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Schistosoma mansoni
cluster # 9134 cluster # 9134       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9134#0 length = 1476 sequences # 8  

consensusID : consensus_9134#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1476
fasta sequence
                              [TCATCATTTTTAGAAGTACAACTCAATCTAGACTATCGACGAAAATGGGATGATAAGATTGTAGAATTGCATTGTATTACACCGAATAACGATACACATATTAAAGATTTAGATATTATTCGTTGGGTTGTACGTTTTCCATTTCCTATGGTCGATCGAGAATATGTTTACGTACGACGTTGGTGGATTCAACCTACTGAATTTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAAGATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACTAGACGCTATGCCTATCTAATTTCTCGATGCTCAGCAGATTTCAAAGAAAAATGTACCCAATCTTCTGATATTTCTTCTGTAAAGTCTTCGTGGGAAAACATAAAGAAACGGGGTCTTGTTCAAGTTCATGAATATCATTCTGAAATGTTAATTGAGTCACATGGAGAATTCAACCAAAATGGACTGAATTACTATTTAATTTATTATGATGATCCCTGTCTTCCGATTAATGGATCGCCAATAAAATTATTTTCTGTCAGAGCTATTGAAGAATTTATGACAAAACTTCATAAAGCTGCATTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAATAGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCANATCCAGATCT-ATTCAATGCATCAAAGTTAATATCACCATCATCATCATCATCATCATCATCAACATCACCTACAACGAAGAAACAATTTAGTGGTATAAAACTCA-ATTCTTATTTCTTCACTGATCGTCATCCTTCAGAATTGAATAACAATTACATTGATTCAACTGCAGCCGCCTTATCCTAGTAATAGCACCTCCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTCTTCTC-TTTTTTTCTAGTGAAAGAAATAT-GTTTACTTCACTATTCCTTCCTG-TTTTTTTTCAAGTATTTATGAATAAGACAGATG-GTTGGTATGTTTATTACTACTGCTGCCACCACCACTAAGGAGAGTACCTTTTCATGCTCTCAATAAAAAGAACTTTCGCTTTATTTTTAAACATACATACTGATTATACACTTTGAAATGTGACTTTGATGAAAAACATTTGTAATCTTGTGATTGAAGCATATTTGGGATAGTCCCTATGTAGTGTTTGTTTTGTCATTTAGATCTACTCACATTATGTCTACTCAATTGTATCTAGACACAGAAATAGTTAGATGAATATATGTATACATTGATATATATATATATATATATCAATGTATATATGTAGAGAGCTAACATCAATGTATTCACTTTTCATGTTGCTTTTCTTTGTATATGCATATTCTGTATATTATTTATTTATATAAAAATGTAAGTACAATTGTGTATAGTGATTAATATAAGAAGTTA]

[-] EMBL CD181781             [TCATCATTTTTAGAAGTACAACTCAATCTAGACTATCGACGAAAATGGGATGATAAGATTGTAGAATTGCATTGTATTACACCGAATAACGATACACATATTAAAGATTTAGATATTATTCGTTGGGTTGTACGTTTTCCATTTCCTATGGTCGATCGAGAATATGTTTACGTACGACGTTGGTGGATTCAACCTACTGAATTTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAAGATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACTAGACGCTATGCCTATCTAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD080094             [                                                                                                                              GTTGTACGTTTTCCATTTCCTATGGTCGATCGAGAATATGTTTACGTACGACGTTGGTGGATTCAACCTACTGAATTTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAAGATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACTAGACGCTATGCCTATCTAATTTCTCGATGCTCAGCAGATTTCAAAGAAAAATGTACCCAATCTTCTGATATTTCTTCTGTAAAGTCTTCGTGGGAAAACATAAAGAAACGGGGTCTTGTTCAAGTTCATGAATATCATTCTGAAATGTTAATTGAGTCACATGGAGAATTCAACCAAAATGGACTGAATTACTATTTAATTTATTATGATGATCCCTGTCTTCCGATTAATGGATCGCCAATAAAATTATTTTCTGTCAGAGCTATTGAAGAATTTATGACAAAACTTCATAAAGCTGCATTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAATAGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCANATCCAGATCT ATTCAATGCATCAAAGTTAATATCACCATCATCATCATCATCATCATCATCAACATCACCTACAACGAAGAAACAATTTAGTGGTAAAAAACTCA ATTCTTATTTCTTCACTGATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD079444             [                                                                                                                              GTTGTACGTTTTCCATTTCCTATGGTCGATCGAGAATATGTTTACGTACGACGTTGGTGGATTCAACCTACTGAATTTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAAGATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACTAGACGCTATGCCTATCTAATTTCTCGATGCTCAGCAGATTTCAAAGAAAAATGTACCCAATCTTCTGATATTTCTTCTGTAAAGTCTTCGTGGGAAAACATAAAGAAACGGGGTCTTGTTCAAGTTCATGAATATCATTCTGAAATGTTAATTGAGTCACATGGAGAATTCAACCAAAATGGACTGAATTACTATTTAATTTATTATGATGATCCCTGTCTTCCGATTAATGGATCGCCAATAAAATTATTTTCTGTCAGAGCTATTGAAGAATTTATGACAAAACTTCATAAAGCTGCATTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAATAGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCANATCCAGATCT ATTCAATGCATCANAGTTAATATCACCATCATCATCATCATCATCATCATCAACATCACCTANCACGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD111365             [                                                                                                                                                                                                          TTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAAGATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACTAGACGCTATGCCTATCTAATTTCTCGATGCTCAGCAGATTTCAAAGAAAAATGTACCCAATCTTCTGATATTTCTTCTGTAAAGTCTTCGTGGGAAAACATAAAGAAACGGGGTCTTGTTCAAGTTCATGAACATCATTCTGAAATGTTAATTGAGTCACATGGAGAATTCAACCAAAATGGACTGAATTACTATTTAATTTATTATGATGATCCCTGTCTTCCGATTAATGGATCGCCAATAAAATTATTTTCTGTCAGAGCTATTGAAGAATTTATGACAAAACTTCATAAAGCTGC TTTCAATTATGCCATGTAGGCCTACCTATTGGTATTCGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI740403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAAAGCTGCATTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAATAGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCAAATCCAGATCT ATTCAATGCATCAAAGTTAATATCAC         CATCATCATCATCATCAACATCACCTACAACGAAGAAACAATTTAGTGGTATACNACTCA ATTCTTATTTCTTCACTGATCGTCATCCTTCAGAATTGGGTCNCAATTACATTGATTCAACTGCAGCCGCCTTATCCTAGTAATAGCACCTCCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTCTTCTCTTTTTTTTCTAGTGAAAGAAATATNGTTTACTTtca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AI026171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAAAGCTGCATTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAATAGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCAAATCCAGATCTAAACCAATGCATCAAAGTTAATATCAC         CATCATCATCATCATCAACATCACCTACAACGAAGAAACAATTTAGTGGTTTTGCCCACATATTCTTATTTCTTCACTGATCGTCATCCTTCAGAATTGCATAACAATTACATTGATTCAACTGCAGCCGCCTTATCCTAGTAATAGCACCCTCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTCTTCTC TTTTTTTCTAGTGAAAGAAATAT GTTTACTTCACTATTCCTTCCTGTTTTTTTTTCAAGTATTTATGAATAAGACAGATGAATTGGTATGTTTATTACTACTGCTGCCACCACCACTAAGGGGGGTA CTTTTCcagccc                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD073714             