These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9392#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1144 fasta sequence [CATCAAACATTTCAGACGCAACATCAGAAAAACCTGGTGCATCAGCGTCCAGAAGTTCAGCCATTGAAGCGGACTCAAAACCCTTTTCGAGGATTTCCGACTCTAGTTCAGAAAATAGAGTTAGAATAAACCTTTCAGAATTCGAAAGACACAAATCATCAGAATGTGCGACAAAACCAACATCAAAAGAATTACTTCCAAAATGTCAAAACGAACAAATTTTGAGCAGCCAAAGTGAGCCAACACATAACGACCAGAATTCAACTCCGGGCAACGCTTTTCGAACTAAAAAGGGAAATTACTTCTCAGCCCGTCCATCCGCTTTCGTCAATCAGACGCGGAAACATCCAATTGTACAATTTGAAGGAAGACGGGATTCAGATGCAAATATGCAGAATTATACTTCAGCCAGTCATCAGGTTGATGACCAAGAAAATGTATTTAGTCATGAACGATACAACAACTTTTCTAAGTCTGGGATTCGTGGTCGTGATAACCGACGTGGTACCGTCTCCAGTCATGAGGTATTTCATAATTCCTCTCGCGATTCCTATAAGGTATCCCAACAAATGTCCAGGGAAAGTGTTATTCGTGGTTATGACTGTAGAGGAGAGGGAGACTCTGTCAGAAGCGACCATTATTCTGACCAACAAAATTCAAATGCTCGGTATTCTGGAGCTTCTCGAAACTCGTATTTGTCAAGCAAAGGTCGAGTAAATTCAGTGAACACTACCAGTTATCGCCGTCCTGGTAATTACGCTTCTCGTGGTCGTGGTTCTGGTTATTAAGTGGTAATTATTTTTGTTTGTACATATAAGGTTTTCTCATTAACTGCGTTTCTTGAAGCACTTTGTGAGAGCTCTCATTAACTGGTTTAAGATATATAATCATAATAATCACACAGTTACCAATGTTTGTGACACGAAATTTACGACTTCTAT-TTTAATATCTTTCATATAACAACCAACATGTTGTAGGTTACCACCAGATCGAAACATTGATGTATTCCAATTATTGATTTACAGAGTATAAAATTTTGAGTTAACTAAAAGTCTTTTGAATAATCTGCCTGCTTCGTTTGTTCTTCTTTATAGTATCTTCACGAATAATTGATTTGTATTGAAATCTTTTGCAGCCTCTCTGC] [+] EMBL CD116182 [CATCAAACATTTCAGACGCAACATCAGAAAAACCTGGTGCATCAGCGTCCAGAAGTTCAGCCATTGAAGCGGACTCAAAACCCTTTTCGAGGATTTCCGACTCTAGTTCAGAAAATAGAGTTAGAATAAACCTTTCAGAATTCGAAAGACACAAATCATCAGAATGTGCGACAAAACCAACATCAAAAGAAT ] [+] EMBL CD080582 [ gaggCAAAACCATTTTCGAGGATTTCCGACTCTAGTTCAGAAAATAGAGTTAGAATAAACCTTTCAGAATTCGAAGGACACAAATCATCAGAATGTGCGACAAAACCAACATCAAAAGAATTACTTCCAAAATGTCAAAACGAACAAATTTTGAGCAGCCAAAGTGAGCCAACACATAACGACCAGAATTCAACTCCGGGCAACGCTTTTCGAACTAAAAAGGGAAATTACTTCTCAGCCCGTCCATCCGCTTTCGTCAATCAGACGCGGAAACATCCAATTGTACAATTTGAAGGAAGACGGGATTCAGATGCAAATATGCAGAATTATACTTCAGCCAGTCATCAGGTTGATGACCAAGAAAATGTATTTAGTCATGAACGATACAACAACTTTTCTAAGTCTGGGATTCGTGGTCGTGATAACCGACGTGGTACCGTCTCCAGTCATGAGGTATTTCATAATTCCTCTCGCGATTCCTATAAGGTATCCCAACAAATGTCCAGGGAAAGTGTTATTCGTGGTTATGACTGTAGAGGAGAGGGAGACTCTGTCAGAAGCGACCATTATTCTGACCAACAAAATTCANATGCTCGGTATTCTGGAGCTTCTCGAAACTCGTATTTGTCAAGC