These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8933#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1133 fasta sequence [AGAAGGAGGTGGTGTTTCAAGCATTCTGCTTGGAGTATAGTAAGTACTACGATCGGAATGAGGATAGTCAGTAGCAATTTCAGCATTTAAATTTTCCATAACATCGGTTTGCATAGCAGCGTTTTCACGTAATGGTAGTAACCGCGCTTGAATTTCCTGATCCATTACACTATTTGAGCACCCAGTAAGAGAGGTGTAGTTGCTCGACTGAACGGAGTTCTTGGCTGGCTTTATTGATGAAGAGTGATGTTCATTGAGTGGACCCAACGTTATCTGTTTGGTCTCGTAAGACAGCTTTCGTTCTTGTCTAACTTCGTAGTTGTCACATACTGTACTTGACTGAGGAAGATTGGCTTCTACTGCAGCATTACAGAAGAGACCACCAATGAATGAACTGATGTCATCCTCATCGGTACATGTGTTAACAGACACAAGTTCATGTGTCTGGAGTGTATGAGAGCATGGTTGTGATACAGTGTTCGGCGTATATAACTGTTCAGTTTGTGTTGAGGCCTCCAAGGAAGAATTGCTTACAGGGACTGTGTGAACACTGCAGAAATTTCCTAAATTTGGTTTTAAAACCACTGACGTATCGCTCGAATTTATTGCAGACTCCGAGAGATTAACCTGGAAATTTGGATTCTGAAAAATTTGTGTTGAAATTGTACGAAGAGCCGAAAGAGCGCTTGTATATAAAAAATTCATATTCAAACACCCCAAAGCATTGTTTACATTTTCTACATTCACATCACTTACGTTAGGTACAGGAACTGGTACAATAAGAAGTGGAAGAATTAATGGGCCACATGATCCACTAGGAGGGATAGGATTACGTGTAACACGCAAGCTTGGAATTGATGTATGCTTCGAAGGAGATCTGTTTGGAGTATTTTCGACTTTAGGAATGGAATTAAGAGATAAAGTGTTACTGTGTCCACTTCTTCGGTAATGCTGAAGTAAGTGCTTTTTACTTGAATAAGACCTGAAACAAACTGAACAAGAATATGTTGCTCCACATAGTTT--TTGATGATAGGCATGATATGAGGGAGTAGGGAAGAAATGATTACATTTGTTACACTGGTAACTTTTCTGCATATGAACATGCTGGTAATGCTGCTTTAATCTCCAGTAAG] [-] EMBL AI976803 [AGAAGGAGGTGGTGTTTCAAGCATTCTGCTTGGAGTATAGTAAGTACTACGATCGGAATGAGGATAGTCAGTAGCAATTTCAGCATTTAAATTTTCCATAACATCGGTTTGCATAGCAGCGTTTTCACGTAATGGTAGTAACCGCGCTTGAATTTCCTGATCCATTACACTATTTGAGCACCCAGTAAGAGAGGTGTAGTTGCTCGACTGAACGGAGTTCTTGGCTGGCTTTATTGATGAAGAGTGATGTTCATTGAGTGGACCCAACGTTATCTGTTTGGTCTCGTAAGACAGCTTTCGTTCTTGTCTAACTTCGTAGTTGTCACATACTGTACTTGACTGAGGAAGATTGGCTTCTACTGCAGCATTACAGAAGAGACCACCAATGAATGAACTGATGTCATCCTCATCGGTACATGTGTTAACAGACACAAGTTCATGTGTCTGGAGTGTATGAGAGCATGGTTGTG ] [-] EMBL AI977063 [ AGCATCCTGCTTGGAGTATAGTAAGTACTACGATCGGAATGAGGATAGTCAGTAGCAATTTCAGCATTTAAATTTTCCATAACATCGGTTTGCATAGCAGCGTTTTCACGTAATGGTAGTAACCGCGCTTGAATTTCCTGATCCATTACACTATTTGAGCACCCAGTAAGAGAGGTGTAGTTGCTCGACTGAACGGAGTTCTTGGCTGGCTTTATTGATGAAGAGTGATGTTCATTGAGTGGACCCAACGTTATCTGTTTGGTCTCGTAAGACAGCTTTCGTTCTTGTCTAACTTCGTAGTTGTCACATACTGTACTTGACTGAGGAAGATTGGCTTCTACTGCAGCATTACAGAAGAGACCACCAATGAATGAACTGATGTCATCCTCATCGGTACATGTGTTAACAGACACAAGTTCATGTGTCTGGAGTGTATGAGAGCATGGTTGTG ] [+] EMBL CD069362 [ GGTCTCGTAAGACAGCTTTCGTTCTTGTCTAACTTCGTAGTTGTCACATACTGTACTTGACTGAGGAAGATTGGCTTCTACTGCAGCATTACAGAAGAGACCACCAATGAATGAACTGATGTCATCCTCATCGGTACATGTGTTAACAGACACAAGTTCATGTGTCTGGAGTGTATGAGAGCATGGTTGTGATACAGTGTTCGGCGTATATAACTGTTCAGTTTGTGTTGAGGCCTCCAAGGAAGAATTGCTTACAGGGACTGTGTGAACACTGCAGAAATTTCCTAAATTTGGTTTTAAAACCACTGACGTATCGCTCGAATTTATTGCAGACTCCGAGAGATTAACCTGGAAATTTGGATTCTGAAAAATTTGTGTTGAAATTGTACGAAGAGCCGAAAGAGCGCTTG ] [-] EMBL CD133579 [ CACCAATGAATGAACTGATGTCATCCTCATCGGTACATGTGTTAACAGACACAAGTTCATGTGTCTGGAGTGTATGAGAGCATGGTTGTGATACAGTGTTCGGCGTATATAACTGTTCAGCTTGTGTTGAGGCCTCCAAGGAAGAATTGCTTACAGGAACTGTGTGAACACTGCAGAAATTTCCTAAATTTGGTTTTAAAACCACTAACGTATCGCTCGAATTTATT ] [-] EMBL BG931806 [ tcTAACTGCTCAGTTTGTGTTGAGGCCTCCAAGGAAGAATTGCTTACAGGGACTGTGTGAACACTGTAGAAATTTCCTAAATTTGGTTTTAAAACCACTGACGTATCGCTCGAATTTATTGCAGACTCCGAGAGATTAACCTGGAAATTTGGATTCTGAAAAATTTGTGTTGAAATTGTACGAAGAGCCGAAAGAGCGCTTGTATATAAAAAATTCATATTCAGAC ] [+] EMBL CD095344 [ CAGAAATTTCCTAAATTTGGTTTTAAAACCACTGACGTATCGCTCGAATTTATTGCAGACTCCGAGAGATTAACCTGGAAATTTGGATTCTGAAAAATTTGTGTTGAAATTGTACGAAGAGCCGAAAGAGCGCTTGTATATAAAAAATTCATATTCAAACACCCCAAAGCATTGTTTACATTTTCTACATTCACATCACTTACGTTAGGTACAGGAACTGGTACAATAAGAAGTGGAAGAATTAATGGGCCACATGATCCACTAGGAGGGATAGGATTACGTGTAACACGCAAGCTTGGAATTGATGTATGCTTCGAAGGAGATCTGTTTGGAGTATTTTCGACTTTAGGAATGGAATTAAGAGATAAAGTGTTACTGTGTCCACTTCTTCGGTAATGCTGAAGTAAGTGCTTTTTACTTGAATAAGACCTGAAACAAACTGAACAAGAATATGTTGCTCCACATAGTTT TTGATGATAGGCATGATATGAGGGAGTAGGGAAGAAATGATTACATTTGTTACACTGGTAACTTTTCTGCATATGAACATGCTGGTAAT ] [+] EMBL CD095311 [ CAGAAATTTCCTAAATTTGGTTTTAAAACCACTGACGTATCGCTCGAATTTATTGCAGACTCCGAGAGATTAACCTGGAAATTTGGATTCTGAAAAATTTGTGTTGAAATTGTACGAAGAGCCGAAAGAGCGCTTGTATATAAAAAATTCATATTCAAACACCCCAAAGCATTGTTTACATTTTCTACATTCACATCACTTACGTTAGGTACAGGAACTGGTACAATAAGAAGTGGAAGAATTAATGGGCCACATGATCCACTAGGAGGGATAGGATTACGTGTAACACGCAAGCTTGGAATTGATGTATGCTTCGAAGGAGATCTGTTTGGAGTATTTTCGACTTTAGGAATGGAATTAAGAGATAAAGTGTTACTGTGTCCACTTCTTCGGTAATGCTGAAGTAAGTGCTTTTTACTTGAATAAGACCTGAAACAAACTGAACAAGAATATGTTGCTCCACATAGTTT TTGATGATAGGCATGATATGAGGGAGTAGGGAAGAAATGA ] [-] EMBL CD114098 [ TACGTTAGGTACAGGAGTGGGTACAATAAGAAGTGGAAGAATTAATGGGCCACATGATCCACTAGGAGGGATAGGATTACGTGTAACACGCAAGCTTGGAATTGATGTATGCTTCGAAGGAGATCTGTTTGGAGTATTTTCGACTGTAGGAATGGAATTAAGAGATAAAGTGTTACTGTGTCCACTTCTTCGGTAATGCTGAAGTAAGTGCTTTTTACTTGAATAAGACCTGAAACAAACTGCCCAACAATATGTTGCTCCACATAGTTTAATAGATGATAGGCATGATATGAGGGAGTAGGGAAGAAATGATTACATTTGTTACACTGGTAACTTTTCTGCATATGAACATGCTGGTAATGCTGCTTTAATCTCCAGTAAG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||