These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9394#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1514 fasta sequence [CTGGTATACCCTTACGACGAACTTTTTCACGTGATAGTAGGCATTACTGTTTGTGAGTCCTTTTTCTTTTCAACAGGTCGTAAATCATATCCTTCGGTTGCAGAAGCATCATTAGGAGTATGAGAGGCTAGATCAAGGATTTCTTCTTCTTCCTCTTCCGCTTCATTTTGATTGGATGATTCTCCGTCCATATCAACTTTATCAGTAGATGACAATCCTAAAAGTGCTAAACGGACTTCAGCTGGTGGAAGTTTTTTAGGTCTGTGACGATGAATTCGAGGGACAGTGGGGGCAGGTGGTTCTGATTCAGGATCTGAGCTAGCCGCTGTACTAGCCCCACTTGAAGAAAGAGCAAGATATTTGGAAAGTTCATCTCTATTCTCTGTTAAAGTAGTTTTAGGATCAACATCTGAACGGAATTGATCACGTAGCCAGTTTGTTCGATCAGCCGGTGTTTTATCCCAAGTTATACCAATTCGTGTTGAGTGTAAGGCACTTGTTTCAAAGCGAATTGGGGCGTATTTTGTTTTATTGATTTCCCGACATTCACTTACAAGATGAGCATATTCTGGAGGAACTTCAAATTGTTGATCATTATCAACAAAACGTAAATCTAACCGGGAACCGGAACTTTCATATTCAAGACCATCACAAGCCGTATAAATTGCTTCCGCTGTTTCAACACTATCGAATTCAATAATAGCATAGAAATATTTCAGTCGTGCCAACTGATATTCACGAATGCGACGTCGGAGTTTAGATGATGCATTACGCCA-G-CAGATTTTTCATCAACATCTATAGCCATAG-TGAATTCTCTACAGTCAGA-TGTTGTCTTCACTGCATTGTGTATCTGATTCACTTGGACGTAGTTCAATTGGTCCATGAAGAGCTTCATCAGCCATGCGTTTAATGCCAAACTCGGATGGATAGACTGTAACTTTTTCTATATGCCCTCTGGCAGGTAAAAATGATTCTAAGACCATATAAATGGTTTCTGGTTTTGCATTATCCCAATCGAAATGGAGCAGTGCCAATCTATGACTTGTCTGGGTAGCAGGAACGGAATCTTTAGTTAATTCATACCAATCTGCACCTTGTAAGTCTTCAATAGCCTCAAAAACATTAATTTTTTCTTCGTCGTTAGTCGAAGCGCTTGATTCAGTTTCTGAGGCTTCGAGTTCAGAACTTTCATTGCTACTGGAGTCCGATTGTTTTTCTGAACTATCCTTTCGAGTTTTAGATGCTAATTTCTGTTTCACGTATGCTCGTGGATTTTTGAACCAAGGGCGTCCGCGTTTATCTTTGAATGCTGATTCTGGTCCAACATCATCAAAAAGGTCTTTAACAGTCCTCGTCTTTTTAGCACCTTTACGTTTGCCAGGAGCAAGTAGAGGGTCATGAGATATTTCTTCCAAATTTTTATTATTCATTGATTATTCACCATAAAGACTCCAATCCCACCACTTGCTTGGTTGAATCCCTCGTAGCGGTTTATGTCACAGGTTCAAATTACG] [+] EMBL CD062429 [CTGGTATACCCTTACGACGAACTTTTTCACGTGATAGTAGGCATTACTGTTTGTGAGTCCTTTTTCTTTTCAACAGGTCGTAAATCATATCCTTCGGTTGCAGAAGCATCATTAGGAGTATGAGAGGCTAGATCAAGGATTTCTTCTTCTTCCTCTTCCGCTTCATTTTGATTGGATGATTCTCCGTCCATATCAACTTTATCAGTAGATGACAATCCTAAAAGTGCTAAACGGACTTCAGCTGGTGGAAGTTTTTTAGGTCTGTGACGATGAATTCGAGGGACAGTGGGGGCAGGTGGTTCTGATTCAGGATCTGAGCTAGCCGCTGTACTAGCCCCACTTGAAGAAAGAGCAAGATATTTGGAAAGTTCATCTCTATTCTCTGTTAAAGTAGTTTTAGGATCAACATCTGAACGGAATTGATCACGTAGCCAGTTTGTTCGATCAGCCGGTGTTTTATCCC ] [+] EMBL CD158609 [ ATTTCTTCTTCTTCCTCTTCCGCTTCATTTTGATTGGATGATTCTCCATCCATATCAACTTTATCAGTAGATGACAATCCTAAAAGTGCTAAACGGACTTCAGCTGGTGGAAGTTTTTTAGGTCTGTGACGATGAATTCGAGGGACAGTGGGGGCAGGTGGTTCTGATTCAGGATCTGAGCTAGCCGCTGTACTAGCCCCACTTGAAGAAAGAGCAAGATATTTGGAAAGTTCATCTCTATTCTCTGTTAAAGTAGTTTTAGGATCAACATCTGAACGGAATTGATCACGTAGCCAGTTTGTTCGATCAGCCGGTGTTTTATCCCAAGTTATACCAATTCGTGTTGAGTGTAAGGCACTTGTTCCAAAGCGAATTGGGGCGTATTTTGTTTTATTGATTTCCCGACATTCACTTACAAGATGAGCATATTCTGGAGGAACTTCAAATTGTCGATCATTATCAACAAAACGTAAATCTAACCGGGAACCGGAACTTT ] [-] EMBL CD152990 [ AAAGAGCAAGATATGGGGAAAGTTCATCTCTATTCTCTGTTAAAGTAGTTGTAGGATCAACATCTGAACGGAATTGATCACGTAGCCAGTTTGTTCGATCAGCCGGTGTTTTATCCCAAGTTATACCAATTCGTGTTGAGTGTAAGGCACTTGTTTCAAAGCGAATTGGGGCGTATTTTGTTTTATTGATTTCCCGACATTCACTTACAAGATGAGCATATTCTGGAGGAACTTCAAATTGTTGATTATTATCAACAAAACGTAAATCTAACCGGGAACCGGAACTTTCATATTCAAGACCATCACAAGCCGTATAAATTGCTTCCGCTGTTTCAACACTATCGAATTCAATAATAGCATAGAAATATTTCAGTCGTGCCAACTGATATTCACGAATGCGACGTCGGAGTTTAGATGATGCATTACGCCA GCCAGATTTTTCATCAAC ] [-] EMBL CD110744 [ TTATCCCAAGTTACACCAATTCGTGTTGAGTGTAAGGCACTTGTTTCAAAGCGAATTGGGGCGTATTTTGTTTTATTGATTTCCCGACATTCACTTACAAGATGAGCATATTCTGGAGGAACTTCAAATTGTTGATCATTATCAACAAAACGTAAATCTAACCGGGAACCGGAACTTACATATTCAAGACCATCACAAGCCGTATAAATTGCTTCCGCTGTTTCAACACTATCGAATTCAATAATAGCATAGAAATATT ] [-] EMBL CD153257 [ AATTCGTGTTGAGTGTAAGGCGCTTGTTTCAAAGCGAATTGGGGCGTATTGTGTTTTATTGATTTGCAGTCACTCGCTTACAAGATGAGCATATTCTGGAGGAACTTCAAATTGTTGATCATTATCAACAAAACGTAAATATAATCGGGAACCGGAACTTTCATATTCAAGACCATCGCAAACCGTATAAACTGATAGCGCTGTGTCACCACTATCGAATTCAATAATAGCATAGAAATATGTCAGTCGTGGTAACTGATATTCACGAATGCGACGTCGGAGTTTAGATGATGCATTACGCCAGG