These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9065#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1010 fasta sequence [GATGAACTTCCTTTGTCTCTTCTCGAGACAGATGCAACCGTTAGCCAAACAAGCAGTACAGCCGTCACAATAGGAAGTACTACAGATTTGGATATTAGATCGGAATTATCATCTAATCTGAATGTTGAACTTCACCCAACATCTAGTTATTCGACAAATGTGGTACCTTCTGAATTGTGTGCTTCTGAAGTATCTAATCATCAACGAGAGGAAATCGGATTTAGTAGACTGCTCAATTCTGACGTTGATCTCTATCAGTCATCATTGTCTATTCAAGAAGGACCTTCATCCGGGCGAACTGGTGATGCAGCTAATGGACCGCAAAATAATATACAGTTTTCTGTTTCCGAACAGTCTAATGCTTTCCAGGCCGAAGATGTCTCTGATGGTCAAGCTTCAGATTATGATGAGTATGATGAACAAGATGATGGTGATGATGGTGAAGATCATGAGGAAGACGATGATGAAAATGAAACGGAAGATGAAGATGGTGACCAAGATGTTTACGGTGGTGACCAGCTTATAGAAGGGGAAGATGATGAAGACGATGAGGATGATGAAGATGATTCTTCTCATCACAGTGATGAATCAAGTGCAGACGCTGGAAGTCGATCAACCTCTCCCACTTGGGTTTCATGGCCAAGGACATCTATATTTTCTCGCTTAAGTTCGCGAGCGGTCTCACAGAGTTCTGAATCCATATCTACTACTTCAAATACCACAGATGCCTTAAACAGCAATCGGGACAACACCAACGAGCTAAATACTGTTACAACAGGTCAAAGTTTGACCAATCTAACTTCCGTCACTGTCCAAGGGCGCAACACCTCGAGTTTACTGTCAGGTCGTCGCTCTGTTCAGTCAGTTATTAGTTTACTGAATACATCAACATCTGCGACACCGACTTTAGTCATTTCAAGTACGGGAAATGTAAGCAACACACCTGCCCCTAGTGAAACTGTTGTTACCAACAC-CACCATCTCAGTCACTACTCCAACTGTTTCTACAAA] [+] EMBL CD169047 [GATGAACTTCCTTTGTCTCTTCTCGAGACAGATGCAACCGTTAGCCAAACAAGCAGTACAGCCGTCACAATAGGAAGTACTACAGATTTGGATATTAGATCGGAATTATCATCTAATCTGAATGTTGAACTTCACCCAACATCTAGTTATTCGACAAATGTGGTACCTTCTGAATTGTGTGCTTCTGAAGTATCTAATCATCAACGAGAGGAAATCGGATTTAGTAGACTGCTCAATTCTGACGTTGATCTCTATCAGTCATCATTGTCTATTCAAGAAGGACCTTCATCCGGGCGAACTGGTGATGCAGCTAATGGACCGCAAAATAATATACAGTTTTCTGTTTCCGAACAGTCTAATGCTTTCCAGGCCGAAGATGTCTCTGATGGTCAAGCTTCAGATTATGATGAGTATGATGAACAAGATGATGGTGATGATGGTGAAGATCATGAGGAAGACGATGATGAAAATGAAACGGAAGATGAAGATGGTGACCAAGATGTTTACG ] [+] EMBL CD152051 [ CGTTAGCCATACAAGCAGTACAGACGTCACAATAGGAAGTACTACAGATTTGGATATTAGATCGGAATTATCATCTAATCTGAATGTTGAACTTCACCCAACTTCTAGTTATTCGACAAATGTGGTACCTTCTGAATTGTGTGCTTCTGAAGTATCTAATCATCAACGAGAGGAAATCGGATTTAGTAGACTGCTCAATTCTGACGTTGATCTCTATCAGTCATCATTGTCTATTCAAGAAGGACCTTCATCCGTGCGAACTGGTGATGCAGCTAATGGACCGCGAAATAATATACAGn ] [+] EMBL CD152010 [ AAACAAGCAGTACAGCCGTCACAATAGGAAGTACTACAGATTTGGATATTAGATCGGAATTATCATCTAATCTGAATGTTGAACTTCACCCAACATCTAGTTATTCGACAAATGTGGTACCTTCTGAATTGTGTGCTTCTGAAGTATCTAATCATCAACGAGAGGAAATCGGATTTAGTAGACTGCTCAATTCTGACGTTGATCTCTATCAGTCATCATTGTCTATTCAAGAAGGACCTTCATCNCGGCGAACTGATGATGCAGCTAATGGA ] [+] EMBL CD152083 [ GTACTACAGATTTGGATATTAGATCGGTATTATCATCTAATCTGAATGTTGAACTTCACCCAACATCTAGTTATTCGACAAATGTGGTACCTTCTGAATTGTGTGCTTCTGAAGTATCTAATCATCAACGAGAGGAAATCGGATTTAGTAGACTGCTCAATTCTGACGTTGATCTCTATCAGTCATCATTGTCTATTCAAGAAGGACCTTCATCCGGGCGAACTGGTGATGCAGCTAATGGACCGCGANATAATATACAGTTTTCTGTTTCCGAACAG ] [-] EMBL CD151997 [ ATTTAGTAGACTGCTCAATTCTGACGTTGATCTCTATCAGTCATCATTGTCTATTCAAGAAGGACCTTCATCCGGGCGAACTGGTGATGCAGCTAATGGACCGCAAAATAATATACAGTTTTCTGTTTCCGAACAGTCTAATGCTTTCCAGGCCGAAGATGTCTCTGATGGTCAAGCTTCAGATTATGATGAGTATGATGAACAAGATGATGGTGATGATGGTGAAGATCATGAGGAAGACGATGATGAGAATGAAACGG ] [+] EMBL CD163625 [ AATGAAACGGAAGATGAAGATGGTGACCAAGATGTTTACGGTGGTGACCAGCTTATAGAAGGGGAAGATGATGAAGACGATGAGGATGATGAAGATGATTCTTCTCATCACAGTGATGAATCAAGTGCAGACGCTGGAAGTCGATCAACCTCTCCCACTTGGGTTTCATGGCCAAGGACATCTATATTTTCTCGCTTAAGTTCGCGAGCGGTCTCACAGAGTTCTGAATCCATATCTACTACTTCAAATACCACAGATGCCTTAAACAGCAATCGGGACAACACCAACGAGCTAAATACTGTTACAACAGGTCAAAGTTTGACCAATCTAACTTCCGTCACTGTCCAAGGGCGCAACACCTCGAGTTTACTGTCAGGTCGTCGCTCTGTTCAGTCAGTTATTAGTTTACTGAATACATCAACATCTGC ] [-] EMBL CD163590 [ CCAGCTGATAGAAGGGGAAGATGATGAAGACGATGAGGATGATGAAGATGATTCTTCTCATCACAGTGATGAATCAAGTGCAGACGCTGGAAGTCGATCAACCTCTCCCACTTGGGTTTCATGGCCAAGGACATCTATATTTTCTCGCTTAAGTTCGCGAGCGGTCTCACAGAGTTCTGAATCCATATCTACTACTTCAAATACCACAGATGCCTTAAACAGCAATCGGGACAACACCAACGAGCTAAATACTGTTACAACAGGTCAAAGTTTGACCAATCTAACTTCCGTCACTGTCCAAGGGCGCAACACCTCGAGTTTACTGTCGGGTCGTCGCTCTGTTCAGTCAGTTATTAGTTTACTGAATACATCAACATCTGCGACACCGACTTTAGTCATTTCAAGTACGGGAAATGTAAGCAACACACCTGCCCCTAGTGAAACTGTTGTTACCAACACGCACCATCTCAGTCACTACTCCAACTGTTTCTACAAA] [-] EMBL CD163682 [ GATGAAGATGATTCTTCTCATCACAGTGATGAATCAAGTGCAGACGCTGGAAGTCGATCAACCTCTCCCACTTGGGTTTCATGGCCAAGGACATCTATATTTTCTCGCTTAAGTTCGCGAGCGGTCTCACAGAGTTCTGAATCCATATCTACTACTTCAAATACCACAGATGCCTTAAACAGCAATCGGGACAACACCAACGAGCTAAATACTGTTACAACAGGTCAAAGTTTGACCAATCTAACTTCCGTCACTGTCCAAGGGCGCAACACCTCGAGTTTACTGTCAGGTCGTCGCTCTGTTCAGTCAGTTATTAGTTTACTGAATACATCAACATCTGCGACACCGACTTTAGTCATTTCAAGTACGGGAAATGTAAGCAACACACCTGCCCCTAGTGAAACTGTTGTTACAAACGC CACCAGCTCTGTCACTACTCCAACTGTT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||