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Schistosoma mansoni
cluster # 9061 cluster # 9061       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9061#0 length = 1110 sequences # 8  

consensusID : consensus_9061#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1110
fasta sequence
                              [TTACCTTCAATTTTGCTCAGTTCATAGCTAAATTCAATCAAATACTTTCCATAACCTTTTCGTTGAAAAGGTGGAAGTACTAAGATGCATGCCACGTTGTAGTCTTCAGAGGATTCTTTTTCTTTTGAGAAATATCCAACCAGATGGTAACCACGAGAGTCTACTTCACAAAGAACATAAAACAAAAATGGATCTGTGTCGTAATATAAAGTTTTGTGATCCAAGAACAGTTTCGCAAGAAGACAAAGGTGTTGTGCGTAAGTTTTATTTTTACGCCCATCGATCTCGAAAAAACTGTAAGGCAGTTTGCGGTAAACCTCGTTCCCAGGAGGATTTCTTAGTGTACATTTAGCCAGGTGTCTGCGCAGACAAGTGAAACTCTTCAAATACTTCAAACAGAATTCGCATATATATACACACGGAACGCTTGCTAATTCCTGTGGATATGGGGAAAAGTACCATGGTTTAAATTCGATATCTTCCTAATTCAATCCATTCCAGATTTCTCATTCTTGTAACAGTATCTTGTTCATGGTGGCTAGAAACCATACTACCTGTTTGCCTGGGTTTTCCAGCAGAAGTTGGAGAGTCATCAAACACAAGATCATTCAAGTCGTTCTGCAGCGTCAAATGTATAGGTCCTTCATAGATATCGTCAGGGGGTCGTTTTCTTTTGAGTTGGGTCAAACTAGAGGAGCTGGAGCTACGATATTTTAGAGGAGGGTTCAGGTCCGATTCTGAAGTTCGGAGCTCCGCTGAACTAATAACTTCATCCTCAGTGGAGGATAAGCTGAAAACAGGAGTAACAGGTTCTTTCGTAGATTTCTTCAATGGTCGTTCTATTCTAGAAAAGTCGAGGCGATCAGCACTGACCCATTCATCCAGCCGTTTGTTATAGTCATCATAGTGAACGTAGTAGTATGTACAATCACCTACATCACGGGTACCCAAAATCTCGGCATTATGGAAAAAGTCAGAATCCGGTAGTTTTACCGGTAGTTTGCAACCCTCAATATTCTTTTTTGAGTTAGAAACGACCATAGTTAAGAAGAATGGCCAAACAAGCAAAGCAACATCAGCTCAAGACATGTACCGCAATATATATAATTC]

