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Schistosoma mansoni
cluster # 8949 cluster # 8949       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8949#0 length = 1004 sequences # 4  
consensus_8949#1 length = 696 sequences # 3  
consensus_8949#2 length = 676 sequences # 1  

consensusID : consensus_8949#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1004
fasta sequence
                              [CCCTCGAGCCAANAATTCGGCACGAGGAATTTGATGACATAAGAGAAATGTTACGTCACATGTACACACCTGGTGGTTGTGATATGACAGTCGAAACAGCGGAAAAGTTGCTGCCCATTTTACATCGATACCAAATCGATTCTATGGTTAGCTTTGGCTTAGAGGACACTTACATTTCGTCTCAATGATGTGACGGCACCATTGTTTCTTCGAATAGCTGACTTATATGGTTTGAGTAGATTACGACAAGCCGCTTTGGATTCTTGTGCTCGTTTAGATTATGGTCGAATGGTTAAAGCGTTTGAAGAAATAAATCTATCAATAGAACTTAAAAATGAAGTACTTGAGAGAAGAATAAAAGTTTTAGAAAAATGTCTTGTAGATATTCAACAGAGTTTTACTCATTCGTGTTCACGTATGGAAAGTCGTGCTGAACGTGTTCCATCCAATCATTGTTCATTACATTG-TCGTCCGTTTTCAACAATCACTTTTAGTCCTGTTGTAAACAGTGCAACAGGACCACCAATCAATAATAGTGCAGATCAAAATTTACAGAATAATAATGTCAATGATACTGTGCATAATGACGTAGCTGCAAGCATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGGGATAATGGTAATAATGATACTACACAAAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACTGCAGTGATACCATCAATTCCTAATACT-CCATTAATTACAGCTGTTTGTGAACAATGTGTAGAAC-ATTNCA-AACTCATATACAGGAA-TTGTGTNAAAGAGGATTGCAT-AN-ATACCGA-TATCACTTGCAGAAATCCTGATTCATGATTCCNTNATTGGTTTACAAAATCTTTTTTCTANAGACTTAAAGTCGACATTTCCTCAAGATCTCGTCGGTGGAACAGTTAGTACCTATGACTACTACATTTTTCTGACGAAAGACTTGTTTTAGATATTCTTCTTTCGGATGAACA]

