These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9116#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 662 fasta sequence [TTTGTTAAAGAGTATTATTGCTAAAAATGCTCAAGTAACTAGAAGAAAAATA-TCCAGGGGACAAAAGTTGGTACACAACTAGTAAGGTAGAA-CAAAAAATTTAAAATCAGTACATTTTGGAAATAACTGTGACAAAGCCACAGGTAATATGATATAAACTACTACATGGACTTAGTTTGTTTT-AACATGATAAACCAACAAATACGCCGAATAAATGTTTGCATACGCAGATATGTTCTAAATCCAAGTGATACAAGAGAAATGAGGGTT-CCCTGACTATTGAGTTTACTGTTTTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATATGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGTTAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATATGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTATCAACGGCTCCAATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGCANAA] [+] EMBL AA999405 [TTTGTTAAAGAGTATTATTGCTAAAAATGCTCAAGTAACTAGAAGAAAAATA TCCAGGGGACAAAAGTTGGTACACAACTAGTAAGGTAGAA CAAAAAATTTAAAATCAGTACATTTTGGAAATAACTGTGACAAACCCAC ] [-] EMBL AA559635 [ ATTGCTAAAAATGCTCAAGTAACTAGAAGAAAAATATTCCAGGGGACAAAAGTTGGTACACAACTAGTAAGGTAGAACCAAAAAATTTAAAATCAGTACATTTTGGAAATAACTGTGACAAAGCCACAGGTAATATGATATAAACTACTACATGGACTTAGTTTGTTTTAAACATGATAAACCAACAAATACGCCGAATAAATGTTTGCATATGCAGATATGTTCTAAATCCAAGTGATACAAGAGAAATGAGGGTTNCCCTGACTATTGAGCTTA ] [+] EMBL CD134272 [ A TCCACGGGACAATAGTTGATACACAACTAGTAAGGTAGAA CAAAAAATTTAAAATCAGTACATTTTGGAAATAACTGTGACAAAGCCACAGGTAATATGATATAAACTACTACATGGACTTAGTTTGTTTT AACATGATAAACCAACAAATACGCCGAATAAATGTTTGCATACGCAGATATGTTCTAAATCCAAGTGATACAAGAGAAATGAGGGTT CCCTGACTATTGAGTTTACTGTTTTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGA ] [+] EMBL CD189744 [ TTGATACACAACTAGTAAGGTAGAA CAAAAAATTTAAAATCAGTACATTTTGGAAATAACTGTGACAAAGCCACAGGTAATATGATATAAACTACTACATGGACTTAGTTTGTTTT AACATGATAAACCAACAAATACGCCGAATAAATGTTTGCATACGCAGATATGTTCTAAATCCAAGTGATACAAGAGAAATGAGGGTT CCCTGACTATTGAGTTTACTGTTTTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATATGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGTTAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATATGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTATCAACGGCTCCAATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGCANAA] [+] EMBL CD097987 [ CTGTTTTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATATGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGTTAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATATGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTATCAACGGCTCCCATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGC ] [+] EMBL CD098139 [ CTGTTTTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATATGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGTTAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATATGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTATCAACGGCTCCAATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGC ] [+] EMBL CD145100 [ TTCTATTTGGAGCTTTCATAACGAGCGATTCTCGCTAGCTGATATAAACCAGTTAGAGCAACAAAGGCGTTTACACTGAGAAGGTTGTAATTTTTAGGGATAATAACCAAAGAATATCGAGACCATATGAGACCAGTTGCAGCGAGTGCTGTACTTTGGTATAAACTGACGTTCTCGACTGGTCGGTTAATATCTGCTAAACCAGCTATTACAAGAAGCCATTTAAAAGTAGGCGCCCAGAAAAATATGGTTTTAGGTCCCGCAGGATGATTCCACAAAGGTTTGAGTCGAGCAGGAACCTTTTTAT ] [-] EMBL CD136483 [ GAGTCGAGCAGGAACCTTTTTATCAACGGCTCCAATCAATGCCCGGTAAACTGCTGACATCTGTCCGGTAATTTACGCGGCA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||