| These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_8992#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 671 fasta sequence 
                              [CAGAAACTGAAACTTCTTGCTGCATTCGTCGACGGGCAAAATACTTGCTAGCTTNTGAGACAACTTTTGTAAATCCATCTCCATGTGGAGTATCCTCTTCAAAGGTGTCTTGATTTACCTCGTAGAACTCTTTACGTGATTGCGAGAACTTATCAGAATCATCCTTGGAAACTGTTTCACTTTTTCGCTCTGTGCGATTAGCCCATGTAGACAATGAATCCACAGCATAAGAATTTTCAGGAAATGAGGCATGAGGCTTAATAGACATTAAAGGCGGTATTGAGGACATATCATTTCTTTTGTGGTAAAAAGTGGTTCCACATCGAGAGGCACGCGTGTTACTACGATAGGCACTATGTTGGTTTGTGGAACTTCCACCTGACAAGTGAGACTTTTCATTTTTCTGAACAGTTCCACTAATAACGGATGGGGAAGAAGAGACTTTAGAACATTCTGTTTGTAAAGCAATCCCACCAGCAGCAGGTCTTGAACTGGTACCAACCGCTTGCCGCCGACGCGTAAGAGACCGTGAGTTCATGTTATTTTCATCAAGCGGATCGTTAGCAGTATTTGAAACAACTTCACTATTGTTGCTTTGCTTTCCTTGATCAACAAAATCAACAGCAGAATCAGTATGACCACCATTACCACTACATTGATTGCCACCACGA]
[-] EMBL CD194577             [CAGAAACTGAAACTTCTTGCTGCATTCGTCGACGGGCAAAATACTTGCTAGCTTNTGAGACAACTTTTGTAAATCCATCTCCATGTGGAGTATCCTCTTCAAAGGTGTCTTGATTTACCTCGTAGAACTCTTTACGTGATTGCGAGAACTTATCAGAATCATCCTTGGAAACTGTTTCACTTTTTCGCTCTGTGCGATTAGCCCATGTAGACAATGAATCCACAGCATAAGAATTTTCAGGAAATGAGGCATGAGGCTTAATAGACATTAAAGGCGGTATTGAGGACATATCATTTCTTTTGTGGTAAAAAGTGGTTCCACATCGAGAGGCACGCGTGTTACTACGATAGGCACTATGTTGGTTTGTGGAACTTCCACCTGACAAGTGAGACTTTTCATTTTTCTGAACAGTTCCACTAATAACGGATGGGGAAGAAGAGACTTTAGAACATTCTGTTTGTA                                                                                                                                                                                                                 ]
[-] EMBL CD160363             [                                                                                                                                                                                                  CGATTAGCCCATGTAGACAATGAATCCACAGCATAAGAATTTTCAGGAAATGAGGCATGAGGCTTAATAGACATTAAAGGCGGTATTGAGGACATATCATTTCTTTTGTGGTAAAAAGTGGTTCCACATCGAGAGGCACGCGTGTTACTACGATAGGCACTATGTTGGTTTGTGGAACTTCCACCTGACAAGTGAGACTTTTCATTTTTCTGAACAGTTCCACTAATAACGGATGGGGAAGAAGAGACTTTAGAACATTCTGTTTGTAAAGCAATCCCACCAGCAGCAGGTCTTGAACTGGTACCAACCGCTTGCCGCCGACGCGTAAGAGACCGTGAGTTCATGTTATTTTCATCAAGCGGATCGTTAGCAGTATTTGAAACAACTTCACTATTGTTGCTTT                                                                          ]
