These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8930#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1134 fasta sequence [GTCGGTACATAATCAGGCTTCATTTGCTATACTTCAACTAGCTACTCGAATGCTTGGTCAACCATCTTCTACATCTCCCATTACAAGCGTTAACAAAAACATTAGATGTTATGGTCGCACACGCACAAGAACTATTCACGAAACTTCTCCAGCTACTGTCATAAATGCAGGTTCAGTCAAGACTGTCCAAGATTCACTGAAACCTGGAGATAAACAATGTCATGATCTAAAT-AATGCACTTCGTTAGAAGTTAGTGGTAACGAAGTTGAAATTCAAGAAATTTTCGAACGAAAAATCTTTGATTTAGAGGGGAATGAGATCATGAATGACAATGATGACGATGGGTTTTCAGACGATGTTGAAGATGAAGTTGATGATATTTTGGTCGAAAATGAGGAATCTGCAGTTCATGCTTGGCTCATTTTAGTTCAGCTAACTGCTACTGCCCTCAATAAATGTCAACCGTGGCCTGGAAAGGTTTACCTACTCCGAGCAGCAAGATTATTAGGTGAATTTGCTCTAGAACAACAGAATGTTATCGAAGAACCAGCGAATCAAGACGTTATTCATCAAATGTGGTGTGCCCTCTTGCGCGAAACTCAATCAAGACGAGCTGAAGGTATCAAAAGCGGTTACCAGGCCGAAGCTTTCTTGA-CACTTGCATCGTTCGCCGAAGCATGTGGCATTGATGCAATCGCCGATAATCATCCCTACTCAACTGTTGATGGCAATCTCGAAG-AAAGTTTTTCAA-CGGAATCGCATAGTGAATCTGTCGATCGTCTCACCAAGTTATTTGTGCTGATTATTCCACAGTGGTTAAAACGTGGGAAAAATCCTACACAAAATAAAAGTTTAGAAGTTCGTTACGGATTTCAAACCTATTCAATCTCAACATAATCTTTCTTAAAAGACTTTCAGCTTTTTATTTAGTCATTTTACACTGATAAGTTTGCCATATATGTATTTATAGCTGTTGAGTTGTATTCCTCTAAAGTTTCAAGGCTTTTGTGAGGTTATTCAACGAGTGCTATTTATTCAGTTTTATTGTCTTCGTAATTGCTACATACACTTTAAAAGTAAGTGTCATACTTTCTCGTCTCAAGATTCCATGAACTTACACAACCTGCGTATGTC] [+] EMBL CD163089 [GTCGGTACATAATCAGGCTTCATTTGCTATACTTCAACTAGCTACTCGAATGCTTGGTCAACCATCTTCTACATCTCCCATTACAAGCGTTAACAAAAACATTAGATGTTATGGTCGCACACGCACAAGAACTATTCACGAAACTTCTCCAGCTACTGTCATAAATGCAGGTTCAGTCAAGACTGTCCAAGATTCACTGAAACCTGGAGATAAACAATGTCATGATCTAAATAAATGCACTTCGTTAGAAGTTAGTGGTAACGAAGTTGAAATTCAAGAAATTTTCGAACGAAAAATCTTTGATTTAGAGGGGAATGAGATCATGAATGACAATGATGACGATGGGTTTTCAGACGATGTTGAAGATG AGTTGATGATATTTTGGTCGAAAATGAGGA ] [-] EMBL CD133388 [ atCTGGAGATAAACAATGTCATGATCTAAATAAATGCACTTCGTTAGGAGTTAGTGGTAACGAAGTTGAAATTCAAGAAATTTTCGAACGAAAAATCTTTGATTTAGAGGGGAATGAGATCATGAATGACAATGATGACGATGGGTTTTCAGACGATGTTGAAGATGAAGTTGATGATATTTTGGTCGAAAATGAGGAATCTGCAGTTCATGCTTGGCTCATTTTAGTTCAGCTAACTGCTACTGCCCTCAATAAATGTCAACCGTGGCCTGGAAAGGTTTACCTACTCCGAGCAGCAAGATTATTAGGTGAATTTGCTCTAGAACAACAGAATGTTATCGAAGAACCAGCGAATCAAGACGTTATTCATCAAATGTGGTGTGCCCTCTTGCGCGAAACTCAATCAAGACGAGCTGAAGGTATCAA ] [+] EMBL CD147553 [ ATCTAAAT AATGCACTTCGTTAGAAGTTAGTGGTAACGAAGTTGAAACTCAAGAAATTTTCGAACGAAAAATCTTTGATTTAGAGGGGAATGAGATCATGAATGACAATGATGACGATGGGTTTTCAGACGATGTTGAAGATGAAGTTGATGATATTTTGGTCGAAAATGAGGAATCTGCAGTTCATGCTTGGCTCATTTTAGTTCAGCTAACTGCTACTGCCCTCAATAAATGTCAACCGTGGCCTGGAAAGGTTTACCTACTCCGAGCAGCAAGATTATTAGGTGAATTTGCTCTAGAACAACAGAATGTTATCGAAGAACCAGCGAAT ] [+] EMBL CD187046 [ TCAATAAATGTCAACCGTGGCCTGGAAAGGTTTACCTACTCCGAGCAGCAAGATTATTAGGTGAATTTGCTCTAGAACAACAGAATGTTATCGAAGAACCAGCGAATCAAGACGTTATTCATCAAATGTGGTGTGCCCTTTTGCGCGAAACTCATTCAAGACGAGCTGAAGGTTTCAAAAGCGGTTACCAGGCCGAAGCTTTCTTGAGCACTTGCATCGTTCGCCGAAGCATGTGGCATTGATGCAATCGCCGATGATCATCCCTACTCAACTGTAGATGGCGATCTCGAAG AAAGTTTTTCAAGCGGAATCGCATAGTGAATCTGTCGATCGTCTCACCAAGTTATTTGTGCTGATTAT ] [+] EMBL CD170608 [ CAATCAAGACGAGCTGGAGGTATCAAAAGCGGTTACCAGGCCGAAGCTTTCTTGA CACTTGCATCGTTCGCCGAAGCATGTGGCATTGATGCAATCGCCGATAATCATCCCTACTCAACTGTTGATGGCAATCTCGAAG AAAGTTTTTCAA CGGAATCGCATAGTGAATCTGTCGATCGTCTCACCAAGTTATTTGTGCTGATTATTCCACAGCGGTTAAAACGTGGGAAAAATCCTACACAAAATAAAAGTTTAGAAGTTCGTTACGGATTTCAAACCTATTCAATCTCAACATAATCTTTCTTAAAAGACTTTCAGCTTTTTATTTAGTCATTTTACACTGATAAGTTTGCCATATATGTATTTATAGCTGTTGAGTTGTATTCCTCTAAAGTTTCAAGGCTTTTGTGAGGTTATTCAACGAGTGCTATTTATTCAGTTNTATTGTCTTCGTAATTGCTACATACACTNTAAAAGTAAGTGTCATACTTTCTCGTCTCAAGATTCCATGAACTTACACAACCTGCGTATGTC] [+] EMBL CD170513 [ CAATCAAGACGAGCTGAAGGTATCAAAAGCGGTTACCAGGCCGAAGCTTTCTTGA CACTTGCATCGTTCGCCGAACCATGTGGCATTGATGCAATCGCCGATAATCATCCCTACTCAACTGTTGATGGCAATCTCGAAG AAAGTTTTTCAA CGGAATCGCATAGTGAATCTGTCGATCGTCTCACCAAGTTATTTGTGCTGATTATTCCACAGTGGTTAAAACGTGGGAAAAATCCTACACAAAATAAAAGTTTAGAAGTTCGTTACGGATTTCAAAGCTGGGGGGGGTCAACATAATCTTTCTTAAAAGACTTTCAGCTTTTTATTTAGTCATTTTACACTGATAAGTTTGCCATATATGTATTTATAGCTGTTGAGTTGTATTCCTCTAAAGCTTCAAGGCTTTTGTGAGGTTATTCAACGAGTGCTATTTATTCAGTTTTATTGTCTTCGTAATTGCTACATACACTTTAAAAGTAAGTGTCATACTTTCTCGTCTCAAGATTCCATGAACTTACACAACCTGCGTATGTC] [+] EMBL CD170504 [ CAATCAAGACGAGCTGAAGGTATCAAAAGCGGTTACCAGGCCGAAGCTTTCTTGA CACTTGCATCGTTCGCCGAAGCATGTGGCATTGATGCAATCGCCGATAATCATCCCTACTCAACTGTTGATGGCAATCTCGAAG AAAGTTTTTCAA CGGAATCGCATAGTGAATCTGTCGATCGTCTCACCAAGTTATTTGTGCTGATTATTCCACAGTGGTTAAAACGTGGGAAAAATCCTACACAAAATAAAAGTTTAGAAGTTCGTTACGGATTTCAAACCTATTCAATCTCAACATAATCTTTCTTAAAAGACTTTCAGCTTTTTATTTAGTCATTTTACACTGATAAGTTTGCCATATATGTATTTATAGCTGTTGAGTTGTATTCCTCTAAAGTTTCAAGGCTTTTGTGAGGTTATTCAACGAGTGCTATTTATTCAGTTTTATTGTCTTCGAAATTGCTACATACACTTTAAAAGTAAGTGTCATA ] [+] EMBL CD084320 [ TGGCATTGATGCAATCGCCGATAATCATCCCTACTCAACTGTTGATGGCAATCTCGAAGCAACGTTTTTCAA CGGAATCGCATAGTGAATCTGTCGATCGTCTCACCAAGTT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||