Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9158 cluster # 9158       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9158#0 length = 846 sequences # 8  

consensusID : consensus_9158#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 846
fasta sequence
                              [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAGGTATAGCTTTATTTCAGGTTAA-GGCCAGTAAGCTCAGGGTTTTATGCTGGGTATTTCGCTTCGGTTGTCTGACGTTCGCGGGTTCTGCCGGGCGCCGCTTGGAGGGCGTTAGCCAGCTAGCATACGGGGATGAAGACGGTCATTCACGTTCCTGAAAATGACAGGCTTTCTCAGCGTGAGCAGGCGAGAGCTGCTTTCAGTGCACCGGCTGCGGCGCTGCGTGGCGATTCGTTCTCTATTGCGGCAGGCCCTGATGCAAATTCTTCAAAGGCGCAGGGGGATTAGTCCCCGCGCCCATTT]

[+] EMBL CD118730             [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCGACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAGGTATAGCTTTATTTCAGGTTAA GGCCAGTAAGCTCAGGGGTTTATGCTGGGTATTTCGCTTCGGTTGTCTGACGTTCGCGGG                                                                                                                                                                                                                          ]
[+] EMBL CD118806             [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTTTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTNTGATCAATTCTGACAAAGGAGCGGAATTTCGGCCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGCTCCCCTGAT                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD118768             [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCACGCCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAAGTATAGCTNTATTTCAGGTTAANNGCCAGT AGCTCAGGG                                                                                                                                                                                                                                                                     ]
[+] EMBL CD118780             [CATATTGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAGGTATAGCTTTATTCCAGGTTAA NGCCAGTAAG                                                                                                                                                                                                                                                                            ]
[+] EMBL CD118722             [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCGACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAAGTATAGCTTTATTTCAGGTTAA GGCC                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD118805             [CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTTGCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAGACACCGGCGTTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGGCTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGACGCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCGACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGACTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGNCATTTAGGTATAGCTTTATTTCAG                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD118904             [                                                                                                                                                                                                                                      GGTTGAGNACGCGCTTCAATGGATCATCTNGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCACGCCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTNTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAGGTATAGCTTTATTTCAGGTTAA GGCCAGTAAGCTCAGGGTTTTATGCTGGGTATTTCGCTTCGGTTGTCTGACGTTCGCGGGTTCTGCCGGGCGCCGCTTGGAGGGCGTTAGCCAGCTAGCATACGGGGATGAAGACGGTCATTCACGTTCCTGAAAATGACAGGCTTTCTCAGCGTGAGCAGGCGAGAGCTGCTTTCAGTGCACCGGCTGCGGCGCTGCGTGGCGATTCGTTCTCTATTGCGGCAGGCCCTGATGCAAATTCTTCAAAGGCGCAGGGGGATTAGTCCCCGCGCCCATTT]
[-] EMBL CD118851             [                                                                                                                                                                                                                                                                                         ACGTTGAACGTCACNCCACGTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGTTTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGTTGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAATTTCGGGCTAGTGATGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCAATTTAGGTATAGCTTTATTTCAGGTTAA GGCCAGTAAGCTCAGGGTTTTATGCTGGGTATTTCGCTTCGGTTGTCTGACGTTCGCGGGTTCTGCCGGGCGCCGCTTGGAGGGCGTTAGCCAGCTAGCATACGGGGATGAAGACGGTCATTCACGTTCCTGAAAATGACAGGCTTTCTCAGCGTGAGCAGGCGAGAGCTGCTTTCAGTGCACCGGCTGCGGCGCTGCGTGGCGATTCGTTCTCTATTGCGGCAGGCCCTGATG                                            ]


>consensus_9158#0 CATATCGCTGAAGACCCTGACCGCTACGCGTTTGCCGACACGGACCCCCGCGACTCGCTT GCCCGGGTTTCGATTCCAGGGCTCTGGCTGCTGGGTGGCAAGGACCTGCAAACACCGGCG TTCCTGGCGATGGAGCGGTTGGACGCAATGAGTGCCAAGGGCCAGGCATTTGGATACCGG CTCTATCCCGAGCTGGGGCACAACGTCACGCCCGGTGGCGTCGGCCAATCGGTTGAGGAC GCGCTTCAATGGATCATCTTGCGCTAGTGCATCTAGACCTTACGTTGAACGTCACCCCAC GTCGGTCTTCATCAGACCCATGCAGCGCGCTTTGTTTGACAGGCGTGGCCCGGTAGCGGT TTGCCGAGCCAGCTCAAGCAGAATTCATCGACTTCCACCCATGATTTGCCAGGCGATTGT TGGCATCGAATGAGCCCTGAGCAGACGCCGTTTTGATCAATTCTGACAAAGGAGCGGAAT TTCGGGCTAGTGAAGAAAAGTAACCTAAGGCACAGCATGATGTTCCCCTGATTGAGTGCA ATTTAGGTATAGCTTTATTTCAGGTTAAGGCCAGTAAGCTCAGGGTTTTATGCTGGGTAT TTCGCTTCGGTTGTCTGACGTTCGCGGGTTCTGCCGGGCGCCGCTTGGAGGGCGTTAGCC AGCTAGCATACGGGGATGAAGACGGTCATTCACGTTCCTGAAAATGACAGGCTTTCTCAG CGTGAGCAGGCGAGAGCTGCTTTCAGTGCACCGGCTGCGGCGCTGCGTGGCGATTCGTTC TCTATTGCGGCAGGCCCTGATGCAAATTCTTCAAAGGCGCAGGGGGATTAGTCCCCGCGC CCATTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)