These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9353#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1012 fasta sequence [AATTAGCTAGCAAAATTGTCCCCTTTTTCCAACTTTGTGATGAACAGTTATCTGCACAATCACATTATGATTTTGGTTTAAGAGCTCTGAAATCAGTACTGGCTTCAGCTGGTCATGTAAAACGAGAACGTATTCGGAGATTAAAGGAAGATATATTGTCACGTGGAGAAACGGTCAATGAAACATCAATCGCAGAGTCTTTGCCTGAACAAGAAATACTTATTCAATCAGTAATGGAAACAATGGTACCAAAATTGGTCGCTGAAGATATTCCCTTACTTTATAGCCTACTTAACGATGTCTTCCCTGGAGTTCACTACTCCCAATCCGCTATGGAGAAATTACGCTGTGAATTACGTCGTGTTTGTGAGGAAATGTATCTTGTGTATGATGAATCTGGTCTTGACAATCAGAATGGTAGTGATGGTGTTGTATCATTAGCTGGAGGTAATTCAGGTGCTAGCCTATGGGTACAGAAAGTTTTACAACTTTATCAGATCACATGCATACATCATGGGCTCATGATGGTCGGACCATCAGGTAGTGGAAAATCTACAGCTTGGCGTGTACTACTGAAAGCTTTAGAACGTGTAGAAGGCGTAGAAGGAGTTGCTCATGTAATTGATCCAAAATCAATCAGCAAAGAATCACTTTACGGCTGTCTTGATCCCAATACACGCGAATGGTCGGATGGTCTATTTACTCACATTCTAAGAAAAATTATTGACAGTATTCGTGGCGAGTCCTTCAAAAGACAATGGATTATTTTTGACGGTGATGTCGATCCAGAATGGGTAGAAAATCTCAATTCAGTTCTGGATGACAATAAACTTTTAACACTACCTAATGGTGAACGTCTCAGCATTCCACCAAATGTTCGTATAATGTTTGAAGTGCAAGATTTACGTTATGCAACACTGGCTACCGTTTCGCGTTGCGGAATGGTTTGGTTTAGTGATGATGTCGTCTCTCCTGAGCTCGTTATGCAACATTTCTTGCTTCAGTTACAAAA] [+] EMBL CD192470 [AATTAGCTAGCAAAATTGTCCCCTTTTTCCAACTTTGTGATGAACAGTTATCTGCACAATCACATTATGATTTTGGTTTAAGAGCTCTGAAATCAGTACTGGCTTCAGCTGGTCATGTAAAACGAGAACGTATTCGGAGATTAAAGGAAGATATATTGTCACGTGGAGAAACGGTCAATGAAACATCAATCGCAGAGTCTTTGCCTGAACAAGAAATACTTATTCAATCAGTAATGGAAACAATGGTACCAAAATTGGTCGCTGAAGATATTCCCTTACTTTATAG ] [+] EMBL CD154696 [ GAACGTATTCGGAGACTAAAGGAAGATATATTGTCACGTGGAGAAACGGTCAATGAAACATCAATCGCAGAGTCTTTGCCTGAACAAGAAATACTTATTCAATCAGTAATGGAAACAATGGTACCAAAATTGGTCGCTGAAGATATTCCCTTACTTTATAGCCTACTTAACGATGTCTTCCCTGGAGTTCACTACTCCCAATCCGCTATGGAGAAATTACGCTGTGAATTACGTCGTGTTTGTGAGGAAATGTATCTTGTGTATGATGAATCTGGTCTTGACAATCAGAATGGTAGTGATGGTGTTGTATCATTAGCTGGAGGTAATTCAGGTGCTAGCCTATGGGTACAGAAAGTTTTACAACTTTATCAGATCACATGCATACATCATGGGCTCATGATGGTCGGACCATCAGGTAGTGGAAAATCTACAGCTTGGCGTGTACTACTGAAAGCTTTAGAACGTGTAGAAGGCGTAGAAGGAGTTGCTCATGTAATTGATCCAAAATCAATCAGCANAGAATCACTTTACGGCTGTCTTGATCCC ATACACGCGAATGGTCGGATGGTCTATTTACTCACATTCTAAGAA ] [+] EMBL CD178882 [ TATATTGTCACGTGGAGAAACGGTCAGTGAAACATCAATCGCAGAGTCTTTGCCTGAACAAGAAATACTTATTCAATCAGTAATGGAAACAATGGTACCAAAATTGGTCGCTGAAGATATTCCCTTACTTTATAGCCTACTTAACGATGTCTTCCCTGGAGTTCACTACTCCCAATCCGCTATGGAGAAATTACGCTGTGAATTACGTCGTGTTTGTGAGGAAATGTATCTTGTGTATGATGAATCTGGTCTTGACAATCAGAATGGTAGTGATGGTGTTGTATCATTAGCTGGAGGTAATTCAGGTGCTAGCCTATGGGTACAGAAAGTTTTACAACTTTATCAGATCACATGCATACATCATGGGCTCATGATGGTCGGACCATCAGGTAG ] [-] EMBL CD181916 [ GCTGAAGATATTCCCTTACTTTATAGCCTACTTAACGATGTCTTCCCTGGAGTTCACTACTCCCCATCCGCTATGGAGAAATTACGCTGTGAACTACGTCGTGTTTGTGAGGAAATGTATCTTGTGTATGATGAATCTGGTCTTGACAATCAGAATGGTAGTGATGGTGTTGTATCATTAG ] [+] EMBL CD091617 [ ACGCTGTGAATTACGTCGTGTTTGTGAGGAAATGTATCTTGTGTATGATGAATCTGGTCTTGACAATCAGAATGGTAGTGATGGTGTTGTATCATTAGCTGGAGGTAATTCAGGTGCTAGCCTATGGGTACAGAAAGTTTTACAACTTTATCAGATCACATGCATACATCATGGGCTCATGATGGTCGGACCATCAGGTAGTGGAAAATCTACAGCTTGGCGTGTACTACTGAAAGCTTTAGAACGTGTAGAAGGCGTAGAAGGAGTTGCTCATGTAATTGATCCAAAATCAATCAGCAAAGAATCACTTTACGGCTGTCTTGATCCCAATACACGCGAATGGTCGGATGGTCTATTTACTCACATTCTAAGAAAAATTATTGACAGTATTCGTGGCGAGTCCTTCAAAAGACAATGGATTATTTTTGACGGTGATGTCGATCCAGAATGGGTAGAAAATCTCAATTCAGTTCTGGATGACAATAAACTTTTAACACTACCTAATGGTGAACGTCTCAGCATTCCACCAAATGTTCGTATAATGTTTGAAGTGCCAGATTTA ] [+] EMBL CD091626 [ ACGCTGTGAATTACGTCGTGTTTGTGAGGAAATGTATCTTGTGTATGATGAATCTGGTCTTGACAATCAGAATGGTAGTGATGGTGTTGTATCATTAGCTGGAGGTAATTCAGGTGCTAGCCTATGGGTACAGAAAGTTTTACAACTTTATCAGATCACATGCATACATCATGGGCTCATGATGGTCGGACCATCAGGTAGTGGAAAATCTACAGCTTGGCGTGTACTACTGAAAGCTTTAGAACGTGTAGAAGGCGTAGAAGGAGTTGCTCATGTAATTGATCCAAAATCAAACAGCAAAGAATCACTTTACGGCTGTCTTGATCCCAATACACGCGAATGGTCGGATGGTCTATTTACTCACATTCTAAGAAAAATTATTGACAGTATTCGTGGCGAGTCCTTCAAAAGACAATGGATTATTTTTGACGGTGATGTCGATCCAGAATGGGTAGAAAATCTCAATTCAGTTCTGGATGACAATAAACTTTTAACACTACCTAATGGTGAACGTCTCAGCATTCCACCAA ] [-] EMBL CD178677 [ TGTTGTATCATTAGCTGGAGGTAATTCAGGTGCTAGCCTATGGGTACAGAAAGTTTTACAACTTTATCAGATCACATGCATACATCATGGGCTCATGATGGTCGGACCATCAGGTAGTGGAAAATCTACAGCTTGGCGTGTACTACTGAAAGCTTTAGAACGTGTAGAAGGCGTAGAAGGAGTTGCTCATGTAATTGATCCAAAATCAATCAGCAAAGAATCACTTTACGGCTGTCTTGATCCCAATACACGCGAATGGTCGGATGGTCTATTTACTCACATTCTAAGAAAAATTATTGACAGTATTCGTGGCGAGTCCTTCca ] [-] EMBL CD091631 [ TCACATGCATACATCATGGGCTCATGATGGTCGGACCATCAGGTAGTGGAAAATCTACAGCTTGGCGTGTACTACTGANAGCTTTAGAACGTGTAGAAGGCGTAGAAGGAGTTGCTCATGTAATTGATCCAAAATCAATCAGCAAAGAATCACTTTACGGCTGTCTTGATCCCAATACACGCGAATGGTCGGATGGTCTATTTACTCACATTCTAAGAAAAATTATTGACAGTATTCGTGGCGAGTCCTTCAAAAGACAATGGATTATTTTTGACGGTGATGTCGATCCAGAATGGGTAGAAAATCTCAATTCAGTTCTGGATGACAATAAACTTTTAACACTACCTAATGGTGAACGTCTCAGCATTCCACCAAATGTTCGTATAATGTTTGAAGTGCAAGATTTACGTTATGCAACACTGGCTACCGTTTCGCGTTGCGGAATGGTTTGGTTTAGTGATGATGTCGTCTCTCCTGAGCTCGTTATGCAACATTTCTTGCTTCAGTTACAAAA] [-] EMBL CD091641 [ TAATTGATCCACAATCAATCAGCAAAGAATCACTTTACGGCTGTCTTGATCCCAATACACGCGAATGGTCGGATGGTCTATTTACTTACATTCTAAGAAAAATTATTGACAGTATTCGTGGCGAGTCCTTCAAAAGACAATGGATTATTTTTGACGGTGATGTCGATCCAGAATGGGTAGAAAATCTCAATTCAGTTCTGGATGACAATAAACTTTTAACACTACCTAATGGTGAACGTCTCAGCATTCCACCAAATGTTCGTATAATGTTTGAAGTGCAAGATTTACGTTATGCAACACTGGCTACCGTTTCGCGTTGCGGAATGGTTTGGTTTAGTGATGATGTCGTCTCTCCTGAGCTCGTTATGCAACATTTCTTGCTTCAGTTACAAAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||