These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9290#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 918 fasta sequence [CCTCCGAGCCAANAATTCGGCACGAGGAGAGTCCATTAATGGTATTGAAATGACTGTGACATATCCTGCAGAATCACATCACTTTACTAGATATGCCAACTCCTCTCGTCATATTATTCAGGAGACTCCTGCATTGTATAAGGATGTCATTCTCCCTTTTTTGTCCCAGAAACCCAAGGATCTTACTTGGATTGATAATGTAGTAGCAGGAATCGCTGAACAAGATCGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCACTAATGCATGTAGAGCACATATACTCGAAGAAGTTATTCGAAATCTCGAACAAGATGATTTATACTAT-GCAAATCGTACAATCACTATGTTTTTGCAT-GCTAATAAT-CCCATGTTTACAGCTATTTGTCA-GAACAGTTCCCACATATCCATTGT-CGATTCAGCTCCTGAATAAATTCCATATGTAGTGTCGTATTTTAG-AAGCAATGTAAGATTCCGCACTATTCAAACTTTGTAATAAAATCGTCTTAGTAAATAAAAATAAACTTATCCGAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA] [+] EMBL CD080517 [CCTCCGAGCCAANAATTCGGCACGAGGAGAGTCCATTAATGGTATTGAAATGACTGTGACATATCCTGCAGAATCACATCACTTTACTAGATATGCCAACTCCTCTCGTCATATTATTCAGGAGACTCCTGCATTGTATAAGGATGTCATTCTCCCTTTTTTGTCCCAGAAACCCAAGGATCTTACTTGGATTGATAATGTAGTAGCAGGAATCGCTGAACAAGATCGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCACTAATGCATGTAGAGCACATATACTCGAAGAAGTTATTCGAAATCTCGAACAAGATGATTTATACTATNGC AATCGTACAATCACTATGTTTTTGCAT GCTAATAATCCCCATG TTACAGCTATTTGTCA GAACAG TCCCACATATNCATTGT CGATTCAGCTCCTGAATAAA TCCATATGTAGTGTCGTA TTTAGAAAGC ATGT AGATTCCCGACTA TCAAACTTNGT ATANAATCG ] [-] EMBL CD156092 [ TACTAGATATGCCAACTCCTCTCGTCATATTATTCAGGAGACTCCTGCATTGTATAAGGATGTCATTCTCCCTTTTTTGTCCCAGAAACCCAAGGATCTTACTTGGATTGATAATGTAGTAGCAGGAATCGCTGAACAAGATCGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCA ] [-] EMBL CD155964 [ TACTAGATATGCCAACTCCTCTCGTCATATTATTCAGGAGACTCCTGCATTGTATAAGGATGTCATTCTCCCTTTTTTGTCCCAGAAACCCAAGGATCTTACTTGGATTGATAATGTAGTAGCAGGAATCGCTGAACAAGATCGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCACTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGGAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCA ] [-] EMBL CD060617 [ ATGTAGTAGCAGGAATCGCTGAACAAGATCGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTACTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCACTAATGCATGTAGAGCACATATACTCGAAGAAGTTATTCGAAATCTCGAACAAGATGATTTATACTAT GCAAtcacc ] [+] EMBL CD178774 [ CGTACTCTTCACAATGATGCTGATGAAATGTTTGGTTTTACATTAGTATTAGATTACCGATGGGATGGGTTACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTCTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACAT ] [-] EMBL CD074429 [ TACGCATTCAAGAACTTCATTGTTTGGGTATTGCTCATGACCAAAAGCTAACTTGTCTACGGGATCTCCGTAGCTGCCATGTTCCAATGCTAAAAAGAATTTTACAGCTAGGTCGTGATACACTCTTTCGCAAATATTCGAAGTCAGAAACATCCGACAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAGATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCACTAATGCATGTAGAGCACATATACTCGAAGAAGTTATTCGAAATCTCGAACAAGATGATTTATACTAT GCAAATCGTACAATCACTATGTTTTTGCAT GCTAATAAT CCCATGTTTACAGCTATTTGTCA GAACAGTTCCCACATATCCATTGT CGATTCAGCTCCTGAATAAATTCCATATGTAGTGTCGTATTTTAG AAGCAATGTAAGATTCCGCACTATTCAAACTTTGTAATAAAAT ] [-] EMBL AI977529 [ CATCCGGCAATCAAATGTCTGGTGATAATTCGAAAATTATTTTATCAAAAGACCAAATTCTTGCATATATACATTATCCACCGACCTTCTACAAATTTCATGTTCACTTTGTGCACATCGATTCTGGAGACAACTATGGCACTAATGCATGTAGAGCACATATACTCGAAGAAGTTATTCGAAATCTCGAACAAGATGATTTATACTAT GCAAATCGTACAATCACTATGTTTTTGCAT GCTAATAAT CCCATGTTTACAGCTATTTGTCA GAACAGTTCCCACATATCCATTGT CTATTCAGCTCCTGAATAAATTCCATATGTAGGGTCGTATTTTAG AAACAATGTAAGATTCCGCACTATTCAAACTTTGTAATAAAATGGTCTTAGTAAATAAAAATAAACTTATCCGAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA] [-] EMBL CD169495 [ ACTAT GCAAATCGTGCAATCACTATGTTTTTGCAT GCTAATAAT CCCATGTTTACAGCTATTTGTCA GAACAGTTCCCACATATCCATTGT CGATTCAGCTCCTGAATAAATTCCATATGTAGTGTCGTATTTTAG AAGCAATGTAAGATTCCGCACTATTCAAACTTTGTAATAAAATCGTCTTAGTAAATAAAAATAAA ] [+] EMBL AW587557 [ ACAATCACTATGTTTTCGCATGGCTAATAAT CCCATGTTTACAGCTATTTGTCAGGACCAGTTCCCACATATCCATTGTCCGATTCAGCTCCTGAATAAATTCCATATGTAGTGTCGTATTTTAG AAGCAATGTAAGATTCCGCACTATTCAAACTTTGTAATAAAATCGTCTTAGTAAATAAAAATA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||