[+] EMBL CD114520             [                                                                                                                                                                                                                                                                                                                            TCCACATCGAGAGGCACGCGTGTTACTACGATAGGCACTATGTTGGTTTGTGGAACTTCCACCTGACAAGTGAGACTTTTCATTTTTCTGAACAGTTCCACTATTATCGGATGGGGAAGAAGAGACTTTAGAACATTCTGTTTGTAAAGCAATCCCACCAGCAGCAGGTCTTGAACTGGTACCAACCGCTTGCCGCCGACGCGTAAGAGACCGTGAGTTCATGTTATTTTCATCAAGCGGATCGTTAGCAGTATTTGAAACAACTTCACTATTGTTGCTTTGCTTTCCTTGATCAACAAAATCAACAGCAGAATCAGTATGACCACCATTACCACTACATTGATTGCCACCACGA]
[+] EMBL CD114523             [                                                                                                                                                                                                                                                                                                                            TCCACATCGAGAGGCACGCGTGTTACTACGATAGGCACTATGTTGGTTTGTGGAACTTCCACCTGACAAGTGAGACTTTTCATTTTTCTGAACAGTTCCACTAATAACGGATGGGGAAGAAGAGACTTTAGAACATTCTGTTTGTAAAGCAATCCCACCAGCAGCAGGTCTTGAACTGGTACCAACCGCTTGCCGCCGACGCGTAAGAGACCGTGAGTTCATGTTATTTTCATCAAGCGGATCGTTAGCAGTATTTGAAACAACTTCACTATTGTTGCTTTGCTTTCCTTGATCAACAAAATCAACAGCAGAATCAGTATGACCACCATTACCACTACATTGATTGCCACCACGA]
consensusID : consensus_8992#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 546 fasta sequence 
                              [TTGGTCTTTTAATAATGACTTTGTCCTGATCCGTGAGGTTCTGCGGATTACGACGCACTCATGCATTGAGAATGAATGATGAAAGGACAAAACTAACGAAATACATCTGAAGGAGGCGCGGAACACTTATATATCTTACCGCAAATCAAGACTAAACAGACTATGTCTGTGTCTCCAAAACAACTATTACATGTATACTATGGCAGGATCAATTAGTAAGTCACTATCTTATCATTGCCGCCCGATTTGACGTTTGACTAACTGTCCGTGCGACCTCAGTGGTTGATTCGGGTGATGCTCGCCAAAGTTTCAATTCAGTGCCATACATAATCAATGCGTATGAGGTGTATATACGTACTGAAGATAAAAAGATACTGAGTAGTTGAACTTCAGCGTAACACAAGTTATTGCTTTAATCCAAAGCTTCGTAATCTTAAGAATATTTATTTAGAAGGAAAAAAAAATTATTTGTTTAAGTGGAACATAGAAGTNTTTTGTTTCTAATTGTAGACTTTGGATAAAATATGTTTAGATGGACAAGAAGAG]
[+] EMBL CD091365             [TTGGTCTTTTAATAATGACTTTGTCCTGATCCGTGAGGTTCTGCGGATTACGACGCACTCATGCATTGAGAATGAATGATGAAAGGACAAAACTAACGAAATACATCTGAAGGAGGCGCGGAACACTTATATATCTTACCGCAAATCAAGACTAAACAGACTATGTCTGTGTCTCCAAAACAACTATTACATGTATACTATGGCAGGATCAATTAGTAAGTCACTATCTTATCATTGCCGCCCGATTTGACGTTTGACTAACTGTCCGTGCGACCTCAGTGGTTGATTCGGGTGATGCTCGCCAAAGTTTCAATTCAGTGCCATACATAATCAATGCGTATGAGGTGTATATACGTACTGAAGATAAAAAGATACTGAGTAGTTGAACTTCAGCGTAACACAAGTTATTGCTTTAATCCAAAGCTTCGTAATCTTAAGAATATTTATTTAGAAGGAAAAAAAAATTATTTGTTTAAGTGGAACATAGAAGTNTTTTGTTTCTAATTGTAGACTTTGGATAAAATATGTTTAGATGGACAAGAAGAG]
consensusID : consensus_8992#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 417 fasta sequence 
