These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9158#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 846 fasta sequence [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAGGTATAGCTTTATTTCAGGTTAA-GGCCAGTAAGCTCAGGGTTTTATGCTGGGTATTTCGCTTCGGTTGTCTGACGTTCGCGGGTTCTGCCGGGCGCCGCTTGGAGGGCGTTAGCCAGCTAGCATACGGGGATGAAGACGGTCATTCACGTTCCTGAAAATGACAGGCTTTCTCAGCGTGAGCAGGCGAGAGCTGCTTTCAGTGCACCGGCTGCGGCGCTGCGTGGCGATTCGTTCTCTATTGCGGCAGGCCCTGATGCAAATTCTTCAAAGGCGCAGGGGGATTAGTCCCCGCGCCCATTT] [+] EMBL CD118730 [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCGACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAGGTATAGCTTTATTTCAGGTTAA GGCCAGTAAGCTCAGGGGTTTATGCTGGGTATTTCGCTTCGGTTGTCTGACGTTCGCGGG ] [+] EMBL CD118806 [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTTTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTNTGATCAATTCTGACAAAGGAGCGGAATTTCGGCCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGCTCCCCTGAT ] [+] EMBL CD118768 [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCACGCCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAAGTATAGCTNTATTTCAGGTTAANNGCCAGT AGCTCAGGG ] [+] EMBL CD118780 [CATATTGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAGGTATAGCTTTATTCCAGGTTAA NGCCAGTAAG ] [+] EMBL CD118722 [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCGACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAAGTATAGCTTTATTTCAGGTTAA GGCC ] [+] EMBL CD118805 [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAGACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCGACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGACTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGNCATTTAGGTATAGCTTTATTTCAG ] [-] EMBL CD118904 [ GGTTGAGNACGCGCTTCAATGGATCATCTNGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCACGCCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTNTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAGGTATAGCTTTATTTCAGGTTAA GGCCAGTAAGCTCAGGGTTTTATGCTGGGTATTTCGCTTCGGTTGTCTGACGTTCGCGGGTTCTGCCGGGCGCCGCTTGGAGGGCGTTAGCCAGCTAGCATACGGGGATGAAGACGGTCATTCACGTTCCTGAAAATGACAGGCTTTCTCAGCGTGAGCAGGCGAGAGCTGCTTTCAGTGCACCGGCTGCGGCGCTGCGTGGCGATTCGTTCTCTATTGCGGCAGGCCCTGATGCAAATTCTTCAAAGGCGCAGGGGGATTAGTCCCCGCGCCCATTT] [-] EMBL CD118851 [ ACGTTGAACGTCACNCCACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGATGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAGGTATAGCTTTATTTCAGGTTAA GGCCAGTAAGCTCAGGGTTTTATGCTGGGTATTTCGCTTCGGTTGTCTGACGTTCGCGGGTTCTGCCGGGCGCCGCTTGGAGGGCGTTAGCCAGCTAGCATACGGGGATGAAGACGGTCATTCACGTTCCTGAAAATGACAGGCTTTCTCAGCGTGAGCAGGCGAGAGCTGCTTTCAGTGCACCGGCTGCGGCGCTGCGTGGCGATTCGTTCTCTATTGCGGCAGGCCCTGATG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||