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Schistosoma mansoni
cluster # 9298 cluster # 9298       Sequences # 9       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9298#0 length = 1261 sequences # 9  

consensusID : consensus_9298#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1261
fasta sequence
                              [AGCATACACAAAAAC-AAAAAAAAACACCAAG-AAGGATAAAAAATAAATCTGAGCACGATCAACAAAAGTAAACATAAACGGAACTGAATTTTCTTCTGTCAATCACACAAACTATTCTCCTATAATCCAAGCTGATCACCATTACAATTATCAATCACTGACTATTTAGACAGGAGATAATAATAATAATAACTTTATTTTACCCATAACAAAATCTGAATAAAGATAGGTAAGTCAGAATAGATATTTGTGTCTGTGGTATATGTGCTTTAGAATACACATCCACAAACAATAGCTATTATTATTACTAAGAGTGGGATGCCGAAGCAGATCATGAAACGACTGACGAAACAGGAGATGCAAGTCTATGATATCCTGGTGGGGAATGACCAAGTACAGCA-CCTTCAGTAAGAACTACAGTTGATATATCCGATCCTGGAACATCGTAACGTGGCTGCAAGAGTAGATTTTCCAAGACTGAACGAAGACCTCGAGCTCCTGTATGTTGACTTAATGCTAGTCGAGCAATAGCTTTTAAAGCATCAGGAGTGACTCTCAGTTCACAACCATCAATATTAAAAAGTAATTGATATTGTTTTATCAGTGCATTACGTGGTTCTGTAAGAACACGAACAAGCATTTCTTCATTCAATGAATGTAGAGCAGTAATTATAGGGAAACGACCAACAAATTCCGGTATCATCCCATAAGTAATAAGGTCATTAGCTTCAACTTCTTGTAATAATTTATCAC-GTTCATCGTTTTCTTCATGAGCTGAACTTTCGAAACTTTGAAATAAAT-TTAGAGAATCTGTCGCACTTGGATTTACTGGTGAAGTGCATTTATCTTGTGCAGTCGATTCACTCATAGATGTCAACATATCAAATCCAATAGTCTTTTTATGTTTTCGTCGACTAATTATCTTGTCAAGTCCATTGAATGCACCACAGGCTATAAAAAGTATGTTGGTTGTATCCACGACAAAAGTTTCACCACGTAATTTACGCGGACTTTTGACATCAGGTACGTTAACAACTGAACCTTCTAAAAGTTTTAACATAGCCTGTTGAACACCTTCGCCACTAACATCTCGTGTAGAAAGATGATGCCCAGTTTTAGAGCTTATTTTGTCTATTTCATCTAGAACCACTATACCTTGTTGAGCAAGTTCCACATTGAAATTCGCATTTTGTAATAATCTACCAATGGTTGATTCAACATCTTCACCAACATAACCAGCTTGGGTTATACTTGTACAATC]

[+] EMBL CD197052             [AGCATACACAAAAACAAAAAAAAAACACCAAGAAAGGATAAAAAATAAATCTGAGCACGATCAACAAAAGTAAACATAAACGGAACTGAATTTTCTTCTGTCAATCACACAAACTATTCTCCTATAATCCAAGCTGATCACCATTACAATTATCAATCACTGACTATTTAGACAGGAGATAATAATAATAATAACTTTATTTTACCCATAACAAAATCTGAATAAAGATAGGTAAGTCAGAATAGATATTTGTGTCTGTGGTATATGTGCTTTAAAATACACTTCCACAAACAATAGCTATTATTATTACTAAGAGTGGGATGCCAAAGCAGATCATGAAACGACTGACGAAACAGGAGATGCAAGTCTATGATATCCTGGTGGGGAATGACCAAGTACAGCACCCTTCAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD138709             [  CATACACAAAAAC AAAAAAAAACACCAAG AAGGATAAAAAATAAATCTGAGCACGATCAACAAAAGTAAACATAAACGAAACTGAATTTTCTTCTGTCAATCACACAAACTATTCTCCTATAATCCAAGCTGATCACCATTACAATTATCAATCACTGACTATTTAGACAGGAGATAATAATAATAATAACTTTATTTTACCCATAACAAAATCTGAATAAAGATAGGTAAGTCAGAATAGATATTTGTGTCTGTGGTATATGTGCTTTAGAATACACATTCACAAACAATAGCTATTATTATTACTAAGAGTGGGATGCCGAAGCAGATTATGAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD116094             [     ACACAAAAAC AAAAAAAAACACCAAG AAGGATAAAAAATAAATCTGAGCACGATCAACAAAAGTAAACATAAACGGAACTGAATTTTCTTCTGTCAATCACACAAACTATTCTCCTATAATCCAAGCTGATCACCATTACAATTATCAATCACTGACTATTTAGACAGGAGATAATAATAATAATAACTTTATTTTACCCATAACAAAATCTGAATAAAGATAGGTAAGTCAGAATAGATATTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD128738             [                                                                                                                                                       anctagCACTGACTATTTAGACAGGAGATCATAATAATAATAACTTTATTTTACCCATAACAAAATCTGAATAAAGATAGGTAAGTCAGAATAGATATTTGTGTCTGTGGTATATGTGCTTTAGAATACACATCCACAAACAATAGCTATTATTATTATTAAGAGTGGGATGCCGAAGCAGATCATGAAACGACTGACGAAACAGGAGATGCAAGTCTATGATATTCTGGTGGGGAATGACCAAGTACAGCA CCTTCAGTAAGAACTACAGTTGATATATCCGATCCTGGAACATCGTAACGTGGCTGCAAGAGTAGATTTTCCAAGACTGAACGAAGACCTCGAGCTCCTGTATGTTGACTTAATGCTAGTCGAGCAATAGCTTTTAAAGCATCAGGAGTGACTCTCAGTTCACAACCATCAATATTAAAAAGTAATTGATATTGTTTTATCAGTGCATTACGTGGTTCTGTAAGAACACGAACAAGCATTTCTTCATTCAATGAATGTAGAGCAGTAATTATAGGGAAACGACCAACAAATTCCGGTATCATCCCATAAGTAATAAGGTCATTAGCTTCAACTTCTTGTAATAATTTATCAC GTTCATCGTTTTCTTCATGAGCTGAACTNTCGAAACTTTGAAATAAAT TTAGAGAATCTGTCGCACTTGGATTTACTGGTGAAGTGCATTTATCTTGTGCAGTCGATTCACTCATAGATGTCAACATATCAAATCCAATAGTCTTTTTA                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD160952             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATCCTGGAACATCGTAACGTGGCTGCAAGAGTAGATTTTCCAAGACTGAACGAAGGCCTCGAGCTCCTGTATGTTGACTTAATGCTAGTCGAGCAATAGCTTTTGAAGCATCAGGAGTGACTCTCAGTTCACAACCATCAATATTAAAAAGTAATTGATATTGTTTTATCAGTGCATTACGTGGTTCTGTAAGAACACGAACAAGCATTTCTTCATTCAATGAATGTAGAGCAGTAATTATAGGGAAACGACCAACAAATTCCGGTATCATCCCATAAGTAATAAGGTCATTAGCTTCAACTTCTTGTAATAATTTATCAC GTTCATCATTTTCTTCATGAGCTGAACTTTCGAAACTTTGAAATAAAT TTAGAGAATCTGTCGCACTTGGATTTACTGGTGAAGTGCATTTATCTTGTGCAGTCGATTCACTCATAGATGTCAACATATCAAATCCAATAGTCTTTTTATGTTTTCGTCGACTAATTATCTTGTCAAGT                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD194775             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACAAGCATTTCTTCATTCAATGAATGTAGAGCAGTAATTATAGGGAAACGACCAACAAATTCCGGTATCATCCCATAAGTAATAAGGTCATTAGCTTCAACTTCTTGTAATAATTTATCAC GTTCATCATTTTCTTCATGAGCTGAACTTTCGAAACTTTGAAATAAAT TTAGAGAATCTGTCGCACTTGGATTTACTGGTGAAGTGCATTTATCTTGTGCAGTCGATTCACTCATAGATGTCAACATATCAAATCCAATAGTCTTTTTATGTTTTCGTCGACTAATTATCTTGTCAAGTCCATTGAATGCACCACAGGCTATAAAAAGTATGTTGGTTGTATCCACGACAAAAGCTTCACCACGTAATTTACGCGGACTTTTGACATCAGGTACGTTAACAACTGAACCTTCTAAAAGTTTTAACATAGCCTGTTGAACACCTTCGCCACTAACATCTCGTGTAGAAAGATGATGCCCA                                                                                                                                                     ]
[+] EMBL CD190436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              aATCACGGCGCATCGTTTTCTTCATGAGCTGCACTCTAGAAACTTCGAAATACATCTTAGAGAATCTGTCGCACTTGGATTTACTGGCGAAGTGTTTACATCTTGTGCAGTCGATTCACTCATAGATGTCAACATATCAAATCCAATAGTCTTTTTATGTTTTCGTCGACTAATTATCTTGTCAAGTCCATTGAATGCACCACAGGCTATAAAAAGTATGTTGGTTGTATCCACGACAAAAGTTTCACCACGTAATTTACGCGGACTTTTGACATCAGGTACGTTAACAACTGAACCTTCTAAAAGTTTTAACATAGCCTGTTGAACACCTTCGCCACTAACATCTCGTGTAGAAAGATGATGCCCAGTTTTAGAGCTTATTTTGTCTATTTCATCTAGAACCACTATACCTTGTTGAGCAAGTTCCACATTGAAATT                                                                              ]
