cluster # 8982

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Schistosoma mansoni
cluster # 8982 cluster # 8982 Sequences # 8 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8982#0 length = 380 sequences # 8

consensusID : consensus_8982#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 380
fasta sequence

                              [TGTCTTTTC-AAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTGAAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTGTCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC-TTTTTTGTGTGAGATGAACATAGTCACTCCTGAGGAAGTCAAGCTGCATGGATTTTAATTGCATGTTGACATTTCAATTTTGTGGTCATTTCAAAGAGTCACTACTTCTTCAGAT]

[+] EMBL CD158015             [TGTCTTTTCAAAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTGAAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACT                                                                                                                                                                                                                                                                      ]
[+] EMBL CD202722             [   CTTTTC AAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTGAAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTGTCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTCTTTTTTTGTGTGAGATGAACAT                                                                                              ]
[+] EMBL CD145991             [   CTTTTC AAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTGAAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTGTCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAATGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC TTTTTTGTGTGAGATGAACAT                                                                                              ]
[-] EMBL CD149822             [     TTTC AAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTGAAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTGTCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC CTTTTTGTGTGAGATGAACAT                                                                                              ]
[+] EMBL AI067592             [                                                                 TAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTGTCCAAAGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC TTTTTTGTGTGAGATGAACATAGTCACTCCTGAGGAAGTCAAGCTGCATGGATTTTAATTGCATGTTGACATTTCAATTTTGTGGTCATTTCAAAGAGTCACTACTTCTTCAGAT]
[+] EMBL CD145917             [                                                                                                AATGGCCGCAAAACACTTACTACTGTCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC TTTTTTGTGTGAGATGAACAT                                                                                              ]
[+] EMBL CD146007             [                                                                                                                                                           AATCTTGAAGTACTGCAAGAAACATTTCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC TTTTTTGTGTGAGATGAACAT                                                                                              ]
[+] EMBL CD145965             [                                                                                                                                                                                                         GTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAGGTGATCAGAGGGATAATCTGAAGTC TTTTTTGTGTGAGATGAACAT                                                                                              ]




>consensus_8982#0
TGTCTTTTCAAAACCTCCAGACGTATGACCCTTTTGCAGAAGAAGGAGAATCCAATGTTG
AAGGTAGGATTGTTCATATTCGAATACAACAACGAAATGGCCGCAAAACACTTACTACTG
TCCAAGGGATACCAGAGAAGTTTGACAAGCGAAAAATCTTGAAGTACTGCAAGAAACATT
TCGCGTGTAACGGTACAGTAGTTGAACATGAAGAGTATGGGGAGGTGTTACAATTCCAAG
GTGATCAGAGGGATAATCTGAAGTCTTTTTTGTGTGAGATGAACATAGTCACTCCTGAGG
AAGTCAAGCTGCATGGATTTTAATTGCATGTTGACATTTCAATTTTGTGGTCATTTCAAA
GAGTCACTACTTCTTCAGAT

clustalw multiple alignements is not computed in this case