                              [GACATCCATTTAATATATCGTACTGCTATGAAGATAACTAATGGTAAAAGTTATGAGACATGTCAGATTATATATGGTTAAGAGATGATAAGGACTAATAGCAAACCAGAGGATATGAAAGAGTAGATTGTAAAATTTTTAGGGTTAGAAAAATAAAACTTGAGCAACTCACAAGAATTTAGGACATTTGAGCTTCTTTTGATCTGCCTTAATTGATCATCATCCATAAGATTAGTGAGTTATCTGTCTATTTGGAATAAGAAAAATAAAAGGACAGAAATAATGTCGTTTTAACGATTAGAGGAATTCGAAATCTGAAAGTGATGGTAAGGAGCAGAAAGCCATGATTAATAATCGACTTCTTTTGTAGGCTGTATTATCCTTAGATTATTATCCTATCTCGTACATCGATCACAC]
[+] EMBL CD127133             [GACATCCATTTAATATATCGTACTGCTATGAAGATAACTAATGGTAAAAGTTATGAGACATGTCAGATTATATATGGTTAAGAGATGATAAGGACTAATAGCAAACCAGAGGATATGAAAGAGTAGATTGTAAAATTTTTAGGGTTAGAAAAATAAAACTTGAGCAACTCACAAGAATTTAGGACATTTGAGCTTCTTTTGATCTGCCTTAATTGATCATCATCCATAAGATTAGTGAGTTATCTGTCTATTTGGAATAAGAAAAATAAAAGGACAGAAATAATGTCGTTTTAACGATTAGAGGAATTCGAAATCTGAAAGTGATGGTAAGGAGCAGAAAGCCATGATTAATAATCGACTTCTTTTGTAGGCTGTATTATCCTTAGATTATTATCCTATCTCGTACATCGATCACAC]
consensusID : consensus_8992#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 326 fasta sequence 
                              [AGTTTGTTTAAATAGCCGCGATTATTGATCGTGCTAAGGTAGCATAATATATAGTCTTTTAATTGTAGACTTGTGAATGGTTTAATGAGGTGTGATTAAGGTGATAGTCTATCATCTGAATTTAGTTTAGTGGTTAGGAACCCACTGTTACATTATTAGACGGAAAGACCCCAAGAGCTTTTGTTGTGTTAGATTTGNTTGGNGTAAATGTAGATTATTCATTTATTTNTAGATCCTTCATGGATAAAAGGATAAAGNNACCTTGGCGGATAACTGAGTAAAGGACAGGGAGAGNGTCCTATTGATCTGTTTATTACTACCTCGAT]
[+] EMBL SM220                [AGTTTGTTTAAATAGCCGCGATTATTGATCGTGCTAAGGTAGCATAATATATAGTCTTTTAATTGTAGACTTGTGAATGGTTTAATGAGGTGTGATTAAGGTGATAGTCTATCATCTGAATTTAGTTTAGTGGTTAGGAACCCACTGTTACATTATTAGACGGAAAGACCCCAAGAGCTTTTGTTGTGTTAGATTTGNTTGGNGTAAATGTAGATTATTCATTTATTTNTAGATCCTTCATGGATAAAAGGATAAAGNNACCTTGGCGGATAACTGAGTAAAGGACAGGGAGAGNGTCCTATTGATCTGTTTATTACTACCTCGAT]
consensusID : consensus_8992#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 257 fasta sequence 
                              [TGTTTTGGGAGTTAAATGAACCATTATCACGCCTCAGGATGTAGGCCGAGATTCTTCGGAAGTTACGAGTGCGATGCTCCTTCTAACAACCAGAGCAACAATTTTTATAGGTACATGGAACGTCCGGACAATGTGAGAGACCGGGAAGATCAGTCAAATAGCAATGGAAATGAGGAGATACAAATCGGCGGTACTTGGGATTAGTGAAACCCATTGGACACAAGTTGGACAGCAGAAGCTAGATACGGGAGAGATGC]
[+] EMBL CD166252             [TGTTTTGGGAGTTAAATGAACCATTATCACGCCTCAGGATGTAGGCCGAGATTCTTCGGAAGTTACGAGTGCGATGCTCCTTCTAACAACCAGAGCAACAATTTTTATAGGTACATGGAACGTCCGGACAATGTGAGAGACCGGGAAGATCAGTCAAATAGCAATGGAAATGAGGAGATACAAATCGGCGGTACTTGGGATTAGTGAAACCCATTGGACACAAGTTGGACAGCAGAAGCTAGATACGGGAGAGATGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#4      ------------------------------------------------------------
consensus_8992#0      CAGAAACTGAAACTTCTTGCTGCATTCGTCGACGGGCAAAATACTTGCTAGCTTNTGAGA 60
consensus_8992#1      ------------------------------------------------------------
                                                                                  
