These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9396#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1255 fasta sequence [GTCGATTTTTCAATGAAAAATGAGAGGAAGTTAAAAGATAAAAGCGACAAGGCAACGACTGATCATGCTCTCGACAGAAGATCGTGCTCCATACTATTCAAAATGATGAATCAGGAAATATTTAGTGAAGTCAATGGGTGTATTAGTACAGGGAAAGAAGCGAACATATATCATGTAAAAAATAAAGATAATGTGGATTTCGCTATCAAAGTTTATATGACATCAATAATGCCATTTAAATCTCGCGATAAATACGTAAAGGGTGATTTTAGAATGCGTCATGGTTACTCAAAGTCAACATCTTGGAAGCTTGTATGCAAATGGAGTGAAAAAGAATATCGTAATTTACTCCGAATAAATCAATCGGGTTTAATAAGTGCCCCCAAACCTCTACGTTTGAAAGGCGTTGTCCTATTGATGACGTTTGTCGGAAAGGATGGTATTCCCGCCCCAAAGTTGAAGGATGTTTGTTTTCAAGAAAGCGATTGCAAAGATACCCCCGATTGGGCTTCTTTGTATTTTCAAGTTATTCATGATATACGAACATTGTTTCAAAAGTGCCGCTTAGTCCACGCCGATTTAAGCGAATATAACTTACTATATCTTGATGGAAAAGTCTGGATGATTGATGTTTCCCAGGCTGTGGAACATGAATCGCCTCAAGCTCTTGAATATTTAAGAACTGATTGTCACAATATAAATATATTTTTCCGCAAACAAGGTGTTTCAACCTTAACATTACGAGAACTTTTTGAATGGGTAGTGAATCCTACATTGCCTGCACCTGATGATGCATCATCTAAAGAGTGTTTAATGTCTTTACTTCGAGAAGCTTCAATTCGTGGATTAAATGAAACCATTGAAAAAGAAGATGAAGCCTTCCGATACGTACATATTCCTCGAAATTTATCAGTATCATATCCATTTGTGAGAGATTTTCTTAAAATACAACGTGGACAATTGTCACATTCTGATATTTACTACGCAGCTATAACTGGACTGAAACCAGACTTAACAGGCACTATAATACAACCTCAAATAATGAAAGAAAACAATGAATGTGAATCGGATAATGAATCAATTACAGACAAAGCTTCAGAAAGTTCTTCTCAGTCTATTAGAAAAGATGTAACTCAAACAAAGAATAATGCACGACCGCGAAATGAATCTCCAGAAAGTCGTAGGAATAGAAAAAAAGCAATCAAGCAAGAACAAGCTGAAAAGCGAAAACATAAAATTCCTAAATATGTTAAAA] [+] EMBL CD161180 [GTCGATTTTTCAATGAAAAATGAGAGGAAGTTAAAAGATAAAAGCGACAAGGCAACGACTGATCATGCTCTCGACAGAAGATCGTGCTCCATACTATTCAAAATGATGAATCAGGAAATATTTAGTGAAGTCAATGGGTGTATTAGTACAGGGAAAGAAGCGAACATATATCATGTAAAAAATGAAGATAATGTGGATTTCGCTATCAAAGTTTATATGACATCGATAATGCCATTTAAATCTCGCGATAAATACGTAAAGGGTGATTTTAGAATGCGTCATGGTTACTCAAAGTCAACATCTTGGAAGCTTATATGCAAATGGAGTGAAAAAGAATATCGTAATTTACTCCGAATAAATCAATCGGGTTTAATAAGTGCCCCCAAACCTCTACGTTTGAAAGGCGTTGTCCTATTGATGACGTTTGTCGGAAAGGATGGTATTCCCGCCCCAAAGTTGAAGGATGTTTGTTTTCAAGAAAGCGATTGCAAAGATACCCCCGATTGGGCTTCTTTATATTTTCAAGTTATTCATGATATACGAACATTGTTTCAAAAGTGCCGCTTAGTCCACGCCGATTTAAGCGAATATAACTTACT ] [+] EMBL CD162293 [ ctttgcTGATGAATCAGGAAATATTTAGTGAAGTCAATGGGTGTATTAGTACAGGGAAAGAAGCGAATATATATCATGTAAAGAATAAAGATAATGTGGATTTCGCTATCAAA ] [+] EMBL CD162318 [ AGGAAATATTTAGTGAAGTCAATGGGTGTATTAGTACAGGGAAAGAAGCGAACATATATCATGTAAAAAATAAAGATAATGTGGATTTCGCTATCAAAGTTTATATGACATCAATAATGCCATTTAAATCTCGCGATAAATACGTAAAGGGTGATTTTAGAATGCGTCATGGTTACTCAAAGTCAACATCTTGGAAGCTTGTATGCAAATGGAGTGAAAAAGAATATCGCAATTTACTCCGAATAAATCAATCGGGATTAATAAGTGCCCCCAAACCTCTACGTCTGAAAGGCGTTGACCTATTGATGACGTTTGTCCGAAACGATGGAAGTTCCGCCCCTAAACTGAAAGATGTTTGTTTTCA ] [+] EMBL CD162159 [ AGGAAATATTTATTGAAGTCAATGGGTGTATTACTACACGGAAAGAAGCGAACATATATCATGTTAAAAATAAAGATAATGTGGATTTCGCTATCAAAGTTTATATGACATCAATAATGCCATTTAAATCTCGCGATAAATACGTAAAGGGTGATTTTAGAATGCGTCATGGTTACTCAAAGTCAACATCTTGGAAGCTTGTATGCAAATGGAGTGAAAAAGAATAT ] [-] EMBL CD095378 [ GACG TTGTCGGAAAGGATGGTATTCCCGCCCCAAAGTTGAAGGATGTTTGTTTTCAAGAAAGCGATTGCAAAGATACCCCCGATTGGGCTTCTTTGTATTTTCAAGTTATTCATGATATACGAACATTGTTTCAAAAGTGCCGCTTAGTCCACGCCGATTTAAGCGAATATAACTTACTATATCTTGATGGAAAAGTCTGGATGATTGATGTTTCCCAGGCTGTGGAACATGAATCGCCTCAAGCTCTTGAATATTTAAGAACTGATTGTCACAATATAAATATATTTTTCCGCAAACAAGGTGTTTCAACCTTAACATTACAAGAACTTTTTGAATGGGTAGTGAATCCTACATTGCCTGCACCTGATGATGCATCATCTAAAGAGTGTTTAATGTCTTTACTTCGAGAAGCTTCAATTCGTGGATTAAATGAAACCATTGAAAAAGAAGATGAAGCCTTCCGATACGTACATATTCCTCGAAATTTATCAGTATCATATCCATTTGTGAGAGATTTTCTTAAAATACAACGTGGACAATTGTCACATTCTGA ] [+] EMBL CD095142 [ CGGAAAGGATGGTATTCCCGCCCCAAAGTTGAAGGATGTTTGTTTTCAAGAAAGCGATTGCAAAGATACCCCCGATTGGGCTTCTTTGTATTTTCAAGTTATTCACGATATACGAACATTGTTTCAAAAGTGCCGCTTAGTCCACGCCGATTTAAGCGAATATAACTTACTATATCTTGATGGAAAAGTCTGGATGATTGATGTTTCCCAGGCTGTGGAACATGAATCGCCTCAAGCTCTTGAATATTTAAGAACTGATTGTCACAATATAAATATATTTTTCCGCAAACAAGGTGTTTCAACCTTAACATTACGAGAACTTTTTGAATGGGTAGTGAATCCTACATTGCCTGCACCTGATGATGCATCATCTAAAGAGTGTTTAATGTCTTTACTTCGAGAAGCTTCAATTCGTGGATTAAATGAAACCATTGAAAAAGAAGATGAAGCCTTCCGATACGTACATATTCCTCGAAATTTATCAGTATCATATCCATTTGTGAGAGATTTTCTTAAAATACAACGTGGACAATTGTCACATTCT ] [-] EMBL CD094707 [ GGATGTTTGTTTTCAAGAAAGCGATTGCAAAGATACCCCCGATTGGGCTTCTTTGTATTTTCAAGTTATTCATGATATACGAACATTGTTTCAAAAGTGCCGCTTAGTCCACGCCGATTTAAGCGAATATAACTTACTATATCTTGATGGAAAAGTCTGGATGATTGATGTTTCCCAGGCTGTGGAACATGAATCGCCTCAAGCTCTTGAATATTTAAGAACTGATTGTCACAATATAAATATATTTTTCCGCAAACAAGGTGTTTCAACCTTAACATTACGAGAACTTTTTGAATGGGTAGTGAATCCTACATTGCCTGCACCTGATGATGCATCATCTAAAGAGTGTTTAATGTCTTTACTTCGAGAAGCTTCAATTCGTGGATTAAATGAAACCATTGAAAAAGAAGATGAAGCCTTCCGATACGTACATATTCCTCGAAATTTATCAGTATCATATCCATTTGTGAGAGATTTTCTTAAAATACAACGTGGACAATTGTCGCATTCTGA ] [-] EMBL CD095152 [ ATTTTCAAGTTATTCATGATATACGAACATTGTTTCAAAAGTGCCGCTTAGTCCACGCCGATTTAAGCGAATATAACTTACTATATCTTGATGGAAAAGTCTGGATGATTGATGTTTCCCAGGCTGTGGAACATGAATCGCCTCAAGCTCTTGAATATTTAAGAACTGATTGTCACAATATAAATATATTTTTCCGCAAACAAGGTGTTTCAACCTTAACATTACGAGAACTTTTTGAATGGGTAGTGAATCCTACATTGCCTGCACCTGATGATGCATCATCTAAAGGGTGTTTAATGTCTTTACTTCGAGAAGCTTCAATTCGTGGATTAAATGAAACCATTGAAAAAGAAGATGAAGCCTTCCGATACGTACATATTCCTCGAAATTTATCAGTATCATATCCATTTGTGAGAGATTTTCTTAAAATACAACGTGGACAATTGTCACATTCTGA ] [+] EMBL AI976761 [ ATCCTACATTGCCTGCACCTGATGATGCATCATCTAAAGAGTGTTTAATGTCTTTACTTCGAGAAGCTTCAATTCGTGGATTAAATGAAACCATTGAAAAAGAAGATGAAGCCTTCCGATACGTACATATTCCTCGAAATTTATCAGTATCATATCCATTTGTGAGAGATTTTCTTAAAATACAACGTGGACAATTGTCACATTCTGATATTTACTACGCAGCTATAACTGGACTGAAACCAGACTTAACAGGCACTATAATACAACCTCAAATAATGAAAGAAAACAATGAATGTGAATCGGATAATGAATCAATTACAGACAAAGCTTCAGAAAGTTCTTCTCAGTCTATTAGAAAAGATGTAACTCAAACAAAGAATAATGCACGACCGCGAAATGAATCTCCAGAAAGTCGTAGGAATAGAAAAAAAGCAATCAAGCAAGAACAAGCTGAAAAGCGAAAACATAAAATTCCTAAATATGTTAAAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||