These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8881#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1052 fasta sequence [GCCGTTGAGGATAGCGAATTAGAGGGAGAGTCAGAGGACATGAGACTTGACGATGATGAAGAGTTTGAGGGTTTGTCACCCAATCAACCAATTCTAAATACCGAC-AAACAAAGAGTGGTAAACGAAATCTAATAATTGCAAAGGTTCCACATCATCTTACTCGTTCGTGGGACAATTTTCGTTTGGAAATACTTTTTGTACTAGCCTTAATGATATATACCTTGAATTTTTTAATTGGACGTTCTAAAAATACTCAGTTGGCGAATACTTGGTTTTCTGCTCATCAACCATTATTAGAAACTAATTTTGCTGTAGTTGGTGACGATGGTCTAGCTGAACCTGGAACTGGGACGTTAATGAAGGAATCAGAACATTTATATTCTCTTTGGTGTACGGGAAGTGTACACTGTGATGCAATGCTAATTGAGTTGCGCTTAGTTAAGCGTCAATGTTTATTCTTCGCAATCGCCAACTGGATAAGACCGGTTCATGATAGCATTGTAGTGAAAGTAATTATGGACGATTCTGAAATGGATGGGTGGGTCTTGGCGGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCAAAAGATCACCAAGATTTAGCTGTATACTGTCCAGACAAACGTGGACAACGGCATTCATATCTGCCAGAATCTTTCATGCTTTTATGTGAGATTCCAGAAGTTGTCCCGGCAATTTTCAATCCTCTTG-TTGTAAATTTCTGAACGATTTTGAAGAATCAATCGAATATTTATTTTTCTCCGATCAGTATAGTGGACCAAAACCTCCTCAAGAGGATACAACTACTCCTACAAAACCTCCAGTTACACAGAAAGCTCTTATTTTTGCTTTGAGGTATGTTCCAACAACAACAAAGTCAAAATCCTTCTCAACATCACTTACATCATCAAATAATAATGCTAATGGTAATCTTAATCAACATCATCAGCAACCAATCGAATCGGCTACTGCCTTGTTCCATTTTATTTTCTATGTGATTGAAAAAGTTCGGCGATTTCGTCTTAGTAAAGAGGGCAAGGCTAAATCTGAAC] [+] EMBL CD155501 [GCCGTTGAGGATAGCGAATTAGAGGGAGAGTCAGAGGACATGAGACTTGACGATGATGAAGAGTTTGAGGGTTTGTCACCCAATCAACCAATTCTAAATACCGACAAAACAAAGAGTGGTAAACGAAATCTAATAATTGCAAAGGTTCCACATCATCTTACTCGTTCGTGGGACAATTTTCGTTTGGAAATACTTTTTGTACTAGCCTTAATGATATATACCTTGAATTTTTTAATTGGACGTTCTAAAAATACTCAGTTGGCGAATACTTGGTTTTCTGCTCATCAACCATTATTAGAAACTAATTTTGCTGTAGTTGGTGACGATGGTCTAGCTGAACCTGGAACTGGGACGTTAATGAAGGAATCAGAACATTTATATTCTCTTTGGTGTACGGGAAGTGTACAC ] [+] EMBL CD095862 [ TGACGATGATGAAGAGTTTGAGGGTTTGTCACCCAATCAACCAATTCTAAATACCGAC AAACAAAAAGTGGTAAACGAAATCTAATAATTGCAAAGGTTCCACATCATCTTACTCGTTCGTGGGACAATTTTCGTTTGGAAATACTTTTTGTACTAGCCTTAATGATATATACCTTGAATTTTTTAATTGGACGTTCTAAAAATACTCAGTTGGCGAATACTTGGTTCTCTGCTCATCAACCATTATTAGAAACTAATTTTGCTGTAGTTGGTGACGATGGTCTAGCTGAACCTGGAACTGGGACGTTAATGAAGGAATCAGAACATTTATATTCTCTTTAGTGTACGGGAAGTGTACACTGTGATGCAATGCTAATTGAGTTGCGCTTAGTTAAGCGTCAATGTTTATTCTTCGCAATCGCCAACTGGATAAGACCGGTTCATGATAGCATTGTAGTGAAAGTAATTATGGACGATTCTGAAATGGATGGGTGGGTCTTGGCGGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCANAAGATCACCAAGATTTAGCTGTATACTGTCCAGACAAACGTGGACAACGGCA ] [+] EMBL CD155348 [ CAATTTTCGTTTGGAAATACTTTTTGTACTAGCCTTAATGATATATACCTTGAATTTTTTAATTGGACGTTCTAAAAATACTCAGTTGGCGAATACTTGGTTTTCTGCTCATCAACCATTATTAGAAACTAATTTTGCTGTAGTTGGTGACGATGGTCTAGCTGAACCTGGAACTGGGACGTTAATGAAGGAATCAGAACATTTATATTCTCTTTGGTGTACGGGAAGTGTACACTGTGATGCAATGCTAATTGAGTTGCGCTTAGTTAAGCGTCAATGTTTATTCTTCGCAATCGCCAACTGGATAAGACCGGTTCATGATAGCATTGTAGTGAAAGTAATTATGGACGATTCTGAAATGGATGGGTGGGTCTTGGCGGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCAAAAGATCACCAAGATTTAGCTGTATACTGTCCAGACCAACGTGGACAACGGCATTCATATCTGCC ] [+] EMBL CD187627 [ GAACTGGGACGTTAATGAAGGAATCACAACATTTATATTCTCTTTGGTGTACGGGAAGTGTACACTGTGATGCAATGCTAATTGAGTTGCGCTTAGTTAAGCGTCAATGTTTATTCTTCGCAATCGGCAACTGGATAAGACCCGTTCATGATAGCATTGGAGTGAAAGTAATTATGGACCATTCTGAAATGGATGGGTGGGTCTTGGCGGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCAAAAGATCACCAAGATTTAGC ] [-] EMBL CD128152 [ GGTTGGTCGTAAGCGTCGTCTTCAAGCACTAGCAAAAGATCACCAAGATTTAGCTGTATACTGTCCAGACAAACGTGGACAACGGCATTCATATCTGCCAGAATCTTTCATGCTTTTATGTGAGATTCCAGAAGTTGTCCCGGCAATTTTCAATCCTCTTG TTGTAAATTTCTGAACGATTTTGAAGAATCAATCGAATATTTATTTTTCTCCGATCAGTATAGTGGACCAAAACCTCCTCAAGAGGATACAACTAC ] [-] EMBL CD153805 [ CTGTCCAGACAAACGTGGACAACGGCATTCATATCTGCCAGAATCTTTCATGCTTTTATGTGAGATTCCAGAAGTTGTCCCGACAATTTTCAATCCTCTTGTTTGTAAATTTCTGAACGATTTTGAAGAATCAATCGAATATTTATTTTTCTCCGATCAGTATAGTGGACCAAAACCTCCTCAAGAGGATACAACTACTCCTACAAAACCTCCAGTTACACAGAAAGCTCTTATTTTTGCTTTGAGGTATGTTCCAACAACAACAAAGTCAAAATCCTTCTCAACATCACTTACATCATCAAATAATAATGCTAATGGTAATCTTAATCAACATCATCAGCAACCAATCGAATCGGCTACTGCCTTGTTCCATTTTATTTTCTATGTGATTGAAAAAGTTCGGCGATTTCGTCTTAGTAAAGAGGGCAAGGCTAAATCTGAAC] [-] EMBL CD154531 [ TCCAGAAGTTGTCCCGGCAATTTTCAATCCTCTTGTTTGTAAATTTCTGAACGATTTTGAAGAATCAATCGAATATTTATTTTTCTCCGATCAGTATAGTGGACCAAAACCTCCTCAAGAGGATACAACTACTCCTACAAAACCTCCAGTTACACAGAAAGCTCTTATTTTTG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||