTTTAATTGGACGTTCTAAAAATACTCAGTTGGCGAATACTTGGTTTTCTGCTCATCAACCATTATTAGAAACTAATTTTGCTGTAGTTGGTGACGATGGTCTAGCTGAACCTGGAACTGGGACGTTAATGAAGGAATCAGAACATTTATATTCTCTTTGGTGTACGGGAAGTGTACACTGTGATGCAATGCTAATTGAGTTGCGCTTAGTTAAGCGTCAATGTTTATTCTTCGCAATCGCCAACTGGATAAGACCGGTTCATGATAGCATTGTAGTGAAAGTAATTATGGACGATTCTGAAATGGATGGGTGGGTCTTGGCGGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCAAAAGATCACCAAGATTTAGCTGTATACTGTCCAGACCAACGTGGACAACGGCATTCATATCTGCC                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD187627             [                                                                                                                                                                                                                                                                                                                                                       GAACTGGGACGTTAATGAAGGAATCACAACATTTATATTCTCTTTGGTGTACGGGAAGTGTACACTGTGATGCAATGCTAATTGAGTTGCGCTTAGTTAAGCGTCAATGTTTATTCTTCGCAATCGGCAACTGGATAAGACCCGTTCATGATAGCATTGGAGTGAAAGTAATTATGGACCATTCTGAAATGGATGGGTGGGTCTTGGCGGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCAAAAGATCACCAAGATTTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD128152             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCAAAAGATCACCAAGATTTAGCTGTATACTGTCCAGACAAACGTGGACAACGGCATTCATATCTGCCAGAATCTTTCATGCTTTTATGTGAGATTCCAGAAGTTGTCCCGGCAATTTTCAATCCTCTTG TTGTAAATTTCTGAACGATTTTGAAGAATCAATCGAATATTTATTTTTCTCCGATCAGTATAGTGGACCAAAACCTCCTCAAGAGGATACAACTAC                                                                                                                                                                                                                                                     ]
[-] EMBL CD153805             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTGTCCAGACAAACGTGGACAACGGCATTCATATCTGCCAGAATCTTTCATGCTTTTATGTGAGATTCCAGAAGTTGTCCCGACAATTTTCAATCCTCTTGTTTGTAAATTTCTGAACGATTTTGAAGAATCAATCGAATATTTATTTTTCTCCGATCAGTATAGTGGACCAAAACCTCCTCAAGAGGATACAACTACTCCTACAAAACCTCCAGTTACACAGAAAGCTCTTATTTTTGCTTTGAGGTATGTTCCAACAACAACAAAGTCAAAATCCTTCTCAACATCACTTACATCATCAAATAATAATGCTAATGGTAATCTTAATCAACATCATCAGCAACCAATCGAATCGGCTACTGCCTTGTTCCATTTTATTTTCTATGTGATTGAAAAAGTTCGGCGATTTCGTCTTAGTAAAGAGGGCAAGGCTAAATCTGAAC]
[-] EMBL CD154531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCCAGAAGTTGTCCCGGCAATTTTCAATCCTCTTGTTTGTAAATTTCTGAACGATTTTGAAGAATCAATCGAATATTTATTTTTCTCCGATCAGTATAGTGGACCAAAACCTCCTCAAGAGGATACAACTACTCCTACAAAACCTCCAGTTACACAGAAAGCTCTTATTTTTG                                                                                                                                                                                                            ]


>consensus_8881#0 GCCGTTGAGGATAGCGAATTAGAGGGAGAGTCAGAGGACATGAGACTTGACGATGATGAA GAGTTTGAGGGTTTGTCACCCAATCAACCAATTCTAAATACCGACAAACAAAGAGTGGTA AACGAAATCTAATAATTGCAAAGGTTCCACATCATCTTACTCGTTCGTGGGACAATTTTC GTTTGGAAATACTTTTTGTACTAGCCTTAATGATATATACCTTGAATTTTTTAATTGGAC GTTCTAAAAATACTCAGTTGGCGAATACTTGGTTTTCTGCTCATCAACCATTATTAGAAA CTAATTTTGCTGTAGTTGGTGACGATGGTCTAGCTGAACCTGGAACTGGGACGTTAATGA AGGAATCAGAACATTTATATTCTCTTTGGTGTACGGGAAGTGTACACTGTGATGCAATGC TAATTGAGTTGCGCTTAGTTAAGCGTCAATGTTTATTCTTCGCAATCGCCAACTGGATAA GACCGGTTCATGATAGCATTGTAGTGAAAGTAATTATGGACGATTCTGAAATGGATGGGT GGGTCTTGGCGGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCAAAAGATCACCAAGATT TAGCTGTATACTGTCCAGACAAACGTGGACAACGGCATTCATATCTGCCAGAATCTTTCA TGCTTTTATGTGAGATTCCAGAAGTTGTCCCGGCAATTTTCAATCCTCTTGTTGTAAATT TCTGAACGATTTTGAAGAATCAATCGAATATTTATTTTTCTCCGATCAGTATAGTGGACC AAAACCTCCTCAAGAGGATACAACTACTCCTACAAAACCTCCAGTTACACAGAAAGCTCT TATTTTTGCTTTGAGGTATGTTCCAACAACAACAAAGTCAAAATCCTTCTCAACATCACT TACATCATCAAATAATAATGCTAATGGTAATCTTAATCAACATCATCAGCAACCAATCGA ATCGGCTACTGCCTTGTTCCATTTTATTTTCTATGTGATTGAAAAAGTTCGGCGATTTCG TCTTAGTAAAGAGGGCAAGGCTAAATCTGAAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)