[-] EMBL CD145552             [TTACCTTCAATTTTGCTCAGTTCATAGCTAAATTCAATCAAATACTTTCCATAACCTTTTCGTTGAAAAGGTGGAAGTACTAAGATGCATGCCACGTTGTAGTCTTCAGAGGATTCTTTTTCTTTTGAGAAATATCCAACCAGATGGTAACCACGAGAGTCTACTTCACAAAGAACATAAAACAAAAATGGATCTGTGTCGTAATATAAAGTTTTGTGATCCAAGAACAGTTTCGCAAGAAGACAAAGGTGTTGTGCGTAAGTTTTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD152644             [                                                                                                                        TCTTTTGAGAAATATCCAACCAGATGGTAACCACGAGAGTCTACTTCACAAAGAACATAAAACAAAAATGGATCTGTGTCGTAATATAAAGTTTTGTGATCCAAGAACAGTTTCGCAAGAAGACAAAGGTGTTGTGCGTAAGTTTTATTTTTACGCCCATCGATCTCGAAAAAACTGTAAGGCAGTTTGCGGTAAACCTCGTTCCCAGGAGGATTTCTTAGTGTACATTTAGCCAGGTGTCTGCGCAGACAAGTGAAACTCTTCAAATACTTCAAACAGAATTCGCATATATATACACACGGAACGCTTGCTAATTCCTGTGGATATGGGGAAAAGTACCATGGTTTAAATTCGATATCTTCCTAATTCAATCCATTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD094455             [                                                                                                                                                                                                                                                                                                                                                                                      GAAACTCTTCAAATACTTCAAACAGAATTCGCATATATATACACACGGAACGCTTGCTAATTCCTGTGGATATGGGGAAAAGTACCATGGTTT AATTCGATATCTTCCTAATTCAATCCATTCCAGATTTCTCATTCTTGTAACAGTATCTTGTTCATGGTGGCTAGAAACCATACTACCTGTTTGCCTGGGTTTTCCAGCAGAAGTTGGAGAGTCATCAAACACAAGATCATTCAAGTCGTTCTGCAGCGTCAAATGTATAGGTCCTTCATAGATATCGTCAGGGGGTCGTTTTCTTTTGAGTTGGGTCAAACTAGAGGAGCTGGAGCTACGATATTTTAGAGGAGGGTTCAGGTCCGATTCTGAAGTTCGGAGCTCCGCTGAACTAATAACTTCGTCCTCAGTGGAGGATAAGCTGAAAACAGGAGTAACAGGTTCTTTCGTAGATTTCTTCAATGGTCGNTCTATTCTAGAAAAGTCGAGGCGA                                                                                                                                                                                                                                                        ]
[+] EMBL BG930411             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGGGTCGTTTTCTTTTGAGTTGGGTCAAACTAGAGGAGCTGGAGCTACGATATTTTAGAGGAGGGTTCAGGTCCGATTCTGAAGTTCGGAGCTCCGCTGAACTAATAACTTCATCCTCAGTGGAGGATAAGCTGAAAACAGGAGTAACAGGTTCTTTCGTAGATTTCTTCAATGGTCGTTCTATTCTAGAAAAGTCGAGGCGATCAGCACTGA                                                                                                                                                                                                                                              ]
[+] EMBL BG930536             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTCGTTTTCTTTTGAGTTGGGTCAAACTAGAGGAGCTGGAGCTACGATATTTTAGAGGAGGGTTCAGGTCCGATTCTGAAGTTCGGAGCTCCGCTGAACTAATAACTTCATCCTCAGTGGAGGATAAGCTGAAAACAGGAGTAACAGGTTCTTTCGTAGATTTCTTCAATGGTCGTTCTATTCTAGAAAAGTCGAGGCGATCAGCACTGA                                                                                                                                                                                                                                              ]
[+] EMBL BG930445             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTCGTTTTCTTTTGAGTTGGGTCAAACTAGAGGAGCTGGAGCTACGATATTTTAGAGGAGGGTTCAGGTCCGATTCTGAAGTTCGGAGCTCCGCTGAACTAATAACTTCATCCTCAGCGGAGGATAAGCTGAAAACAGGAGTAACAGGTTCTTTCGTAGATTTCTTCAATGGTCGTTCTATTCCAGAAAAGTCGAGGCGATCAGCACTGA                                                                                                                                                                                                                                              ]
[-] EMBL CD200710             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGGAGCTGGAGCTACGATATTTTAGAGGAGGGTTCAGGTCCGATTCTGAAGTTCGGAGCTCCGCTGAACTAATAACTTCATCCTCAGTGGAGGATAAGCTGAAAACAGGAGTAACAGGTTCTTTCGTAGATTTCTTCAATGGTCGTTCTATTCTAGAAAAGTCGAGGCGATCAGCACTGACCCATTCATCCAGCCGTTTGTTATAGTCATCATAGTGAACGTAGTAGTATGTACAATCACCTACATCACGGGTACCCAAAATCTCGGCATTATGGAAAAAGTCAGAATCCGGTAGTTTTACCGGTAGTTTGCAACCCTCAATATTCTTTTTTGAGTTAGAAACGACCATAGTTAAGAAGAATGGCCAAACAAGCAAAGCAACATCAGCTCAAGACATGTACCGCAATATATATAATTC]
[-] EMBL CD094590             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATAGTGAACGTAGTAGTATGTACAATCACCTACATCACGGGTACCCANAATCTCGGCATTATGGAAANAGTCAGAATCCGGTAGTTTTACCGGTAGTTTGCAACCCTCAATATTCTTTTTTGAGTTAGAAACGACCATAGTTAAGAAGAATGGTCAAACAAGGAAAGCAACATCAGCTCAAGACATGTACCGCAATATA        ]


>consensus_9061#0 TTACCTTCAATTTTGCTCAGTTCATAGCTAAATTCAATCAAATACTTTCCATAACCTTTT CGTTGAAAAGGTGGAAGTACTAAGATGCATGCCACGTTGTAGTCTTCAGAGGATTCTTTT TCTTTTGAGAAATATCCAACCAGATGGTAACCACGAGAGTCTACTTCACAAAGAACATAA AACAAAAATGGATCTGTGTCGTAATATAAAGTTTTGTGATCCAAGAACAGTTTCGCAAGA AGACAAAGGTGTTGTGCGTAAGTTTTATTTTTACGCCCATCGATCTCGAAAAAACTGTAA GGCAGTTTGCGGTAAACCTCGTTCCCAGGAGGATTTCTTAGTGTACATTTAGCCAGGTGT CTGCGCAGACAAGTGAAACTCTTCAAATACTTCAAACAGAATTCGCATATATATACACAC GGAACGCTTGCTAATTCCTGTGGATATGGGGAAAAGTACCATGGTTTAAATTCGATATCT TCCTAATTCAATCCATTCCAGATTTCTCATTCTTGTAACAGTATCTTGTTCATGGTGGCT AGAAACCATACTACCTGTTTGCCTGGGTTTTCCAGCAGAAGTTGGAGAGTCATCAAACAC AAGATCATTCAAGTCGTTCTGCAGCGTCAAATGTATAGGTCCTTCATAGATATCGTCAGG GGGTCGTTTTCTTTTGAGTTGGGTCAAACTAGAGGAGCTGGAGCTACGATATTTTAGAGG AGGGTTCAGGTCCGATTCTGAAGTTCGGAGCTCCGCTGAACTAATAACTTCATCCTCAGT GGAGGATAAGCTGAAAACAGGAGTAACAGGTTCTTTCGTAGATTTCTTCAATGGTCGTTC TATTCTAGAAAAGTCGAGGCGATCAGCACTGACCCATTCATCCAGCCGTTTGTTATAGTC ATCATAGTGAACGTAGTAGTATGTACAATCACCTACATCACGGGTACCCAAAATCTCGGC ATTATGGAAAAAGTCAGAATCCGGTAGTTTTACCGGTAGTTTGCAACCCTCAATATTCTT TTTTGAGTTAGAAACGACCATAGTTAAGAAGAATGGCCAAACAAGCAAAGCAACATCAGC TCAAGACATGTACCGCAATATATATAATTC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)