[+] EMBL CD081976             [CCCTCGAGCCAANAATTCGGCACGAGGAATTTGATGACATAAGAGAAATGTTACGTCACATGTACACACCTGGTGGTTGTGATATGACAGTCGAAACAGCGGAAAAGTTGCTGCCCATTTTACATCGATACCAAATCGATTCTATGGTTAGCTTTGGCTTAGAGGACACTTACATTTCGTCTCAATGATGTGACGGCACCATTGTTTCTTCGAATAGCTGACTTATATGGTTTGAGTAGATTACGACAAGCCGCTTTGGATTCTTGTGCTCGTTTAGATTATGGTCGAATGGTTAAAGCGTTTGAAGAAATAAATCTATCAATAGAACTTAAAAATGAAGTACTTGAGAGAAGAATAAAAGTTTTAGAAAAATGTCTTGTAGATATTCAACAGAGTTTTACTCATTCGTGTTCACGTATGGAAAGTCGTGCTGAACGTGTTCCATCCAATCATTGTTCATTACATTGNTCGTCCGTTTTCAACAATCACTTTTAGTCCTGTTGTAAACAGTGCAACAGGACCACCAATCAATAATAGTGCAGATCAAAATTTACAGAATAATAATGTCAATGATACTGTGCATAATGACGTAGCTGCAAGCATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGGGATAATGGNTATAATGATACTACACANAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACTGCAGTGATACCATCAATTCCTAATACTNNCATT ATTACAGCTGTTTGTGAACCATGTGTANAAC ATTNCA AACTCATATACGGNAATTTGTGT ANAGAGGATTGCAT AN ATACCGA TATCACTTGCAGAAATCCTGATTCATGATTCCNTNATTGGTTTACAAAATCTTTTTTCTANAGACTTAAAGTCGACATTTCCTCAAGATCTCGTCGGTGGAACAGTTAGTACCTATGACTACTACATTTTTCTGACGAAAGACTTGTTTTAGATATTCTTCTTTCGGATGAACA]
[-] EMBL CD068562             [                       GATGAATTTGATGACATAAGAGAAATGTTACGTCACATGTACACACCTGGTGGTTGTGATATGACAGTCGAAACAGCGGAAAAGTTGCTGCCCATTTTACATCGATACCAAATCGATTCTATGGTTAGC TTGGCTGAGAGGACACTTACATTTCGTCTCAATGATGTGACGGCACCATTGTTTCTTCGAATAGCTGACTTATATGGTTTGAGTAGATTACGACAAGCCGCTTTGGATTCTTGTGCTCGTTTAGATTATGGTCGAATGGTTAAAGCGTTTGAAGAAATAAATCTATCAATAGAACTTAAAAATGAAGTACTTGAGAGAAGAATAAAAGTTTTAGAAAAATGTCTTGTAGATATTCAACAGAGTTTTACTCATTTGTGTTCACGTATGGAAAGTCGTGCTGAACGTGTTCCATCC ATCATTGTTCATTACATTG TCGTTCGTTTTCAACAATCACTTTTAGTCCTGTTGTAAACAGTGCGACA GA CACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD078306             [                                                                                                                                                                                                                                    GGTTTGAGTAGATTACGACAAGCCGCTTTGGATTCTTGTGCTCGTTTAGATTATGGTCGAATGGTTAAAGCGTTTGAAGAAATAAATCTATCAATAGAACTTAAAAATGAAGTACTTGAGAGAAGAATAAAAGTTTTAGAAAAATGTCTTGTAGATATTCAACAGAGTTTTACTCATTCGTGTTCACGTATGGAAAGTCGTGCTGAACGTGTTCCATCCAATCATTGTTCATTACATTG TCGTCCGTTTTCAACAATCACTTTTAGTCCTGTTGTAAACAGTGCAACAGGACCACCAATCAATAATAGTGCAGATCAAAATTTACAGAATAATAATGTCAATGATACTGTGCATAATGACGTAGCTGCAAGCATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGGGATAATGGTAATAATGATACTACACAAAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACTGCAGTGATACCATCAATTCCTAATACT CCATTAATTACAGCTGTTTGTGAACAATGTGTAGAACAATTCAA AACTCATATACAGGAA TTGTGTNAAAGAGGATTGCAT ANAATACCGATTATCACTTGCAGAAATCC                                                                                                                                                            ]
[+] EMBL CD078394             [                                                                                                                                                                                                                                    GGTTTGAGTAGATTACGACAAGCCGCTTTGGATTCTTGTGCTCGTTTAGATTATGGTCGAATGGTTAAAGCGTTTGAAGAAATAAATCTATCAATAGAACTTAAAAATGAAGTACTTGAGAGAAGAATAAAAGTTTTAGAAAAATGTCTTGTAGATATTCAACAGAGTTTTACTCATTCGTGTTCACGTATGGAAAGTCGTGCTGAACGTGTTCCATCCAATCATTGTTCATTACATTG TCGTCCGTTTTCAACAATCACTTTTAGTCCTGTTGTAAACAGTGCAACAGGACCACCAATCAATAATAGTGCAGATCAAAATTTACAGAATAATAATGTCAATGATACTGTGCATAATGACGTAGCTGCAAGCATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGGGATAATGGTAATAATGATACTACACAAAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACTGCAGTGATACCATCAATTCCTAATACT CCATTAATTACAGCTGTTTGTGAACAATGTGTAGAAC AATTCANAACTCATATACAGGAA TTGTGTAAAAGAGGATTGCATAAA ATACCGA Ttat                                                                                                                                                                          ]