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTCACTGATCGTCATCCTTCAGAATTGAATAACAATTACATTGATTCAACTGCAGCCGCCTTATCCTAGTAATAGCAATTCCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTCTTCTC TTTTTTTCTAGTGAAAGAAATAT GTTTACTTCACTATTCCTTCCTG TTTTTTTTCAAGTATTTATGAATAAGACAGATG GTTGGTATGTTTATTACTACTGCTGCCACCACCACTAAGGAGAGTACCTTTTCATGCTCTCAATAAAAAGAACTTTCGCTTTATTTTTAAACATACATACTGATTATACACTTTGAAATGTGACTTTGATGAAAAACATTTGTAATCTTGTGATTGAAGCATATTTGGGATAGTCCCTATGTAGTGTTTGTTTTGTCATTTAGATCTACTCACATTATGTCTACTCAATTGTATCTAGACACAGAAATAGTTAGATGAATATATGTATACATTGATATATATATATATATATATCAATGTATATATGTAGAGAGCTAACATCAATGTATTCACTTTTCATGTTGCTTTTCTTTGTATATGCATATTCTGTATATTATTTATTTATATAAAAATGTAAGTACAATTGTGTATAGTGATTAATATAAGAAGTTA]
[+] EMBL CD090446             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCACTGATCGTCATGCTTCAGAAATGAATAACAATTACATTGATTCAACTGCAGCCGCCTTATCCTAGTAATAGCAATTCCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTCTTCTC TTTTTTTCTAGTGAAAGAAATAT GTTTACTTCACTATTCCTTCCTG TTTTTTTTCAAGTATTTATGAATAAGACAGATG GTTGGTATGTTTATTACTACTGCTGCCACCACCACTAAGGAGAGTACCTTTTCATGCTCTCAATAAAAAGAACTTTCGCTTTATTTTTAGACATACATACTGATTATACACTTTGAAATGTGACTTTGATGAATAACATTTG                                                                                                                                                                                                                                                                                                  ]


>consensus_9134#0 TCATCATTTTTAGAAGTACAACTCAATCTAGACTATCGACGAAAATGGGATGATAAGATT GTAGAATTGCATTGTATTACACCGAATAACGATACACATATTAAAGATTTAGATATTATT CGTTGGGTTGTACGTTTTCCATTTCCTATGGTCGATCGAGAATATGTTTACGTACGACGT TGGTGGATTCAACCTACTGAATTTTCCTTGAATACGGAGAAATCACTTGCATCTCATAAA GATAATTCTTCAGAATCGATTCCTTTATCTCAAGACAATACAACTAAGAACATTTCTACT AGACGCTATGCCTATCTAATTTCTCGATGCTCAGCAGATTTCAAAGAAAAATGTACCCAA TCTTCTGATATTTCTTCTGTAAAGTCTTCGTGGGAAAACATAAAGAAACGGGGTCTTGTT CAAGTTCATGAATATCATTCTGAAATGTTAATTGAGTCACATGGAGAATTCAACCAAAAT GGACTGAATTACTATTTAATTTATTATGATGATCCCTGTCTTCCGATTAATGGATCGCCA ATAAAATTATTTTCTGTCAGAGCTATTGAAGAATTTATGACAAAACTTCATAAAGCTGCA TTGCAATTATGCCATGTAGGCCTACCTATTGGTATTCGCCCCATAATATATGATAATAAT AGTAATACTACTACTAATAATAACACCAATACTACTGATAGCGAAATAAAACTTGACCCA NATCCAGATCTATTCAATGCATCAAAGTTAATATCACCATCATCATCATCATCATCATCA TCAACATCACCTACAACGAAGAAACAATTTAGTGGTATAAAACTCAATTCTTATTTCTTC ACTGATCGTCATCCTTCAGAATTGAATAACAATTACATTGATTCAACTGCAGCCGCCTTA TCCTAGTAATAGCACCTCCTTTCTTTTGTTTATTTTTTTGCTCTGTTTAACTGTAGACTC TTCTCTTTTTTTCTAGTGAAAGAAATATGTTTACTTCACTATTCCTTCCTGTTTTTTTTC AAGTATTTATGAATAAGACAGATGGTTGGTATGTTTATTACTACTGCTGCCACCACCACT AAGGAGAGTACCTTTTCATGCTCTCAATAAAAAGAACTTTCGCTTTATTTTTAAACATAC ATACTGATTATACACTTTGAAATGTGACTTTGATGAAAAACATTTGTAATCTTGTGATTG AAGCATATTTGGGATAGTCCCTATGTAGTGTTTGTTTTGTCATTTAGATCTACTCACATT ATGTCTACTCAATTGTATCTAGACACAGAAATAGTTAGATGAATATATGTATACATTGAT ATATATATATATATATATCAATGTATATATGTAGAGAGCTAACATCAATGTATTCACTTT TCATGTTGCTTTTCTTTGTATATGCATATTCTGTATATTATTTATTTATATAAAAATGTA AGTACAATTGTGTATAGTGATTAATATAAGAAGTTA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)