These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8944#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 794 fasta sequence [AAACTTCATGTTAAGTCACTGCTTTAAATTCTAAAGGATTTGATTAATTTTAACAGCAAAAGCATTTATCAAACTATTTAGGAAATTGTCTGTGATGGTACGCGATAATGTGAATCAATTAATAACAAAGAAACTTGTTTAGTAATAAATATACAACAATTTGCCTCATGGTCTGTTGATAATTTACTCGTCCTTGTATGTTTGTTCGGACTGGCATTTGGTTACTTCTAAAGTAATTTCCTTGTAAATAAGCAGTAAACCTAGGAGGATAGTACATGACATATAGGTTATGATGGGTCCATAAATCCAAAAAACTGTACTAACAAGCACCGCACCCATGATACGAGCCAATGCATTCAATGAACGGAATATACCCAACGTTTGTCCTTGTTGTTCTGCAGTAGTGTACAAAGAAACCAAACCGTTTACGCTCGGAAAAAAGATGGAGGATGCAAATGCATATAAAGCTAGTCCGATGTAGAAAACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAAGATAAATTAACTTTTCGTGTACAATGCCTTCTTGAACTAGCATCATTATTATCCCAATAAAGCCGAACATTTTGCCTTGATCAGAGCTTGAGAAATTAAAGCGAATTCTAGCCAAAAACAGTACTGTATATTCTATTCCGCAGTATACGCACAAGTAGCCGCACCAAAAGTATGCCANA] [+] EMBL CD073868 [AAACTTCATGTTAAGTCACTGCTTTAAATTCTAAAGGATTTGATTAATTTTAACAGCAAAAGCATTTATCAAACTATTTAGGAAATTGTCTGTGATGGTACGCGATAATGTGAATCAATTAATAACAAAGAAACTTGTTTAGTAATAAATATACAACAATTTGCCTCATGGTCTGTTGATAATTTACTCGTCCTTGTATGTTTGTTCGGACTGGCATTTGGTTACTTCTAAAGTAATTTCCTTGTAAATAAGCAGTAAACCTAGGAGGATAGTACATGACATATAGGTTATGATGGGTCCATAAATCCAAAAAACTGTACTAACAAGCACCGCACCCATGATACGAGCCAATGCATTCAATGAACGGAATATACCCAACGTTTGTCCTTGTTGTTCTGCAGTAGTGTACAAAGAAACCAAACCGTTTACGCTCGGAAAAAAGATGGAGGATGCAAATGCATATAAAGCTAGTCCGATGTAGAAAACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAA ] [+] EMBL CD076690 [ CTTTAAATTCTAAAGGATTTGATTAATTTTAACAGCAAAAGCATTTATCAAACTATTTAGGAAATTGTCTGTGATGGTACGCGATAATGTGAATCAATTAATAACAAAGAAACTTGTTTAGTAATAAATATACAACAATTTGCCTCATGGTCTGTTGATAATTTACTCGTCCTTGTATGTTTGTTCGGACTGGCATTTGGTTACTTCTAAAGTAATTTCCTTGTAAATAAGCAGTAAACCTAGGAGGATAGTACATGACATATAGGTTATGATGGGTCCATAAATCCAAAAAACTGTACTAACAAGCACCGCACCCATGATACGAGCCAATGCATTCAATGAACGGAATATACCCAACGTTTGTCCTTGTTGTTCTGCAGTAGTGTACAAAGAAACCAAACCGTTTACGCTCGGAAAAAAGATGGAGGATGCAAATGCATATAAAGCTAGTCCGATGTAGAAAACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTC ] [+] EMBL AI067029 [ TGGTCTGTTGATAATTTACTCGTCCTTGTATGTTTGTTCGGACTGGCATTTGGTTACTTCTAAAGTAATTTCCTTGTAAATAAGCAGTAAACCTAAGAGGATAGTACATGACA ATAc ] [-] EMBL CD197863 [ AACTGTACTAACAAGCACCGCACCCATGATACGAGCCAATGCATTCAATGAACGGAATATACCCAACGTTTGTCCTTGTTGTTCTGCAGTAGTGTACAAAGAAACCAAACCGTTTACGCTCGGAAAAAAGATGGAGGATGCAAATGCATATAAAGCTAGTCCGATGTAGAAAACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAAGATAAATTAACTTTTCGTGTACAAT ] [-] EMBL CD077356 [ CTGCAGTAGTGTACAAAGAAACCAAACCGTTTACGCTCGGAAAAAAGATGGAGGATGCAAATGCATATAAAGATAGTCCGATGTAGAAAACGAAAATATCTGTGGCAAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCAAAGTAT ] [+] EMBL CD179848 [ AACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAAGAAAAATTAACTTTTCGTGTACAATGCCTTCTTGAACTAGCATCATTATTATCCCAATAAAGCCGAACATTTTGCCTTGATCAGAGCTTGAGAAATTATAGCGAATTCTAGCCAAAAACAGTA ] [+] EMBL CD179929 [ AACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAAGATAAATTAACTTTTCGTGTACAATGCCTTCTTGAACTAGCATCATTATTATCCCAATAAAGCCGAACATTTTGCCTTGATCAGAGCTTGAGAAATTAAAGCGAATTCTAGCCAAAAACAGTACTGTATATTCTATTCCGCAGTATACGCACAAGTAGCCGCACCAAAAGTATGCCANA] [+] EMBL CD179923 [ AACGAAAATATTTGTGGCGAAACTGAAAATGGCAGACGCCAAAATCAAACAGCAAGAACTCCATGTTATGGCTTTGTCTTCTCTACCAAGTTTGAAGCTATGTATAAAGCAGCCTAGTTTTGGAGAAAACAAGATAAATTAACTTTTCGTGTACAATGCCTTCTTGAACTAGCATCATTATTATCCCAATAAAGCCGAACATTTTGCCTTGATCAGAGCTTGAGAAATTAAAGCGAATTCTAGCCAAAAACAGTACTGTATATTCTATTCCGCAGTATACGCACAAGTAGCCGCACCAGAAGTATGCC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||