>consensus_8949#0 CCCTCGAGCCAANAATTCGGCACGAGGAATTTGATGACATAAGAGAAATGTTACGTCACA TGTACACACCTGGTGGTTGTGATATGACAGTCGAAACAGCGGAAAAGTTGCTGCCCATTT TACATCGATACCAAATCGATTCTATGGTTAGCTTTGGCTTAGAGGACACTTACATTTCGT CTCAATGATGTGACGGCACCATTGTTTCTTCGAATAGCTGACTTATATGGTTTGAGTAGA TTACGACAAGCCGCTTTGGATTCTTGTGCTCGTTTAGATTATGGTCGAATGGTTAAAGCG TTTGAAGAAATAAATCTATCAATAGAACTTAAAAATGAAGTACTTGAGAGAAGAATAAAA GTTTTAGAAAAATGTCTTGTAGATATTCAACAGAGTTTTACTCATTCGTGTTCACGTATG GAAAGTCGTGCTGAACGTGTTCCATCCAATCATTGTTCATTACATTGTCGTCCGTTTTCA ACAATCACTTTTAGTCCTGTTGTAAACAGTGCAACAGGACCACCAATCAATAATAGTGCA GATCAAAATTTACAGAATAATAATGTCAATGATACTGTGCATAATGACGTAGCTGCAAGC ATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGGGATAATGGTAAT AATGATACTACACAAAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACTGCAGTG ATACCATCAATTCCTAATACTCCATTAATTACAGCTGTTTGTGAACAATGTGTAGAACAT TNCAAACTCATATACAGGAATTGTGTNAAAGAGGATTGCATANATACCGATATCACTTGC AGAAATCCTGATTCATGATTCCNTNATTGGTTTACAAAATCTTTTTTCTANAGACTTAAA GTCGACATTTCCTCAAGATCTCGTCGGTGGAACAGTTAGTACCTATGACTACTACATTTT TCTGACGAAAGACTTGTTTTAGATATTCTTCTTTCGGATGAACA



consensusID : consensus_8949#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 696
fasta sequence
                              [TCCTGTTGTAAACAGTGCAACAGGACCCCCAATCAATAATAGTGCAGATCAAAATTTACAGAATAATAATGTCAATGATACTGTGCATAATGACGTAGCTGCAAGCATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGGGATAATGGTAATAATGATACTACACAAAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACTGCAGTGATACCATCAATTCCTAATACTCCATTAATTACAGCTGTTTGTGAACAATGTGTAGAACAATTCAAAACTCATATACAGGAATTGTGTAAAAGAGGATTGCATAAAATACCGATTATCACTTGCAGAAATCCTTGATTTCATGTATTCCCTTATTGTTTTTACAAAATTCTTTTTTTCTTAGAGACTATAGAGTCAGAACATTTTCACTCCAAGATACTCAGTCGAGTGAAACAAGTTTAGTAACACATCATGACATACGTAACATATCTATTCATAGACTGAAAAAGAACATCTGTTTATTTCAAGAATTATTTCATTTCATTTCGGTTATATGAAACAATATAATATTATCTTAATAAACACTTTGTTAAACTCAGTTGTATGAGAACAAAATGGTAGTTTGGGTGAAGTTTCATTTACTTTGGTAGCTTATATTTCTCAATGTCCTAAGCGCTACTTAACAATGCATC]

