These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9310#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 561 fasta sequence [TAAGAAGGA-TTGTCAGATAAACTTCCTAGTCCATCTAAGCAGGTTAGATTCCGCCCAAATGTTATCACAAATTCCTTTGATCATCTAGCTGACAAAATGTCTTTGGATTTTACTGAAACTGGTTTCGATGAATTGACCAATATCACATCATCTTTTGGTAATTCGGACTCCATTTCCATATTGCGAAATCGTTACCCACCAGATAATGCGCCTACACAAAACCAATTTTATTGTAAACAAACACTTTATGATGTATCTGAGGCAATGGAAAACAATGTCAATAAAATGTGTAACCTTTCTGTGGATACTGAATGTCACCTTAAAGGCAGCTGTCAAAGTGTTTCATTCCTCAAAACTACCGATCACCTCCCTCAGCAGCCGTTACCATCCTGTGGTCCTGTATATAGTTCCAAAAACTGTCCTTC-AGATGCGAAGAGTTCAAGTGACCAAGATCCCAGAGAACTACCCACCTATTCTTTTACTCATTCCGAAAGTCTGTCTTTGTCAAGTCTGACAGATTTAAGTTGTCTGGATTCAAATACAACTTCTTTTTGCAATCCA] [-] EMBL CD096610 [TAAGAAGGA TTGTCAGATAANCTTCCTAGTCCATCTAAGCAGGTTAGATTCCGCCCAAATGATATCACAAATTCCTTTGATCATCTAGCTGACANAATGTCTCTGGATTTTACTGAAACTGGTTTCGATGAATTGACCAATATCACATCATCTTTTGATAATTCGGACTCCATTTCCATATTGCGAGATCGCTACCCACCAGATAATGCGCCTACACAAAACCAATTTTATTGTAAACAAACACTTTATGATGTATCTGAGGCAATGGAAAACAATGTCAATAAAATGTGTAACCTTTCTGTGGATACTGAATGTCACCTTAAAGGCAGCTGTCAAAGTGTTTCATTCCTCAAAACTACCGATCACCTCCCTCAGCAGCCGTTACCATCCTGTGGTCCTGTATATAGTTCCAAAAACTGTCCTTC AGATGCGAAGAGTTCAAGTGACCAAGATCCCTGAGAACTACCCACCTATTCTTTTACTCATTCCGAAAGTCTGTCTTTGTCAAGTCTG CAG ] [+] EMBL CD147247 [ AGGATTTGTCAGATAAACTTCCTAGTCCATCTAAGCTGGTTAGATTCCGCCCAAATGTTATCACAAATTCCTTTGATCATCTAGCTGACAAAATGTCTTTGGATTTTACTGAAACTGGTTTCGATGAATTGACCAATATCACATCATCTTTTGGTAATTCGGACTCCATTTCCATATTGCGAAATCGTTACCCACCAGATAATGCGCCTACACAAAACCAATTTTATTGTAAACAAACACTTTATGATGTATCTGAGGCAATGGAAAACAATGTCAATAAAATGTGTAACCTTTCTGTGGATACTGAATGTCACCTTAAAGGCAGCTGTCAAAGTGTTTCATTCCTCAAAACTACCGATCACCTCCCTCAGCAGCCGTTACCATCCTGTGGTCCTGTATATAGTTCCAAAAACTGTCCTTC AGATGCGAAGAGTTCAAGTGACCAAGATCCCAGAGAACTACCCACCTATTCTTTTACTCATTCCGAAAGTCTGTCTTTGTCAAGTCTGACAGATTTAAGTTGTCTGGATTCAAATACAACTTCTTTTTGCAATCCA] [-] EMBL CD096572 [ GGA TTGTCAGATAAACTTCCTAGTCCATCTAAGCAGGTTAGATTCCGCCCAAATGTTATCACAAATTCCTTTGATCATCTAGCTGACAAAATGTCCTTGGATTTTACTGAAACTGGTTTCGATGAATTGACCAATATCACATCATCTTTTGGTAATTCGGACTCCATTTCCATATTGCGAAATCGTTA CCACCAGATAATGCGCCTACACAAAACCAATTTTATTGTAAACAAACACTTTATGATGTATCTGAGGCAATGGAAAACAATGTCAATAAAATGTGTAACCTTTCTGTGGATACTGAATGTCACCTTAAAGGCAGCTGTCAAAGTGTTTCATTCCTCAAAACTACCGATCACCTCCCTCAGCAGCCGTTACCATCCTGTGGTCCTGTATATAGTTCCAAAAACTGTCCTTC AGATGCGAAGAGTTCAAGTGACCAAGATCCCAGAGAACTACCCACCTATTCTTTTACTCATTCCGAAAGTCTGTCTTTGTCAAGTCTGACAGATTTAGGTTGTCTGGATTCAAATACAACTTCTTTTTGCAA ] [-] EMBL CD096563 [ GGATTTGTCAGATAAACTTCCTAGTCCATCTAAGCAGGTTAGATTCCGCCCAAATGTTATCACAAATTCCTTTGATCATCTAGCTGACAAAATGTCTTTGGATTTTACTGAAACTGGTTTCGATGAATTGACCAATATCACATCATCTTTTGGTAATTCGGACTCCATTTCCATATTGCGAAATCGTTACCC ] [-] EMBL CD147173 [ CAGATAAACTTCCTAGTCCATCTAAGCAGGTTAGATTCCGCCCAAATGTTATCACAAATTCCTTTGATCATCTAGCTGACAAAATGTCTTTGGATTTTACTGAAACTGGTTTCGATGAATTGACCAATATCACATCATCTTTTGGTAATTCGGACTCCATTTCCATATTGCGAAATCGTTACCCACCAGATAATGCGCCTACACAAAACCAATTTTATTGTAAACAAACACTTTATGATGTATCTGAGGCAATGGAAAACAATGTCAATAAAATGTGTAACCTTTCTGTGGATACTGAATGTCACCTTAAAGGCAGCTGTCAAAGTGTTTCATTCCTCAAAACTACCGATCACCTCCCTCAGCAGCCGTTACCATCCTGTGGTCCTGTATATAGTTCCAAAAACTGTCCTTC AGATGCGAAGAGTTCAAGTGACCAAGATCCCAGAGAACTACCCACCTATTCTTTTACTCATTCCGAAAGTCTGTCTTTGTCAAGTCTGACAGATTTAAGTTGTCTGGATTCAAATACAACTTCTTTTTGCAA ] [-] EMBL CD147080 [ AAACTTCCTAGTCCATCTAAGCAGGTTAGATTCCGCCCAAATGTTATCACAAATTCCTTTGATCATCTAGCTGACAAAATGTCTTTGGATTTTACTGAAACTGGTCTCGATGAATTGACCAATATCACATCATCTTTTGGTAATTCGGACTCCATTTCCATATTGCGAAATCGTTACCCACCAGATAATGCGCCTACACAAAACCAATTTTATTGTAAACAAACACTTTATGATGTATCTGAGGCAATGGAAAATAATGTCAATACAATGTGTAACCTTTCTGTGGATACTGAATGTCACCTTAAAGGCAGCTGTCAAAGTGTTTCATTCCTCAAAACTACCGATCACCTCCCTCAGCAGCCGTTACCATCCTGTGGTCCTGTATATAGTTCCAAAAACTGTCCTTC AGATGCGAAGAGTTCAAGTGACCAAGATCCCAGAGAACTACCCACCTATTCTTTTACTCATTCCGAAAGTCTGTCTTTGTCAAGTCTGACAGATTTAAGTTGTCTGGATTCAAATACAACTTCTTTTTGCAA ] [-] EMBL CD147073 [ CAGGTTAGATTCCGCCCAAATGTTATCACAAATTCCTTTGATCATCTAGCTGACAAAATGTCCTTGGATTTTACTGAAACTGGTTTCGATGAATTGACCAATATCACATCATCTTTTGGTAATTCGGACTCCATTTCCATATTGCGAAATCGTTACCCACCAGATAATGCGCCTACACAAAACCAATTTTATTGTAAACAAACACTTTATGATGTATCTGAGGCAATGGAAAACAATGTCAATAAAATGTGTAACCTTTCTGTGGATACTGAATGTCACCTTAAAGGCAGCTGTCAAAGTGTTTCATTCCTCAAAACTACCGATCACCTCCCTCAGCAGCCGTTACCATCCTGTGGTCCTGTATATAGTTCCAAAAACTGTCCTTC AGATGCGAAGAGTTCAAGTGACCAAGATCCCAGAGAACTACCCACCTATTCTTTTACTCATTCCGAAAGTCTGTCTTTGTCAAGTCTGACAGATTTAAGTTGTCTGGATTCAAATACAACTTCTTTTTGCAA ] [-] EMBL CD147209 [ GCTGACAAAATGTCTTTGGATTTTACTGAAACTGGTTTCGATGAATTGACCAATATCACATCATCTTTTGGTAATTCGGACTCCATTTCCATATTGCGAAATCGTTACCCACCAGATAATGCGCCTACACAAAACCAATTTTATTGTAAACAAACACTTTATGATGTATCTGAGGCAATGGAAAACAATGTCAATAAAATGTGTAACCTTTCTGTGGATACTGAATGTCACCTTAAAGGCAGCTGTCAAAGTGTTTCATTCCTCAAAACTACCGATCACCTCCCTCAGCAGCCGTTACCATCCTGTGGTCCTGTATATAGTTCCAAAAACTGTCCTTC AGATGCGAAGAGTTCAAGTGACCAAGATCCCAGAGAACTACCCACCTATTCTTTTACTCATTCCGAAAGTCTGTCTTTGTCAAGTCTGACAGATTTAAGTTGTCTGGATTCAAATACAACTTCTTTTTGCAA ] [-] EMBL CD096611 [ ATCGGCCAATATCGCATCATCTTTTGGTAATTCGGACTCCATTTCCATACTGCGAAATCGTTACCCACCAGATAATGCGCGTACACAAAACCAATTTTATTGTAAACAAACACTTTATGATGTATCTGAGGCAATGGAAAACAATGTCAATAAAATGTGTAACCTTTCTGTGGATACTGAATGTCACCTTAAAGGCAGCTGTCAAAGTGTTTCATTCCTCAAAACTACCGATCACCTCCCTCAGCAGCCGTTACCATCCTGTGGTCCTGTATATAGTTCCAAAAACTGTCCTTCAAGATGCGAAGAGTTCAAGTGACCAAGATCCCAGAGAACTACCCACCTATTCTTTTACTCATTCCGAAAGTCTGTCTTTGTCAAGTCNNCCAGATTTAAGTTGTCTGGATTCAAATACAACTTCTTTTTGCAA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||