These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8906#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 800 fasta sequence [CCTTTTTATTATTTGTAACCCAGTCTGGATGAAGATAGCAGTAGTGGG-A-AAGAAACATGAAATATAGATGAGTTGCCTGGTCGAAACAGACTTTTTCCATCTCTATAACATTCAGTAAAATGCTAGTAGTTTGTC-AACCGAAAAGTATGAGCAAAAGTAGTTGAAAAGATCAATAGTTTTTTAAAGAACAAACACACACACAAAGGACAATGACACAAACATGATACATCATTACTAGTTTTTAAAAAGTGAAGATTAAATGGTTTAACAGAATCTGCTGTACAAAAGAAGAAAGGTAGCAAGAAGTCTTTTCATAGTTTAACTCACACAACTGCCTGAAATGCAGTGCATCAGCAACGTTAACTTGAAACAATAACAGGACTGTCATATACATCTTCATTTTTGGAAAAAAAAGCAACAGTTTCCCCAAAGTAAATGAGTGACGTTTACCTAGGACACATAATGATAAGTGGCAGCGTTACTGGAATCTCTTTTCATATAATCTCGTTCAATTAAATTTTCAATACGTTTCTTCACGTCACTTGCTTTAAGTGGAAA-CTGTAATTGCTTGTAGACTTCTGATAATAATGAATTATGGTCAATAGTTTTGCGCGTTTTCATAATTCGTACAATACAACAATCTACATGAGCAACGCGATCAGCAAACACCCGTTCTTCAGTAGCTACTTGTTCTTGTTCAGTTTCTTTTAGTTGAACCTGATTGAATTTGATACGCGTAAGTCGATGATGAAATTCGGTGTTGAAAATAAACTGATGATTGTTTTCAATCTCTAAATTAC] [+] EMBL CD073194 [CCTTTTTATTATTTGTAACCCAGTCTGGATGAAGATAGCAGTAGTGGGAA AAGAAACATGAAATATAGATGAGTTGCCTGGTCGAAACAGACTTTTTCCATCTCTATAACATTCAGTAAAATGCTAGTAGTTTGTC AACCGAAAAGTATGAGCAAAAGTAGTTGAAAAGATCAATAGTTTTTTAAAGAACAAACACACACACAAAGGACAATGACACAAACATGATACATCATTACTAGTTTTTAAAAAGTGAAGATTAAATGGTTTAACAGAATCTGCTGTACAAAAGAAGAAAGGTAGCAAGAAGTCTTTTCATAGTTTAACTCACACAACTGCCTGAAATGCAGTGCATCAGCAACGTTAACTTGAAACAATAACAGGACTGTCATATACATCTTCATTTTTGGAAAAAAAAGCAACAGTTTCCCCAAAGTAAATGAGTGACGTTTACCTAGGACACATAATGATAAGTGGCAGCGTTACTGGAATCTCTTTTCATATAATCTCGTTCAATTAAATTTTCAATACGTTTCTTCACGTCACTTGCTTTAAGTGGAAA CTGTAATTGCTTGTAGACTTCTGATAATAATGA ] [+] EMBL CD075000 [ CTTTTTAACTTTTGTAACCCAGAATGGATGAAGATAGCAGTAGTGGG A ATTCAACATGAAATATAGATGAGTTGCCTGGTCGAAACAGACTTTTTCCATCTCTATAACATTCAGTAAAATGCTAGTAGTTTGTC AACCGAAAAGTATGAGCAAAAGTAGTTGAAAAGATCAATAGTTTTTTAAAGAACAAACACACACACAAAGGACAATGACACAAACATGATACATCATTACTAGTTTTTAAAAAGTGAAGATTAAATGGTTTAACAGAATCTGCTGTACAAAAGAAGAAAGGTAGCAAGAAGTCTTTTCATAGTTTAACTCACACAACTGCCTGAAATGCAGTGCATCAGCAACGTTAACTTGAAACAATAACAGGACTGTCATATACATCTTCATTTTTGGAAAAAAAAGCAACAGTTTCCCCAAAGTAAATGAGTGACGTTTACCTAGGACACATAATGATAAGTGGCAGCGTTACTGGAATCTCTTTTCATATAATCTCGTTCAATTAAATTTTCAATACGTTTCTTCACGTCACTTGCTTTAAGTGGAAA CTGTAATTGCTTGTAGACTTCTGATAATAATGAATTATGGTCAATAGTTTTGCGCGTTTTCATAATTC ] [+] EMBL CD132637 [ GCAGTAGTGGG