[-] EMBL CD072956             [TCCTGTTGTAAACAGTGCAACAGGACCCCCAATCAATAATAGTGCAGATCAAAATTTACAGAATAATAATGTCAATGATACTGTGCATAATGACGTAGCTGCAAGCATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGGGATAATGGTAATAATGATACTACACAAAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACTGCAGTGATACCATCAATTCCTAATACTCCATTAATTACAGCTGTTTGTGAACAATGTGTAGAACAATTCAAAACTCATATACAGGAATTGTGTAAAAGAGGATTGCATAAAATACCGATTATCACTTGCAGAAATCCTTGATTTCATGTATTCCCTTATTGTTTTTACAAAATTCTTTTTTTCTTAGAGACTATAGAGTCAGAACATTTTCACTCCAAGATACTCAGTCGAGTGAAACAAGTTTAGTAACACATCATGACATACGTAACATATCTATTCATAGACTGAAAAAGAACATCTGTTTATTTCAATAATTATTTCATTTCATTTCGGTTATATGAAACAATATAATAT                                                                                                                          ]
[+] EMBL CD082476             [                                                                                             CGTAGCTGCAAGCATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGGGATAATGGTAATAATGATACTACACAAAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACTGCAGTGATACCATCAATTCCTAATACTCCATTAATTACAGCTGTTTGTGAACAATGTGTAGAACAATTCAAAACTCATATACAGGAATTGTGTAAAAGAGGATTGCATAAAATACCGATTATCACTTGCAGAAATCCTTGATTTCATGTATTCCCTTATTGTTTTTACAAAATTCTTTTTTTCTTAGAGACTATAGAGTCAGAACATTTTCACTCCAAGATACTCAGTCGAGTGAAACAAGTTTAGTAACACATCATGACATACGTAACATATCTATTCATAGACTGAAAAAGAACATCTGTTTATTTCAAGAATTATTTCATTTCATTTCGGTTATATGAAACAATATAATATTATCTTAATAAACACTTTGTTAAACTCAGTTGTATGAGAACAAAATGGTAGTTTGGGTGAAGTTTCATTTACTTTGGTAGCTTATATTTCTCAATGTCCTAAGCGCTACTTAACAATGCAT ]
[-] EMBL CD076074             [                                                                                              GTAGCTGCAAGCATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGGGATAATGGTAATAATGATACTACACAAAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACTGCAGTGATACCATCAATTCCTAATACTCCATTAATTACAGCTGTTTGTGAACAATGTGTAGAACAATTCAAAACTCATATACAGGAATTGTGTAAAAGAGGATTGCATAAAATACCGATTATCACTTGCAGAAATCCTTGATTTCATGTATTCCCTTATTGTTTTTACAAAATTCTTTTTTTCTTAGAGACTATAGAGTCAGAACATTTTCACTCCAAGATACTCAGTCGAGTGAAACAAGTTTAGTAACACATCATGACATACGTAACATATCTATTCATAGACTGAAAAAGAACATCTGTTTATTTCAAGAATTATTTCATTTCATTTCGGTTATATGAAACAATATAATATTATCTTAATAAACACTTTGTTAAACTCAGTTGTATGAGAACAAAATGGTAGTTTGGGTGAAGTTTCATTTACTTTGGTAGCTTATATTTCTCAATGTCCTAAGCGCTACTTAACAATGCATC]


>consensus_8949#1 TCCTGTTGTAAACAGTGCAACAGGACCCCCAATCAATAATAGTGCAGATCAAAATTTACA GAATAATAATGTCAATGATACTGTGCATAATGACGTAGCTGCAAGCATAATGCCATTTTC AGTTGCTAGAAATGTGGAAATACGTACAAGTGGGGATAATGGTAATAATGATACTACACA AAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACTGCAGTGATACCATCAATTCC TAATACTCCATTAATTACAGCTGTTTGTGAACAATGTGTAGAACAATTCAAAACTCATAT ACAGGAATTGTGTAAAAGAGGATTGCATAAAATACCGATTATCACTTGCAGAAATCCTTG ATTTCATGTATTCCCTTATTGTTTTTACAAAATTCTTTTTTTCTTAGAGACTATAGAGTC AGAACATTTTCACTCCAAGATACTCAGTCGAGTGAAACAAGTTTAGTAACACATCATGAC ATACGTAACATATCTATTCATAGACTGAAAAAGAACATCTGTTTATTTCAAGAATTATTT CATTTCATTTCGGTTATATGAAACAATATAATATTATCTTAATAAACACTTTGTTAAACT CAGTTGTATGAGAACAAAATGGTAGTTTGGGTGAAGTTTCATTTACTTTGGTAGCTTATA TTTCTCAATGTCCTAAGCGCTACTTAACAATGCATC



