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Schistosoma mansoni
cluster # 9417 cluster # 9417       Sequences # 9       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9417#0 length = 1294 sequences # 9  

consensusID : consensus_9417#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1294
fasta sequence
                              [ATACAACATTAGGGAATGTGAAAGAAATGAATAAGGTACATAATTGGTCTGTACAAATAAGTATAATACATGGGGACAAAGTTGATATGGAACACGAAATCACTGTACACCCGTAATGCGTTAGAACTATGCACATGAGTTGACAATATACATAAAAATACCACTATATCTTAAACATAACTGAGAGAAATTAAAAACATAACAAATAAGTAAAAGCTGTACATAACATACATTAGGAATGAAATATAGAATACTAAGTGGCATGAAATGTACAAATCCAAGTGAAGTATGTAAAGGCACTATAAACTATACTGGATGGTTATTGAGAAGCACTAGACTGGGTTGAAT-AATAATCTAGGGAGTCGAAGTATA-CCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTACAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTGTCGCTTCTATCTTCTAAGTCAAAATTATAGTCATAACATAACTCTTCACCCTTTTTTATCCGTCTGTTAGTAATTATCACAATATGTGAATGACCACCGAAGTTGACGAACTCAGCGAGGCAGTTTGGTTGGCAGGAATGGTTAATATATCGAGCGAGTCCCCCACAAACAGTCGCATCAATTACTGTATCATCATCAAGACGAAACATATATATGCCTCTGTTATGAGCTTCATAGTTCTTTTCTCTTTTATTGGCTATTTCTAAGCGGATTAACTCACCTACGTATTCAATTACCATAGTTTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATCCCTGAATACGCGATCGACCGAGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTTTGATGCTGTTTTGATGCCGTATCTATATTATACACTCCGTTGCTACAAGTTGTTCCATTGAAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATTAAATGAAATGGAATATTCGCCAGCATCATGCATACGTTTCACATAAGTTTGCATTTTCGGCTCTGATCGTGCACATCCAGATGGGTTTATGGCTAACGGCATTTCAGATATTAATTCAAGACGTCCGAAATTGAAAACATAATCCCTCAAACCCTCTACACCTGGTAGAGATTCTACGGCTCGAACTATATGAGATTCGTTTAAACCAATAAAATC-TCCCCTCTAAGAAG-TGTGGGAAAAGTTTTACTAATTTATGTTCTTTACAAAGAACCTCATTTCGTGAC]