CAGATTTTTCATCAAC ] [-] EMBL CD114109 [ TTCGCGAATGCGACGTCGGAGTTTAGATGATGCATTACGCCA GCCAGATTTTTCATCGACATCTATAGCCATAGTTGAATTCTCTACAGTCAGATTGTTGTCTTCACTGCATTGTGTATCTGATTCACTTGGACGTAGTTCAATTGGTCCATGAAGAGCTTCATCAGCCATGCGTTTAATGCCAAACTCGGATGGATAGACTGTAACTTTTTCTATATGCCCTCTGGCAGG ] [-] EMBL CD165109 [ ctAATGCGACGTCGGAGTTTAGATGATGCATTACGTCA G CAGATTTTTCATCAACATCTATAGCCATAG TGAATTCTCTACAGTCAGA TGTCGTTTTCATNGCATTCTGTATCTGATTCACTTGGACGTAGTTCAATTGGTCCATGAAGAGCTTCATCAGCCATGCGTTTAATGCCAAACTCGGATGGATAGATTGTAACTTTTTCAATATGCCCTCTGGCTGGTAAAAATGATTCTAAGACCATATAAATGGTTTCTGGTTTTGCATTATCCCAATCGAAATGGAGCAGTGCCAATCTATGACTTGTCTGGGTAGCAGGAACGGAATCTTTAGTTAATTCATACCAATCTGCACCTTGTAAGTCTTCAATAGCCTCAAAAACATTAATTTTT ] [+] EMBL CD160941 [ ATTCTAAGACCATATAAATGGTTTCTGGTTTTGCATTATCCCAATCGAAATGGAGCAGTGCCAATCTATGACTTGTCTGGGTAGCAGGAACGGAATCTTTAGTTAATTCATACCAATCTGCACCTTGTAGGTCTTCAATAGCCACAAAAACATTAATTTTTTCTTCGTCGTTAGTCGAAGCGCTTGATTCAGTTTCTGAGGCTTCGAGTTCAGAACTTTCATTGCTACTGGAGTCCGATTGTTTTTCTGAACTATCCTTTCGAGTTTTAGATGCTAATTTCTGTTTCACGTATGCTCGTGGATTTTTGAACCAAGGGCGTCCGCGTTTATCTTTGAATGCTGATTCTGGTCCAACATCATCAAAAAGGTCTTTAACAGTCCTCGTCTTTTTAGCACCTTTACGTTTGCCAGGAGCAAGTAGAGGGTCATGAGATATTTCTTCCAAATTTTTATTATTCATTGATTATTCACCATAAAGACTCCAATCCCACCACTTGCTTGGTTGAATCCCTCGTAGCGGTTTATGTCACAGGTTCAAATTAC ] [-] EMBL CD161017 [ TTCTAAGACCATATAAATGGTTTCTGGTTNTGCATTATCCCAATCGAAATGGAGCAGTGCCAATCTATGACTTGTCTGGGTAGCAGGAACGGAATCTTTAGTTAATTCATACCAATCTGCACCTTGTAAGTCTTCAATAGCTTCAAAAACATTAATTTTTTCTTCGTCGTTAGTCGAAGCGCTTGATTCAGTTTCTGAGGCTTCGAGTTCAGAACTTTCATTGCTACTGGAGTCCGATTGTTTTTCTGAACTATCCTTTCGAGTTTTAGATGCTAATTTCTGTTTCACGTATGCTCGTGGATTTTTGAACCAAGGGCGTCCGCGTTTATCTTTGAATGCTGATTCTGGTCCAACATCATCAAAAAGGTCTTTAACAGTCCTCGTCTTTTTAGCGCCTTTACGTTTGCCAGGAGCAAGTAGAGGGTCATGAGATATTTCTTCCAAATTTTTATTATTCATTGATTATTCACCATAAAGACTCCAATCCCACCACTTGCTTGGTTGAATCCCTCGTAGCGGTTTATGTCACAGGTTCAAATTACG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||