consensusID : consensus_8949#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 676
fasta sequence
                              [TAAGTTGCACGGCTCCAAATGTGAGCGAAATCGCCATACAAGCCGATTGTGACGTTGATGATACTGAACCGCAGAAAGATGAACATGACGTGTTAGACTTTAGCAGTCCATTTCTATTCAGTGATGCTGTTCTGATTGTTCAGGGTAGAAATCTTCATTGTCATCGTGCTATTCTATCCATATATTCACCAGTATTCAAAGCTATGTTTCAAAATCGATGCATTGAAAATCAAAAAAATGAAGTTGTTATACCAGTTGATGAATTTGATGACATAAGAGAAATGTTACGTCACATGTACACACCTGGTGGTTGTGATATGACAGGTATGTTATTTCATTTTAGTTTGACTGCTCATTTTATTAATTACATTTACATAATCTGTCTAACAAATACGTGGACTTAATTTTTCTAGCATTCGCGGTATTCCCCATTAGGTTTTTCTCACTAGGGGGCANACGGTGGTGCTGAATTCTACGTGGAGTTTCTTAGAATGTCTATGGATCGCGTACAAATAGATTCTTGTGTTGCTGGTGAATTACTGTTGCATAAAAACAATACACCTTAGTATTTACCCATGATTGTCTATAAATGTGGCTTGTAGCGGCTGCCTGTNACACATATGTGTATTTATTGCAACTTCTAGACAGACGCATCATTGGTTATTCTGTAACTCCC]

[+] EMBL CD148289             [TAAGTTGCACGGCTCCAAATGTGAGCGAAATCGCCATACAAGCCGATTGTGACGTTGATGATACTGAACCGCAGAAAGATGAACATGACGTGTTAGACTTTAGCAGTCCATTTCTATTCAGTGATGCTGTTCTGATTGTTCAGGGTAGAAATCTTCATTGTCATCGTGCTATTCTATCCATATATTCACCAGTATTCAAAGCTATGTTTCAAAATCGATGCATTGAAAATCAAAAAAATGAAGTTGTTATACCAGTTGATGAATTTGATGACATAAGAGAAATGTTACGTCACATGTACACACCTGGTGGTTGTGATATGACAGGTATGTTATTTCATTTTAGTTTGACTGCTCATTTTATTAATTACATTTACATAATCTGTCTAACAAATACGTGGACTTAATTTTTCTAGCATTCGCGGTATTCCCCATTAGGTTTTTCTCACTAGGGGGCANACGGTGGTGCTGAATTCTACGTGGAGTTTCTTAGAATGTCTATGGATCGCGTACAAATAGATTCTTGTGTTGCTGGTGAATTACTGTTGCATAAAAACAATACACCTTAGTATTTACCCATGATTGTCTATAAATGTGGCTTGTAGCGGCTGCCTGTNACACATATGTGTATTTATTGCAACTTCTAGACAGACGCATCATTGGTTATTCTGTAACTCCC]


>consensus_8949#2 TAAGTTGCACGGCTCCAAATGTGAGCGAAATCGCCATACAAGCCGATTGTGACGTTGATG ATACTGAACCGCAGAAAGATGAACATGACGTGTTAGACTTTAGCAGTCCATTTCTATTCA GTGATGCTGTTCTGATTGTTCAGGGTAGAAATCTTCATTGTCATCGTGCTATTCTATCCA TATATTCACCAGTATTCAAAGCTATGTTTCAAAATCGATGCATTGAAAATCAAAAAAATG AAGTTGTTATACCAGTTGATGAATTTGATGACATAAGAGAAATGTTACGTCACATGTACA CACCTGGTGGTTGTGATATGACAGGTATGTTATTTCATTTTAGTTTGACTGCTCATTTTA TTAATTACATTTACATAATCTGTCTAACAAATACGTGGACTTAATTTTTCTAGCATTCGC GGTATTCCCCATTAGGTTTTTCTCACTAGGGGGCANACGGTGGTGCTGAATTCTACGTGG AGTTTCTTAGAATGTCTATGGATCGCGTACAAATAGATTCTTGTGTTGCTGGTGAATTAC TGTTGCATAAAAACAATACACCTTAGTATTTACCCATGATTGTCTATAAATGTGGCTTGT AGCGGCTGCCTGTNACACATATGTGTATTTATTGCAACTTCTAGACAGACGCATCATTGG TTATTCTGTAACTCCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8949#0      CCCTCGAGCCAANAATTCGGCACGAGGAATTTGATGACATAAGAGAAATGTTACGTCACA 60
consensus_8949#1      ------------------------------------------------------------
consensus_8949#2      ------------------------------------------------------------
                                                                                  