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#4      ------------------------------------------------------------
consensus_8992#0      CAACTTTTGTAAATCCATCTCCATGTGGAGTATCCTCTTCAAAGGTGTCTTGATTTACCT 120
consensus_8992#1      TTGGTCTTTTAATAATGACTTTGTCCTGATCCGTGAGGTTCTGCGGATTACGACGCACTC 60
                                                                                  
consensus_8992#2      ----------------------------GACATCCATTTAATATATCGTACT-GCTATGA 31
consensus_8992#3      ---------------------------------------AGTTTGTTTAAATAGCCGCGA 21
consensus_8992#4      ------------------------------------------------------------
consensus_8992#0      CGTAGAACTCTTTACGTGATTGCGAGAACTTATCAGAATCATCCTTGGAAACTGTTTCAC 180
consensus_8992#1      ATGCATTGAGAATGAATGATGAAAGGACAAAACTAACGAAATACATCTGAAG-GAGGCGC 119
                                                                                  
consensus_8992#2      AGATAACTAATGGTAAAAGTTATGAGACA-TGTCAGATTATATATGGTTAAGAGATGATA 90
consensus_8992#3      TTATTGATCGTGCTAAG-GTAGCATAATA-TAT-AGTCTTTTAATTGT--AGACTTGTGA 76
consensus_8992#4      -----------------------------------------------------TGTTTTG 7
consensus_8992#0      TTTTTCGCTCTGTGCGATTAGCCCATGTA-GACAATGAATCCACAGCATAAGAATTTTCA 239
consensus_8992#1      GGAACACTTATATATCTTACCGCAAATCAAGACTAAACAGACTATGTCTGTGTCTCCAAA 179
                                                                                  
consensus_8992#2      AGGACTAA---TAGCAAACCA-GAGGATATGAAAGAGTAGATTGTAAA------ATT--T 138
consensus_8992#3      ATGGTTTA---ATGAGGTGTG-ATTAAGGTGATAGTCTATCATCTGAA------TTTAGT 126
consensus_8992#4      GGAGTTAA---ATGAACCATT-ATC-ACGCCTCAGGATGTAGGCCGAG------ATTC-T 55
consensus_8992#0      GGAAATGAGGCATGAGGCTTA-ATAGACATTAAAGGCGGTATTGAGGACATATCATTTCT 298
consensus_8992#1      ACAACTATTACATGTATACTATGGCAGGATCAATTAGTAAGTCACTATCTTATCATTGCC 239
                           *       *                                         **   
consensus_8992#2      TTAG-GGTTAGAAAAATAAAACTTGAGCAACTCACAAGAATTTAGGACATTTGAGCTTCT 197
consensus_8992#3      TTAGTGGTTAGGAACCCACTGTTACATTATTAGACGGAAA----GACCCCAAGAGCTTTT 182
consensus_8992#4      TCGGAAGTTACGAGTGCGATGCTCCTTCTAACAACCAGAG---------CAACAATTTTT 106
consensus_8992#0      TTTGTGGTAA--AAAGTGGTTCCACATCGAGAGGCACGCGTGT-TACTACGATAGGCACT 355
consensus_8992#1      GCCCGATTTGACGTTTGACTAACTGTCCGTGCGACCTCAGTGGTTGATTCGGGTGATGCT 299
                             *                          *                        *
consensus_8992#2      TTTGATCTGCCTTAATTGATCATCATCCATA--AGATTAGT----GAGTTATCTGTCTAT 251
consensus_8992#3      GTTG---TGTTAGATTTGNTTGGNGTAAATGT-AGATTATT----CATTTATTTNTAGAT 234
