These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9345#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1188 fasta sequence [TAGACTCAGAAGGAATAGAGCT-GGGGGTAAATTGTTGCTGATGAAAATTGTTTGTGTTAATGGCTGATAAAAACGAATTTTCACTATTTCTAGAAACTTCACTTGTTGAAACCATGTTATCATCTACTGGTGGTATAATATGAAGCATTGAGTCCACATTACTATTTGGACAACTTTCTTCGAATCGACGTTTTCCAGTTATGCTAACTGTAGTCGAACGAGGTGCTGAAGTTGGGACGTTTGAAGAACAAGCTGGATAAGTTGGATGAGAAGAAACCGGAGTTAAGATGTTACTTTGAGGCTGGTTAAGGATATTACCGCGGCGTAGAAATGTGTTTCGCAATAGAGACGTAGCATTCTGATCACAAGATGTGAACAATGATGCGCTGAGACCCACAGTTGTGTCAGATACAGGTGAACAAATTGCAATACTTGAGGGTCCACAAATAGGGACATTTTCTGACTGACCACTTGTTATCAGCATCGGGACTGATGGTGCTGGGGTTGGCATGACAGCAGCTACATTACTTGTGATAGGTCTTATTTCTGCTGTCTGTTTAGGACCAGCAAGTGAATTAGGTGGAGTAATAGCAGGTGTTGGATGGACCGGTTGCACAGTGGCTCCAGCGCGCATAATCCAAGCAGGAATTGATTGAGACACGACAGAACTTGTAGTTTCCGTACTACTACCATCAGTAACGTTCAAACAAGTGGGAGTTTCGAAATGTAACTGATTTCCCGTAATTTGATTTGTTGGGGAAGCACCTAAAGCCAAAGTCCGTGGTACAAACGTATGCGTTATCTGAACACCATCTTGTGATTCGGATTCCTGCAAATTTGATGTTGCAGGAGATGGGGCTCCACTGGTCTGCAAGCTTACTGACACAGTTTGAGGATGTACGCTATTTGATTGAAGCTCAATTAAACGAGCCCGAAGTTCTGTACAATCTTTTTGAGATTTTGTCAGTTGAGATTCTATGAGCTGAGTTCGTAATAAACGTTCTTTTTGAGAATCTGAATGTTGTTGCAAACGATCGATCTCATTGCATAAACCTGACAAAAGACGACGAAATTCATTCACCACTTTTTGACCATTAGACATATTAGAATTTATTTCAATATCTGATCCTTCAACAGATGAATTCATAATTGTTACAACTGATTCTCTAGCCTTCACTTCATCTAAAA] [+] EMBL CD097184 [TAGACTCAGAAGGAATAGAGCTGGGGGGTAAATTGTTGCTGATGAAAATTGTTTGTGTTAATGGCTGATAAAAACGAATTTTCACTATTTCTAGAAACTTCACTTGTTGAAACCATGTTATCATCTACTGGTGGTATAATATGAAGCATTGAGTCCACATTACTATTTGGACAACTTTCTTCGAATCGACGTTTTCCAGTTATGCTAACTGTAGTCGAACGAGGTGCTGAAGTTGGGACGTCTGAAGAACAAGCTGGATAAGTTGGATGAGAAGAAACCGGAGTTAAGATGTTACTTTGAGGCTGGTTAAGGATATTACCGCGGCGTAGAAATGTGTTTCGCAATAGAGACGTAGCATTCTGATCACAAGATGTGAACCATGATGCG ] [+] EMBL CD097168 [TAGACTCAGAAGGAATAGAGCT GGGGGTAAATTGTTGCTGATGAAAATTGTTTGTGTTAATGGCTGATAAAAACGAATTTTCACTATTTCTAGAAACTTCACTTGTTGAAACCATGTTATCATCTACTGGTGGTATAATATGAAGCATTGAGTCCACATTACTATTTGGACAACTTTCTTCGAATCGACGTTTTCCAGTTATGCTAACTGTAGTCGAACGAGGTGCTGAAGTTGGGACGTTTGAAGAACAAGCTGGATAAGTTGGATGAGAAGAAACCGGAGTTAAGATGTTACTTTGAGGCTGGTTAAGGATATTACCGCGGCGTAGAAATGTGTTTCGCAATAGAGACGTAGCATTCTGATCACAAGATGTGAACAATGATGCGCTGAGAC ] [-] EMBL CD097129 [ AGACTCAGAAGGAATAGAGCT GGGGGTAAATTGTTGCTGATGAAAATTGTTTGTGTTAATGGCTGATAAAAACGAATTTTCACTATTTCTAGAAACTTCACCTGTTGAAACCATGTTATCATCTACTGGTGGTATAATATGAAGCATTGAGTCCACATTACTATTTGGACAACTTTCTTCGAATCGACGTTTTCCAGTTATGCTAACTGTAGTCGAACGAGGTGCTGAAGTTGGGACGTTTGAAGAACAAGCTGGATAAGTTGGATGAGAAGAAACCGGAGTTAAGATGTTACTTTGAGGCTGGTTAAGGATATTACCGCGGCGTAGAAATGTGTTTCGCAATAGAGACGTAGCATTCTGATCACAAGATGTGAACAATGATGCGCTGAGACC ] [+] EMBL CD160056 [ TATTACCGCGGCGTAGAAATGTGTTTCGCAATAGAGACGTAGCATTCTGATCACAAGATGTGAACAATGATGCGCTGAGACCCACAGTTGTGTCAGATACAGGTGAACAAATTGCAATACTTGAGGGTCCACAAATAGGGACATTTTCTGACTGACCACTTGTTATCAGCATCGGGACTGATGGTGCTGGGGTTGGCATGACAGCAGCTACATTACTTGTGATAGGTCTTATTTCTGCTGTCTGTTTAGGACCAGCAAGTGAATTAGGTGGAGTAATAGCAGGTGTTGGATGGACCGGTTGCACAGTGGCTCCAGCGCGCATAATCCAAGCAGGAATTGATTGAGACACGACAGAACTTGTAGTTTCCGTACTACTACCATCAGTAACGTTCAAACAAGTGGGAGTTTCGAAATGTTACTGATTTCCCGTAATTTGATT ] [-] EMBL CD179114 [ GGCGTAGAAATGTGTTTCGCAATAGAGACGTAGCATTCTGATCACAAGATGTGAACAATGATGCGCTGAGACCCACAGTTGTGTCAGATACAGGTGAACAAATTGCAATACTTGAGGGTCCACAAATAGGGACATTTTCTGACTGACCACTTGTTATCAGCATCGGGACTGATGGTGCTGGGGTTGGCATGACAGCAGCTACATTACTTGTGATAGGTCTTATTTCTGCTGTCTGTTTAGGACCAGCAAGTGAATTAGGTGGAGTAATAGCAGGTGTTGGATGGACCGGTTGCACAGTGGCTCCAGCGCGCATAATCCAAGCAGGAATTGATTGAGACACGACAGAACTTGTAGTTTCCGTACTACTACCATCAGTAACGTTCAAACAAGTGGGAGTTTCGAAATGTAACTGATTTCCCGTAATTTGATTTGTTGGGGAAGCAC ] [+] EMBL CD127763 [ GCTGTTTGTTTAGGACCAGCAAGTGAATTAGGTGGAGTAATAGCAGGTGTTGGATGGACCGGTTGCACAGTGGCTCCAGCGCGCATAATCCAAGCAGGAATTGATTGAGACACGACAGAACTTGTAGTTTCCGTACTACTACCATCAGTAACGTTCAAACAAGTGGGAGTTTCGAAATGTAACTGATTTCCCGTAATTTGATTTGTTGGGGAAGCACCTAAAGCCAAAGTCCGTGGTACAAACGTATGCGTTATCTGAACACCATCTTGTGATTCGGATTCCTGCAA ] [+] EMBL CD168032 [ TGAGACACGACAGAACTTGTAGTTTCCGTACTACTACCATCAGTAACGTTCAAACAAGTGGGAGTTTCGAAATGTAACTGATTTCCCGTAATTTGATTTGTTGGGGAAGCACCTAAAGCCAAAGTCCGTGGTACAAACGTATGCGTTATCTGAACACCATCTTGTGATTCGGATTCCTGCAAATTTGATGTTGCAGGAGATGGGGCTCCACTGGTCTGCAAGCTTACTGACACAGTTTGAGGATGTACGCTATTTGATTGAAGCTCAATTAAACGAGCCCGAAGTTCTGTACAATCTTTTTGAGATTTTGTCAGTTGAGATTCTATGAGCTGAGTTCGTAATAAACGTTCTTTTTGAGAATCTGAATGTTGTTGCAAACGATCGATCTCATTGCATAAACCTGACAAAAGACGACGAAATTCATTCACCACTTTTTGACCATTAGACATATTAGAATTTATTTCAATATCTGATCCTTCAACAGATGAATTCATAATTGTTACAACTGATTCTCTAGCCTTCACTTCATCTAAAA] [+] EMBL CD168037 [ TGAGACACGACAGAACTTGTAGTTTCCGTACTACTACCATCAGTAACGTTCAAACAAGTGGGAGTTTCGAAATGTAACTGATTTCCCATAATTTGATTTGTTGGGGAAGCACCTAAAGCCAAAGTCCGTGGTACAAACGTATGCGTTATCTGAACACCATCTTGTGATTCGGATTCCTGCAAATTTGATGTTGCAGGAGATGGGGCTCCACTGGTCTGCAAGCTTACTGACACAGTTTGAGGATGTACGCTATTTGATTGAAGCTCAATTAAACGAGCCCGAAGTTCTGTACAATCTTTTTGAGATTTTGTCAGTTGAGATTCTATGAGCTGAGTTCGTAATAAACGTTCTTTTTGAGAATCTGAATGTTGTTGCAAACGATCGATCTCATTACATAAACCTGACAAAAGACGACGAAATTCATTCACCACTTTTTGACTATTAGACATATTAGAATTTATTTCAATATCTGATCCTTCAACAGATGAATTCATAATTGTTATAACTGATTCTCTAGCCTTCACTTCATCTAAAA] [+] EMBL CD092709 [ CTTGTAGTTTCCGTACTACTACCATCAGTAACGTTCAAACAAGTGGGAGTTTCGAAATGTAACTGATTTCCCGTAATTTGATTTGTTGGGGAAGCACCTAAAGCCAAAGTCCGTGGTACAAACGTATGCGTTATCTGAACACCATCTTGTGATTCGGATTCCTGCAAATTTGATGTTGCAGGAGATGG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||