consensus_8949#0      TGTACACACCTGGTGGTTGTGATATGACAGTCGAAACAGCGGAAAAGTTGCTGCCCATTT 120
consensus_8949#1      ------------------------------------------------------------
consensus_8949#2      ------------------------------------------------------------
                                                                                  

consensus_8949#0      TACATCGATACCAAATCGATTCTATGGTTAGCTTTGGCTTAGAGGACACTTACATTTCGT 180
consensus_8949#1      ------------------------------------------------------------
consensus_8949#2      ------------------------------------------------------------
                                                                                  

consensus_8949#0      CTCAATGATGTGACGGCACCATTGTTTCTTCGAATAGCTGACTTATATGGTTTGAGTAGA 240
consensus_8949#1      ------------------------------------------------------------
consensus_8949#2      ------------------------------------------------------------
                                                                                  

consensus_8949#0      TTACGACAAGCCGCTTTGGATTCTTGTGCTCGTTTAGATTATGGTCGAATGGTTAAAGCG 300
consensus_8949#1      ------------------------------------------------------------
consensus_8949#2      ----------------------------------------TAAGTTGCACGGCTCCAAAT 20
                                                                                  

consensus_8949#0      TTTGAAGAAATAAATCTATCAATAGAACTTAAAAATGAAGTACTTGAGAGAAGAATAAAA 360
consensus_8949#1      ------------------------------------------------------------
consensus_8949#2      GTGAGCGAAATCGCCATACAAGCCGATTGTGACGTTGATGATACTGAACCGCAGAAAGAT 80
                                                                                  

consensus_8949#0      GTTTTAGAAAAATGTCTTGTAGATATTCAACAGAGTTTTACTCATTCGTGTTCACGTATG 420
consensus_8949#1      ------------------------------------------------------------
consensus_8949#2      G-------AACATGACGTGTTAGACTTTAGCAGTCCATTTCTATTCAGTGATGCTGTTCT 133
                                                                                  

consensus_8949#0      GAAAGTCGTGCTGAACGTGTTCCATCCAATCATTGTTCATTACATTGTCGTCCGTTTTCA 480
consensus_8949#1      ------------------------------------------------------------
consensus_8949#2      GATTGTTCAGGGTAGAAATCTTCATT--GTCATCGT--GCTATTCTATC-CATATATTCA 188
                                                                                  

consensus_8949#0      ACAATCACTTTTAGTCCTGTTGTAAA--CAGTGCAACAGGACCACCAATCAATAATAGTG 538
consensus_8949#1      --------------TCCTGTTGTAAA--CAGTGCAACAGGACCCCCAATCAATAATAGTG 44
consensus_8949#2      CCAGT-ATTCAAAGCTATGTTTCAAAATCGATGCATTGAAA------ATCAA-AAAAATG 240
                                       ****  ***  *  ****     *      ***** ** * **

consensus_8949#0      CAGATCAAAATTTACAGAATAATAATGTCAATGATACTGTGCATA-ATGACGTAGC-TGC 596
consensus_8949#1      CAGATCAAAATTTACAGAATAATAATGTCAATGATACTGTGCATA-ATGACGTAGC-TGC 102
consensus_8949#2      AAGTT---GTTATACCAGTTGATGAATTTGATGACATAAGAGAAATGTTACGTCACATGT 297
                       ** *     * ***    * ** *  *  **** *      * *  * ****  * ** 

consensus_8949#0      AAGCATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGG-GATAATG 655
consensus_8949#1      AAGCATAATGCCATTTTCAGTTGCTAGAAATGTGGAAATACGTACAAGTGGG-GATAATG 161
consensus_8949#2      ACACACCTGGTGGTTGTGATATGACAGGTATGTTATTTCATTTTAGTTTGACTGCTCATT 357
                      *  **    *   ** * *  **  **  ****      *  *     **   * * ** 

