These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9409#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1469 fasta sequence [TAAGATATTGAAAACTGCTGGATTACATGATACACTNTCAGATGGCAATGTTGCTGGTGTTTTTCCAAGACTCACAACATGACGCAGACAAGAAATAACACATTTAAAGACAACAGGTTTTAGTTCAGTATGTGATCGAAGAAGTTCTTGTATGGCATTACTCATTTGACTCGCTGTTAAACTATTAGATAAATTTTGACCAGAATTACAATTCATATCATATGATATCTGTGATATAAACTCACGAACACGTTTAGTTTTCATTGTCGTAAGATAATCTGGTGAAACTAATGTATTCAAATAACGATTAATCACACCACTTGATAAAATAGCTTCAATACCACGGGAATTCAAAGCTAAAGTATTCAATAATGCTGGTAACTGTACAAGAAAATCTCGATTTTGAGGTAACGGTTGTTCCGTTAAGGCTTTTAAAATATCACTTGTAATATTCTTGTCCTGCATAGTTGAAATTCTAGATGGATATGTATAAAGGTAGTTGGTAATAGTTTCCA-TAGCGAAAAGTGACAAATGTGGAGTGAAATGGGTGGAACCATTGAGGAAAATTTGACGCAGGACTGAGGGTAGGTTGCCATCCATTACAGAGTGAACTATATCGCCCCATTCCGCGTCCAAACAAAGTCGCTTCAGTAAATTGAGTATAGATTTCATAAGGCCAGAGCGCTGTGTATTCAAAGTCTGTTCATAATCAGAAACGCTCGATTTATTACTTGATGTAGAACTCTGAAGAACAACTTCAACTTCGTAATTTAATCGATCGACCAAAATACTTACTACATGTTGACGACTTGAAGAAATACTCAACAGGATTTGATCAGTCACACGAACAGCACGTGTGACATAACTCAAATAATCATTGTGCGGTGTATGCCAAGAAATAAGTTGAGTCATCGTGTCC---AAAATACCACTAGAGCTGAGAGTTGTGTTTTGTATATTTC------CTGGACCAACGTTTTCTTCATAACAAGCTAGATGATACAAGAAGGATAATAGAGCTGTTGTGAAATGCTGATTTGT-CTCCCAGCAGAGGCTTTTATAGAACCGTCTACAAGTCCTTTGATCCATTTTCTGGTCAAATTAGGTAAGATACCGTGATAACTGGATAATCCAGTAGATCCAACTAACGAGCCCCAGTTTATTCCCAGTCGGTGGGAATTCACTATAGCAGTCATCGTTCGAAGAGCGCATGCCTTGATCCCCATATACTGGTCATCTGACAAACCAAGTACTTCCACAAGTTCATCTATCAAGCTAGGATACAAATGACGTTCATCAACGTCGAATGTATACGATAAAATGGATAATGCTTGAAGTCTGGCACGTATGCACTTATGACGCTGTGTAGGGTCAGCAAAATAAGTTGCTAGTCGAACACGAGAGAACAAAGCCATTTGTTGAGATACGGGTACAGGATGCACAGCTAGTAACTCTTCCATTATTTCGGACGGAAT] [-] EMBL CD190281 [TAAGATATTGAAAACTGCTGGATTACATGATACACTNTCAGATGGCAATGTTGCTGGTGTTTTTCCAAGACTCACAACATGACGCAGACAAGAAATAACACATTTAAAGACAACAGGTTTTAGTTCAGTATGTGATCGAAGAAGTTCTTGTATGGCATTACTCATTTGACTCGCTGTTAAACTATTAGATAAATTTTGACCAGAATTACAATTCATATCATATGATATCTGTGATATAAACTCACGAACACGTTTAGTTTTCATTGTCGTAAGATAATCTGGTGAAACTAATGTATTCAAATAACGATTAATCACACCACTTGATAAAATAGCTTCAATACCACGGGAATTCAAAGCTAAAGTATTCAATAATGCTGGTAACTGTACAAGAAAATCTC ] [+] EMBL CD177955 [ GATACACTTTCAGATGGCAATGTTGCTGGTGTTTTTCCAAGACTCACAACATGACGCAGACAAGAAATAACACATTTAAAGACAACAGGTTTTAGTTCAGTATGTGATCGAAGAAGTTCTTGTATGGCATTACTCATTTGACTCGCTGTTAAACTATTAGATAAATTTTGACCAGAATTACAATTCATATCATATGATATCTGTGATATAAACTCACGAACACGTTTAGTTTTCATTGTCGTAAGATAATCTGGTGGAACTAATGTATTCAAATAACGATTAATCACACCACTTGATAAAATAGCTTCAATACCACGGGAATTCAAAGCTAAAGTATTCAATAATGCTGGTAACTGTACAAGAAAATCTCGATTTTGAGGT ] [+] EMBL CD145449 [ ATAAATTTTGACCAGAATTACAATTCATATCATATGATATCTGTGATATAAACTCACGAACACGTTTAGTTTTCATTGTCGTAAGATAATCTGGTGAAACTAATGTATTCAAATAACGATTAATCACACCACTTGATAAAATAGCTTCAATACCACGGGAATTCAAAGCTAAAGTATTCAATAATGCTGGTAACTGTACAAGAAAATCTCGATTTTGAGGTAACGGTTGTTCCGTTAAGGCTTTTAAAATATCACTTGTAATATTCTTGTCCTGCATAGTTGAAATTCTAGATGGATATGTATAAAGGTAGTTGGTAATAGTTTCCA TAGCGAAAAGTGACAAATGTGGAGTGAAATGGGTGGAACCATTGAGGAAAATTTGACGCAGGACTGAGGGTAGGTTGCCATCCATTACAGAGTGAACTATATCGCCCCATTCCGCGTCCAAACAAAGTCGCTTCAGTAAATTGAGTATAGATTTCATAAGGCCAGAGCGCTGTGTATTCAAAGTCTGTTCATAATCAGAAACGCTCGATTTATTACTTGATGTAGAACTCTGAAGAACAACTTCAACTTCGTNNATTAATCGATCGACCANAATACTTACTACATGTTGACGACTTG ] [-] EMBL CD115582 [ ATAGTTTCCA TAGCGAAAAGTGACAAATGTGGAGTGAAATGGGTGGAACCATTGAGGAAAATTTGACGCAGGACTGAGGGTAGGTTGCCATCCATTACAGAGTGAACTATATCGCCCCATTCCGCGTCCAAACANAGTCGCTTCAGTAAATTGAGTATAGATTTCATAAGGCCAGAGCGCTGTGTATTCAAAGTCTGTTCATAATCAGAAACGCTCGATTTATTACTTGATGTAGAACTCTGAAGAACAACTTCAACTTCGTAATTTAATCGATCGACCAAAATACTTACTACATGTTGACGACTTGAAGAAATACTCAACAGGATTTGATCAGTCACACGAACAGCACGTGTGACATAACTCAAATAATCATTGTGCGGTGTATGCCAAGAAATAAGTTGAGTCATCGTGTCC AAAATACCACTAGAGCTGAGAGTTGTGTTTTGTATA ] [+] EMBL CD127811 [ TTTCCATTAGCGAAAAGTGACAAATGTGGAGTGAAATGGGTGGAACCATTGAGGAAAATTTGACGCAGGACTGAGGGTAGGTTGCCATCCATTACAGAGTGAACTATATCGCCCCATTCCGCGTCCAAACAAAGTCGCTTCAGTAGATTGAGTATAGATTTCATAAGGCCAGAGCGCTGTGTATTCAAAGTCTGTTCATAATCAGAAACGCTCGATTTGTTACTTGATGTAGAACTCTGAAGAACAACTTCAACTTCGTAATTTAATCGATCGACCAAAATACTTACTACATGTTGACGACTTGAAGAAATACTCAACAGGATTTGATCAGTCACACGAACAGCACGTGTGACATA ] [-] EMBL CD115506 [ TGGAGTGAAATGGGTGGAACCATTGAGGAANATTTGACGCAGGACTGAGGGTAGGTTGCCATCCATTACAGAGTGAACTATATCGCCCCATTCCGCGTCCAAACANAGTCGCTTCAGTAAATTGAGTATAGATTTCATAAGGCCAGAGCGCTGTGTATTCAGAGTCTGTTCATAATCAGAAACGCTCGATTTATTACTTGATGTAGAACTCTGAAGAACAACTTCAACTTCGTAATTTAATCGATCGACCAAAATACTTACTACATGTTGACGACTTGAAGAAATACTCAACAGGATTTGATCAGTCACACGAACAGCACGTGTGACATAACTCAAATAATCATTGTGCGGTGTATGCCAAGAAATAAGTTGAGTCATCGTGTCCGGGAGAGTACCACTAGAGCTGAGAGTTGTGTTTTGTATATTTCCTAAATCTGGACCAACGTTTTCTTCATAACAAGCTAGATGATACAAGAAGGATAATAGAGCTGTTGT AAATGCTGATTTGT CTCCCAGCA ] [-] EMBL CD200883 [ gGTATTCAAAGTCTGTTCATAATCAGAAACGCTCGATTTATTACTTGATGTAGAACTCTGAAGAACAACTTCAACTTCGTAATTTAATCGATCGACCAAAATACTTACTACATGTTGACGACTTGAAGAAATACTCAACAGGATTTGATCAGTCACACGAACAGCACGTGTGACATAACTCAAATAATCATTGTGCGGTGTATGCCAAGAAATAAGTTGAGTCATTGTGTCC AAAATACCACTAGAGCTGAGAGTTGTGTTTTGTATATTTC CTGGACCAACGTTTTTTTCATAACAAGCTAGATGATACAAGAAGGATAATAGAGCTGTTGTGAAATGCT ] [+] EMBL CD091931 [ TTGTATATTTC CTGGACCAACGTTTTCTTCATAACAAGCTAGATGATACAAGAAGGATAATAGAGCTGTTGTGAAATGCTGATTTGTACTCCCAGCAGAGGCTTTTATAGAACCGTCTACAAGTCCTTTGATCCATTTTCTGGTCAAATTAGGTAAGATACCGTGATAACTGGATAATCCAGTAGATCCAACTAACGAGCCCCAGTTTATTCCCAGTCGGTGGGAATTCACTATAGCAGTCATCGTTCGAAGAGCGCATGCCTTGATCCCCATATACTGGTCATCTGACAAACCAAGTACTTCCACAAGTTCATCTATCAAGCTAGGATACAAATGACGTTCATCAACGTCGAATGTATACGATAAAATGGATAATGCTTGAAGTCTGGCACGTATGCACTTATGACGCTGTGTAGGGTCAGCAAAATAAGTTGCT ] [-] EMBL CD165833 [ GTGATAACTGGATAATCCAGTAGATCCAACTAACGAGCCCCAGTTTATTCCCAGTCGGTGGGAATTCACTATAGCAGTCATCGTTCGAAGAGCGCATGCCTTGATCCCCATATACTGGTCATCTGACAAACCAAGTACTTCCACAAGTTCATCTATCAAGCTAGGATACAAATGACGTTCATCAACGTCGAATGTATACGATAAAATGGATAATGCTTGAAGTCTGGCACGTATGCACTTATGACGCTGTGTAGGGTCAGCAAAATAAGTTGCTAGTCGAACACGAGAGAACAAAGCCATTTGTTGAGATACGGGTACAGGATGCACAGCTAGTAACTCTTCCATTATTTCGGACGGAAT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||