[-] EMBL CD190329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATCAC GTTCATCGTTTTCTTCATGAGCTGAACTTTCGAAACTNTGAAATAAAT TTAGAGAATCTGTCGCACTTGGATTTACTGGTGAAGTGCATTTATCTTGTGCAGTCGATTCACTCATAGATGTCAACATATCAAATCCAATAGTCTTTTTATGTTTTCGTCGACTAATTATCTTGTCAAGTCCATTGAATGCACCACAGGCTATAAAAAGTATGTTGGTTGTATCCACGACAAAAGTTTCACCACGTAATTTACGCGGACTTTTGACATCAGGTACGTTAACAACTGAACCTTCTAAAAGTTTTAACATAGCCTGTTGAACACCTTCGCCACTAACATCTCGTGTAGAAAGATGATGCCCAGTTTTAGAGCTTATTTTGTCTATTTCATCTAGAACCACTATACCTTGTTGAGCAAGTTCCACATTGAAATTCGCATTTTGTAATAATCTACCAATGGTTGATTCAACATCTTCACCAACATAACCAGCTTGGGTTATACTTGTACAATC]
[-] EMBL CD196659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            aTTTTCTTCATGAGCTGAACTTTCGAAACTTTGAAATAAAT TTAGAGAATCTGTCGCACTTGGATTTACTGGTGAAGTGCATTTATCTTGTGCAGTCGATTCACTCATAGATGTCAACATATCAAATCCAATAGTCTTTTTATGTTTTCGTCGACTAATTATCTTGTCAAGTCCATTGAATGCACCACAGGCTATAAAAAGTATGTTGGTTGTATCCACGACAAAAGTTTCACCACGTAATTTACGCGGACTTTTGACATCAGGTACGTTAACAACTGAACCTTCTAAAAGTTTTAACATAGCCTGTTGAACACCTTCGCCACTAACATCTCGTGTAGAAAGATGATGCCCAGTTTTAGAGCTTATTTTGTCTATTTCATCTAGAACCACTATACCTTGTTGAGCAAGTTCCACATTGAAATTCGCATTTTGTAATAATCTACCAATGGTTGATTC                                             ]


>consensus_9298#0 AGCATACACAAAAACAAAAAAAAACACCAAGAAGGATAAAAAATAAATCTGAGCACGATC AACAAAAGTAAACATAAACGGAACTGAATTTTCTTCTGTCAATCACACAAACTATTCTCC TATAATCCAAGCTGATCACCATTACAATTATCAATCACTGACTATTTAGACAGGAGATAA TAATAATAATAACTTTATTTTACCCATAACAAAATCTGAATAAAGATAGGTAAGTCAGAA TAGATATTTGTGTCTGTGGTATATGTGCTTTAGAATACACATCCACAAACAATAGCTATT ATTATTACTAAGAGTGGGATGCCGAAGCAGATCATGAAACGACTGACGAAACAGGAGATG CAAGTCTATGATATCCTGGTGGGGAATGACCAAGTACAGCACCTTCAGTAAGAACTACAG TTGATATATCCGATCCTGGAACATCGTAACGTGGCTGCAAGAGTAGATTTTCCAAGACTG AACGAAGACCTCGAGCTCCTGTATGTTGACTTAATGCTAGTCGAGCAATAGCTTTTAAAG CATCAGGAGTGACTCTCAGTTCACAACCATCAATATTAAAAAGTAATTGATATTGTTTTA TCAGTGCATTACGTGGTTCTGTAAGAACACGAACAAGCATTTCTTCATTCAATGAATGTA GAGCAGTAATTATAGGGAAACGACCAACAAATTCCGGTATCATCCCATAAGTAATAAGGT CATTAGCTTCAACTTCTTGTAATAATTTATCACGTTCATCGTTTTCTTCATGAGCTGAAC TTTCGAAACTTTGAAATAAATTTAGAGAATCTGTCGCACTTGGATTTACTGGTGAAGTGC ATTTATCTTGTGCAGTCGATTCACTCATAGATGTCAACATATCAAATCCAATAGTCTTTT TATGTTTTCGTCGACTAATTATCTTGTCAAGTCCATTGAATGCACCACAGGCTATAAAAA GTATGTTGGTTGTATCCACGACAAAAGTTTCACCACGTAATTTACGCGGACTTTTGACAT CAGGTACGTTAACAACTGAACCTTCTAAAAGTTTTAACATAGCCTGTTGAACACCTTCGC CACTAACATCTCGTGTAGAAAGATGATGCCCAGTTTTAGAGCTTATTTTGTCTATTTCAT CTAGAACCACTATACCTTGTTGAGCAAGTTCCACATTGAAATTCGCATTTTGTAATAATC TACCAATGGTTGATTCAACATCTTCACCAACATAACCAGCTTGGGTTATACTTGTACAAT C



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)