AGAAGAAACATGAAATATAGATGAGTTGCCTGGTCGAAACAGACTTTTTCCATCTCTATAACATTCAGTAAAATGCTAGTAGTTTGTCNAACCGAAAAGTATGAGCAAAAGTAGTTGAAAAGATCAATAGTTTTTTAAAGAACAAACACACACACAAAGGACAATGACACAAACATGATACATCATTACTAGTTTTTAAAAAGTGAAGATTAAATGGTTTAACAGAATCTGCTGTACAAAAGAAGAAAGGTAGCAAGAAGTCTTTTCATAGTTTAACTCACACAACTGCCTGAAATGCAGTGCATCAGCAACGTTAACTTGAAACAATAACAGGACTGTCATATACATC ] [+] EMBL CD183650 [ ACTTTTTCCATCTCTATAACATTCAGTAAAATGCTAGTAGCTTGTC AACCGAAAAGTATGAGCAAAAGTAGTTGAAAAGATCAATAGTTTTTTAAAGAACAAACACACACACAAAGGACAATGACACAAACATGATACATCATTACTAGTTTTTAAAAAGTGAAGATTAAATGGTTTAACAGAATCTGCTGTACAAAAGAAGAAAGGTAGCAAGAAGTCTTTTCATAGTTTAACTCACACAACTGCCTGAAATGCAGTGCATCAGCAACGTTAACTTGAAACAATAACAGGACTGTCATATACATCTTCATTTTTGGAAAAAAAAGCAACAGTTTCCCCAAAGTAAATGAG ] [-] EMBL CD081178 [ AGTAAAATGGTAGTAGTTTGTC AGCCGAAAAGTATGAGCAAAAGTAG TGAAAAGATCAATAG TTTTTAAAGAACAAACACACACACAAAGGACAATGACACAAACATGATACATCATTACTAGTTTTTAAAAAGTGAAGATTAAATGGTTTAACAGAATCTGCTGTACAAAAGAAGAAAGGTAGCAAGAAGTCTTTTCATAGTTTAACTCACACAACTGCCTGAAATGCAGTGCATCAGCAACGTTAACTTGAAACAATAACAGGACTGTCATATACATCTTCATTTTTGGAAAAAAAAGCAACAGTTTCCCCAAAGTAAATGAGTGACGTTTACCTAGGACACATAATGATAAGTGGCAGCGTTACTGGAATCTCTTTTCATATAATCTCGTTCAATTAAATTTTCAATACGTTTCTTCACGTCACTTGCTTTAAGTGGAAANCTGTAATTGCTTGTAGACTTCTGATAATAATGAAGTATGGTCAATAGTTAAGCGCGTTTTCATAATT ] [-] EMBL CD078732 [ GGACAATGACACAAACATGATACATCATTACTAGTTTTTAGAAAGTGAAGATTAAATGGTTTAACAGAATCTGCTGTACAAAAGAAGAAAGGTAGCAAGAAGTCTTTTCATAGTTTAACTCACACAACTGCCTGAAATGCAGTGCATCAGCAACGTTAACTTGAAACAATAACAGGACTGTCATATACATCTTCATTTTTGGAAAAAAAAGCAACAGTTTCCCCAAAGTAAATGAGTGACGTTTACCTAGGACACATAATGATAAGTGGCAGCGTTACTGGAATCTCTTTTCATATAATCTCGTTCAATTAAATTTTCAATACGTTTCTTCACGTCACTTGCTTTAAGTGGAAA CTGTAATTGCTTGTAGACTTCTGATAATAATGAATTATGGTCAATAGTTTTGCGCGTTTTCATAATTCGTACAATACAACAATCTACATGAGCAACGCGATCAGCAAACACCCGTTCTTCAGTAGCTACTTGTTCTTGTTCAGTTTCTTTTAGTTGAACCTGATTGAATTTGATACGCGTAAGTCGATGATGAAATTCGGTGTTGAA ] [-] EMBL CD078476 [ AAGATTAAATGGTTTAACAGAATCTGCTGTACAAAAGAAGAAAGGTAGCAAGAAGTCTTTTCATAGTTTAACTCACACAACTGCCTGAAATGCAGTGCATCAGCAACGTTAACTTGAAACAATAACAGGACTGTCATATACATCTTCATTTTTGGAAAAAAAAGCAACAGTTTCCCCAAAGTAAATGAGTGACGTTTACCTAGGACACATAATGATAAGTGGCAGCGTTACTGGAATCTCTTTTCATATAATCTCGTTCAATTAAATTTTCAATACGTTTCTTCACGTCACTTGCTTTAAGTGGAAA CTGTAATTGCTTGTAGACTTCTGATAATAATGAATTATGGTCAATAGTTTTGCGCGTTTTCATAATTCGTACAATACAACAATCTACATGAGCAACGCGATCAGCAAACACCCGTTCTTCAGTAGCTACTTGTTCTTGTTCAGTTTCTTTTAGTTGAACCTGATTGAATTTGATACGCGTAAGTCGATGATGAAATTCGGTATTGAAAATAAACTGATGATTGTTTTCAATCTCTAAATTAC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||