consensus_8949#0      GTAATAATGATACT-ACACAAAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACT 714
consensus_8949#1      GTAATAATGATACT-ACACAAAGAGAAGCAGATACAAATTTATCCAATACAGCTACTACT 220
consensus_8949#2      TTATTAATTACATTTACATAATCTGTCTAACAAATACGTGGACTTAATTTTTCTAGCATT 417
                       ** **** * * * *** **   *    * * * *  *  *   ***    ***  * *

consensus_8949#0      -GCAGTGATACC-ATCAATTCCTAATACTCCATTAATTACA-GCTGTTTGTGAACAATGT 771
consensus_8949#1      -GCAGTGATACC-ATCAATTCCTAATACTCCATTAATTACA-GCTGTTTGTGAACAATGT 277
consensus_8949#2      CGCGGTATTCCCCATTAGGTTTTTCT-CACTAGGGGGCANACGGTGGTGCTGAATTCTAC 476
                       ** **  * ** ** *  *  *  * * * *      * * * ** *  ****   *  

consensus_8949#0      GTAGAACATTNCAAA-CTCATATACAGGAATTGTGTNAAAGAGGATTGCATANA-TACCG 829
consensus_8949#1      GTAGAACAATTCAAAACTCATATACAGGAATTGTGTAAAAGAGGATTGCATAAAATACCG 337
consensus_8949#2      GTGGAGTTTCTTAGA----ATGTCTATGGATCGCGTACAAATAGATT-CTTGTGTTGCTG 531
                      ** **       * *    ** *  * * ** * **  **   **** * *    * * *

consensus_8949#0      AT--ATCACT--TGCA-GAAATCCTGA--TTCATG-ATTCCNTNATTGGTTT-ACAAAAT 880
consensus_8949#1      ATT-ATCACT--TGCA-GAAATCCTTGATTTCATGTATTCCCTTATTGTTTTTACAAAAT 393
consensus_8949#2      GTGAATTACTGTTGCATAAAAACAATACACCTTAGTATTTACCCATGATTGTCTATAAAT 591
                       *  ** ***  ****  *** *           * ***     **   * *    ****

consensus_8949#0      CTTTTTTCT---ANAGACT-TAAAGTCG--ACATTTCC---TCAAGAT-CTC-GTCG-GT 928
consensus_8949#1      TCTTTTTTTCTTAGAGACTATAGAGTCAGAACATTTTCACTCCAAGATACTCAGTCGAGT 453
consensus_8949#2      GTGGCTTGTAGCGGCTGCCTGTNACACAT-ATGTGTATTTATTGCAACTTCTAGACAGAC 650
                           ** *        *     *  *   *  * *          *      * *    

consensus_8949#0      GGAACAG--TTAGTACC----TATGAC-TACTACATTTTTCTGACGAAAGACTTGTTTTA 981
consensus_8949#1      GAAACAAGTTTAGTAACACATCATGACATACGTAACATATCTATTCATAGACTGAAAAAG 513
consensus_8949#2      GCATCA---TTGGTTATTC--TGTAACTCCC----------------------------- 676
                      * * **   ** **         * **   *                             

consensus_8949#0      GATATTCTTCTTTCGGATGAACA------------------------------------- 1004
consensus_8949#1      AACATCTGTTTATTTCAAGAATTATTTCATTTCATTTCGGTTATATGAAACAATATAATA 573
consensus_8949#2      ------------------------------------------------------------
                                                                                  

consensus_8949#0      ------------------------------------------------------------
consensus_8949#1      TTATCTTAATAAACACTTTGTTAAACTCAGTTGTATGAGAACAAAATGGTAGTTTGGGTG 633
consensus_8949#2      ------------------------------------------------------------
                                                                                  

consensus_8949#0      ------------------------------------------------------------
consensus_8949#1      AAGTTTCATTTACTTTGGTAGCTTATATTTCTCAATGTCCTAAGCGCTACTTAACAATGC 693
consensus_8949#2      ------------------------------------------------------------
                                                                                  

consensus_8949#0      ---
consensus_8949#1      ATC 696
consensus_8949#2      ---
                         




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)