consensus_8992#4      ATAGG--TACATGGAACGTCCGGACAATGTG--AGAGACCG----GGAAGATCAGTCAAA 158
consensus_8992#0      ATGTTGGTTTGTGGAACTTCCACCTGACAAGTGAGACTTTT----CATTTTTCTGAACAG 411
consensus_8992#1      CGCCAA-AGTTTCAATTCAGTGCCATACATAATCAATGCGTATGAGGTGTATATACGTAC 358
                                                         *               *      * 
consensus_8992#2      TTGGAATAAGAA-AAATAAAAGGACAGAAA--TAATGTCGTTTTAACGATTAGAGGAATT 308
consensus_8992#3      CCTTCATGG------ATAAAAGG------A--TAAAGNNACCTTGGCGGATAACTGAGTA 280
consensus_8992#4      TAGCAATGG----AAATGAGGAGATACAAA--TCG-GCGGTACTTGGGATTAGTGAAACC 211
consensus_8992#0      TTCCACTAATAACGGATGGGGAAGAAGAGACTTTAGAACATTCTGTTTGTAAAGCAATCC 471
consensus_8992#1      TGAAGATAAAAAGATACTGAGTAGTTGAACTTCAGCGTAACACAAGTTATTGCTTTAATC 418
                            *        *                                        *   
consensus_8992#2      CG--------AAATCTGAAAGTGATGGTAAGGAGCAGAAAGCCATGATTAATAATCGACT 360
consensus_8992#3      AA--------GGACAGGGAGAGNGTCCTATTGATCTGT---TTATTACTACC--TCGAT- 326
consensus_8992#4      CATT------GGACACAAGTTGGACAGCAGAAGCTAGA----TACGGGAGAGATGC---- 257
consensus_8992#0      CACCAGCAGCAGGTCTTGAACTGGTACCAACCGCTTGCCGCCGACGCGTAAGAGACCGTG 531
consensus_8992#1      CAAAGCTTCGTAATCTTAAGAATAT-TTATTTAGAAGGAAAAAAAAATTATTTGTTTAAG 477
                                                  *       *      *                
consensus_8992#2      TCTTTTGTAGGCTGTATTATCCTTAGATTATTATCCTATCTCGTACATCGATCACAC--- 417
consensus_8992#3      ------------------------------------------------------------
consensus_8992#4      ------------------------------------------------------------
consensus_8992#0      AGTTCATGTTATTTTCATCAAGCGGATCGTTAGCAGTATTTGAAACAACTTCACTATTGT 591
consensus_8992#1      TGGAACATAGAAGTNTTTTGTTTCTAATTGTAGACTTTGGATAAAATATGTTTAGATGGA 537
                                                                                  
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#4      ------------------------------------------------------------
consensus_8992#0      TGCTTTGCTTTCCTTGATCAACAAAATCAACAGCAGAATCAGTATGACCACCATTACCAC 651
consensus_8992#1      CAAGAAGAG--------------------------------------------------- 546
                                                                                  
consensus_8992#2      --------------------
consensus_8992#3      --------------------
consensus_8992#4      --------------------
consensus_8992#0      TACATTGATTGCCACCACGA 671
consensus_8992#1      --------------------
                                          
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||