AAGGTCGAGTAAATTCA ] [-] EMBL CD126257 [ CTTTTCGAACTAAAAAGGGAAATTACTTCTCAGCCCGTCCATCCGCTTTCGTCAATCAGACGCGGAAACATCCAATTGTACAATTTGAAGGAAGACGGGATTCAGATGCAAATATGCAGAATTATACTTCAGCCAGTCATCAGGTTGATGACCAAGAAAATGTATTTAGTCATGAACGATACAACAACTTTTCTAAGTCTGGGATTCGTGGTCGTGATAACCGACGTGGTACCGTCTCCAGTCATGAGGTATTTCATAATTCCTCTCGCGATTCCTATAAGGTATCCCAACAAATGTCCAGGGAAAGTGTTATTCGTGGTTATGACTGTAGAGGAGAGGGAGACTCTGTCAGAAGCGACCATTATTCTGACCAACAAAATTCAAATGCTCGGTATTCTGGAGCTTCTCGAAACTCGTATTTGTCAAGCAAAGGTCGAGTAAATTCAGTGAGCACTACCAGTTATCGCCGTCCTGGTAATTACGCTTCTCGTGGTCGTGGTTCTGGTTATTAAGTGGTAA TATTTTTGTTTGTACATATAAG ] [-] EMBL CD126233 [ GCTTTCGTCAATCAGACGCGGAAACATCCAATTGTACAATTTGAAGGAAGACGGGATTCAGATGCAAATATGCAGAATTATACTTCAGCCAGTCATCAGGTTGATGACCAAGAAAATGTATTTAGTCATGAACGATACAACCACTTTTCTAAGTCTGGGATTCGTGGTCGTGATAACCGACGTGGTACCGTCTCCAGTCATGAGGTATTTCATAATTCCTCTCGCGATTCCTATAAGGTATCCCAACAAATGTCCAGGGAAAGTGTTATTCGTGGTTATGACTGTAGAGGAGAGGGAGACTCTGTCAGAAGCGACCATTATTCTGACCAACAAAATTCAAATGCTCGGTATTCTGGAGCTTCTCGAAACTCGTATATGTCAAGCAAAGGTCGAGTAAATTCAGTGAACACTACCAG TATCGCCGTCCTGGTAATTACGCTTCTCGTGGTCGTGGTTCTGGTTA TAAGTGGTAA TATTCTTG TG ACATATAA ] [+] EMBL CD118989 [ ATATGCAGAATTATACTTCAGCCAGTCATCAGGTTGATGACCAAGAAAATGTATTTAGTCATGAACGATACAACAACTTTTCTAAGTCTGGGATTCGTGGTCGTGATAACCGACGTGGTACCGTCTCCAGTCATGAGGTATTTCATAATTCCTCTCGCGATTCCTATAAGGTATCCCAACAAATGTCCAGGGAAAGTGTTATTCGTGGTTATGACTGTAGAGGAGAGGGAGACTCTGTCAGAAGCGACCATTATTCTGACCAACAAAATTCAAATGCTCGGTATTCTGGAGCTTCTCGAAACTCGTATTTGTCAAGCAAAGGTCGAGTAAATTCAGTGAACACTACCAGTTATCGCCGTCCTGGTAATTACGCTTCTCGTGGTCGTGGTTCTGGTTATTAAGTGGTAATTATTTTTGTTTGTACATATCAGGTTTTCTCATTAACTGCGTTT ] [-] EMBL CD118991 [ TAACCGACGTGGTACCGTCTCCAGTCATGAGGTATTTCATAATTCCTCTCGCGATTCCTATAAGGTATCCCAACAAATGTCCAGGGAAAGTGTTATTCGTGGTTATGACTGTAGAGGAGAGGGAGACTCTGTCAGAAGCGACCATTATTCTGACCAACAAAATTCAAATGCTCGGTATTCTGGAGCTTCTCGAAACTCGTATTTGTCAAGCAAAGGTCGAGTAAATTCAGTGAACACTACCAGTTATCGCCGTCCTGGTAATTACGCTTCTCGTGGTCGTGGTTCTGGTTATTAAGTGGTAATTATTTTTGTTTGTACATATAAGGTTTTCTCATTAACTGCGTTTCTTGAAGCACTTTGTGAGAGCTCTCATTAACTGGTTTAAGATATATAATCATAATAATCACACAGTTACCAATGTTTGTGACACGAAATTTACGACTTCTAT TTTAATATCTTTCATATAACAACCAACATGTTGTAGGTTACCACCAGAT ] [-] EMBL CD089761 [ CCAGTCATGAGGTATTTCATAATTCCTCTCGCGATTCCTATAAGGTATCCCAACAAATGTCCAGGGAAAGTGTTATTCGTGGTTATGACTGTAGAGGAGAGGGAGACTCTGTCAGAAGCGACCATTATTCTGACCAACAAAATTCAAATGCTCGGTATTCTGGAGCTTCTCGAAACTCGTATTTGTCAAGCAAAGGTCGAGTAAATTCAGTGAACACTACCAGTAATCGCCGTCCTGGTAATTACGCTTCTCGTGGTCGTGGTTCTGGTTATTAAGTGGTAATTATTTTTGTTTGTACATATAAGGTTTTCTCATCAACTGCGTTTCTTGAAGCACTTTGTGAGAGCTCTCATTAACTGGTTTAAGATATATAATCATAATAATCACACAGTTACCAATGTTTGTGACACGAAATTTACGACTTCTATATTTAATATCTTTCATATAACAACCAACATGTTGTAGGTTACCACCAGATCGAAACATTGATGTc ] [+] EMBL CD169516 [ TGTCAGAAGCGACCATTATTCTGACCAACAAAATTCAAATGCTCGGTATTCTGGAGCTTCTCGAAACTCGTATTTGTCAAGCAAAGGTCGAGTAAATTCAGTGAACACTACCAGTTATCGCCGTCCTGGTAATTACGCTTCTCGTGGTCGTGGTTCTGGTTATTAAGTGGTAATTATTTTTGTTTGTACATATAAGGTTTTCTCATTAACTGCGTTTCTTGAAGCACTTTGTGAGAGCTCTCACCAACTGGTTTAAGATATATAATCATAATAATCACACAGTTACCAATGTTTGTGACACGAAATTTACGACTTCTAT TTTAATATCTTTCATATAACAACCAACATGTTGTAGGTTACCACCAGATCGAAACATTGATGTATTCCAATTATTGATTTACAGAGTATAAAATTTTGAGTTAACTAAAAGTCTTTTGAATAATCTGCCTGCTTCGTTTGTTCTTCTTTATAGTATCTTCACGAATAATTGAT ] [-] EMBL CD141597 [ GTGGTAATTATTTTTGTTTGTACATATAAGGTTTTCTCATTAACTGCGTTTCTTGAAGCACTTTGTGAGAGCTCTCACCAACTGGTTTAAGATATATAATCATAATAATCACACAGTTACCAATGTTTGTGACACGAAATTTACGACTTCTAT TTTAATATCTTTCATATAACAACCAACATGTTGTAGGTTACCACCAGATCGAAACATTGATGTATTCCAATTATTGATTTACAGAGTATAAAATTTTGAGTTAACTAAAAGTCTTTTGAATAATCTGCCTGCTTCGTTTGTTCTTCTTTATAGTATCTTCACGAATAATTGCATTGTATTGAAATCTTTTGCAGCCTCTCTGC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||