[+] EMBL CD181960             [ATACAACATTAGGGAATGTGAAAGAAATGAATAAGGTACATAATTGGTCTGTACAAATAAGTATAATACATGGGGACAAAGTTGATATGGAACACGAAATCACTGTACACCCGTAATGCGTTAGAACTATGCACATGAGTTGACAATATACATAAAAATACCACTATATCTTAAACATAACTGAGAGAAATTAAAAACATAACAAATAAGTAAAAGCTGTACATAACATACATTAGGAATGAAATATAGAATACTAAGTGGCATGAAATGTACAAATCCAAGTGAAGTATGTAAAGGCACTATAAACTATACTGGATGGTTATTGAGAAGCACTAGACTGNGTTGAAT AATAATCTAGGGAGTCGAAGTATACCCTATCTACATAATTTGTCTCAC AAAAGTATTGCAAACAAAGATTTACNAAGCTACTAGTTCATCCATTTTCGACAATTNGNAGCTCTGCAANNGCAAGGAATTTTGTCGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD126254             [                                                                                                                                                                                       AGAGAAATTAAAAACATAACAAATAAGTAAAAGCTGTACATAACATACATTAGGAATGAAATATAGAATACTAAGTGGCATGAAATGTACAAATCCAAGTGAAGTATGTAAAGGCACTATAAACTATACTGGATGGTTATTGAGAAGCACTAGACTGGGTTGAAT AATAATCTAGGGAGTCGAAGTATA CCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTACAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTGTCGCTTCTATCTTCTAAGTCAAAATTATAGTCATAACATAACTCTTCACCCTTTTTTATCCGTCTGTTAGTAATTATCACAATATGTGAATGACCACCGAAGTTGACGAACTCAGCGAGGCAGTTTGGTTGGCAGGAATGGTTAATATATCGAGCGAGTCCCCCACAAACAGTCGCATCAATTACTGTATCATCATCAAGACGAAACATATATATGCCTCTGTTAT AGCTTCATAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD182146             [                                                                                                                                                                                                                                                                                                                                      GAAGCACTAGACTGGGTTGAAT AATAATCTAGGGAGTCGAAGTATA CCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTACAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTGTCGCTTCTATCTTCTAAGTCAAAATTATAGTCATAACATAACTCTTCACCCTTTTTTATCCGTCTGTTAGTAATTATCACAATATGTGAATGACCACCGAAGTTGACGAACTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD077569             [                                                                                                                                                                                                                                                                                                                                         GCACTAGACTGGGTTGAATAAATAATCTAGGGAGTCGAAGTATA CCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTACAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTGTCGCTTCTATCTTCTAAGTCAAAATTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD161322             [                                                                                                                                                                                                                                                                                                                                                                   CTAGGGAGTCGAAGTATA CCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTACAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTGTCGCTTCTATCTTCTAAGTCAAAATTATAGTCATAACATAACTCTTCACCCTTTTTTATCCGTCTGTTAGTAATTATCACAATATGTGAATGACCACCGAAGTTGACGAACTCAGCGAGGCAGTTTGGTTGGCAGGAATGGTTAATATATCGAGCGAGTCCCCCACAAACAGTCGCATCAATTACTGTATCATCATCAAGACGAAACATATATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD078422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACTCAGCGAGGCAGTTTGGTTGGCAGGAATGGTTAATATATCGAGCGAGTCCCCCACAAACAGTCGCATCAATTACTGTATCATCATCAAGACGAAACATATATATGCCTCTGTTATGAGCTTCATAGTTCTTTTCTCTTTTATTGGCTATTTCTAAGCGGATTAACTCACCTACGTATTCAATTACCATAGTTTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATCCCTGAATACGCGATCGACCGAGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTTTGATGCTGTTTTGATGCCGTATCTATATTATACACTCCGTTGCTACAAGTTGTTCCATTGAAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATTAAATGAAATGGAATATTCGCCAGCATCATGCATACGTTTCACATAAGTTTGCATTTTCGGCTCTGATCGTGCACATCCAGATGGGTTTATGGCTAACGGCATTTCAGATATTAATTCAAGACGTCCGAAATTGAAAACATAATCCCTCAAACCCTCTACACCTGGTAGAGATTCTACGGCTCGAACTATATGAGATTCG                                                                                       ]
[+] EMBL CD137617             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATATATCGAGCGAGTCCCCCACAAACAGTCGCATCAATTACTGTATCATCATCAAGACGAAACATATATATGCCTCTGTTATGAGCTTCATAGTTCTTTTCTCTTTTATTGGCTATTTCTAAGCGGATTAACTCACCTACGTATTCAATTACCATAGTTTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATCCCTGAATACGCGATCGACCGAGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTTTGATGCTGTTTTGATGCCGTATCTATATTATACACTCCGTTGCTACAAGTTGTTCCATTGAAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATCAAATGAAATGGAATATTCGCCAGCATCATGCATACGTTTCACATAAGTTTGCATTTTCGGCTCTGATCGTGCACATCCAGATGGGTTTATGGCTAACGGCATTTCAGATATTAATTCAAGACGTCCGAAATTGAAAACATAATCCCTCANACCCTCTACACCTGGTAGAGATTCTACGGCTCGAACTATATGAGATTCGTTTAAACCAATAAAATC TCCCCTCTAAGAAG TGTGGGAAAAGTTTTACTAATTTATGTTCTTTACAAAGAACCTCATTTCGTGA ]
[-] EMBL CD158309             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GATTAACTCACCTACGTATTCAATTACCATAGTGTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATCCCTGAATACGCGATCGACCGAGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTTTGATGCTGTTTTGATGCCGTATCTATATTATACACTCCGTTGCTACAAGTTGTTCCATTGAAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATTAAATGAAATGGAATATTCGCCAGCATCATGCATACGTTTCACATAAGTTTGCATTTTCGGCTCTGATCGTGCACATCCAGATGGGTTTATGGCTAACGGCATTTCAGATATTAATTCAAGACGTCCGAAATTGAAAACATAATCCCTCAAACCCTCTACACCTGGTAGAGATTCTACGGCTCGAACTATATGAGATTCGTTTAAACCAAATAAATCTTCCCCTCTAAGAAGTTGTGGGAAAAGTTTTACTAATTTATGTTCTTTACAAAGAACCTCAATTCGTGAC]
[+] EMBL CD135790             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CACCTACGTATTCAATTACCATAGTTTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATGCCTGAATACTCTATCGACCGAGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTTTGATGCTGTTTTGATGCCGTAACTATATTATACACTCCGTTGCTACAAGTTGTTCCATTGAAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATTAAATGAAATGGAATATTCG                                                                                                                                                                                                                                                                           ]


>consensus_9417#0 ATACAACATTAGGGAATGTGAAAGAAATGAATAAGGTACATAATTGGTCTGTACAAATAA GTATAATACATGGGGACAAAGTTGATATGGAACACGAAATCACTGTACACCCGTAATGCG TTAGAACTATGCACATGAGTTGACAATATACATAAAAATACCACTATATCTTAAACATAA CTGAGAGAAATTAAAAACATAACAAATAAGTAAAAGCTGTACATAACATACATTAGGAAT GAAATATAGAATACTAAGTGGCATGAAATGTACAAATCCAAGTGAAGTATGTAAAGGCAC TATAAACTATACTGGATGGTTATTGAGAAGCACTAGACTGGGTTGAATAATAATCTAGGG AGTCGAAGTATACCTATCTACAATAGTTGTCTCACAAAAAGTATTGCAAACAAAGATTTA CAAAGCTACTAGTTCATCCATTTCCGACAATTTGGAGCTCTGCAAAGGCAAGGAATTTTG TCGCTTCTATCTTCTAAGTCAAAATTATAGTCATAACATAACTCTTCACCCTTTTTTATC CGTCTGTTAGTAATTATCACAATATGTGAATGACCACCGAAGTTGACGAACTCAGCGAGG CAGTTTGGTTGGCAGGAATGGTTAATATATCGAGCGAGTCCCCCACAAACAGTCGCATCA ATTACTGTATCATCATCAAGACGAAACATATATATGCCTCTGTTATGAGCTTCATAGTTC TTTTCTCTTTTATTGGCTATTTCTAAGCGGATTAACTCACCTACGTATTCAATTACCATA GTTTGTTGTTCCAAATCCCGTGCAGCAAATAAACCTAATCCCTGAATACGCGATCGACCG AGAATAACGTTGGAATTAACTTCTGTCTTTAATTTTCGATACTGTTGAGAACGACTGCTT TGATGCTGTTTTGATGCCGTATCTATATTATACACTCCGTTGCTACAAGTTGTTCCATTG AAACTTGGATGAGATAAACGTCGAACACCCGGTAGACTTGTTCGGTGATTAAATGAAATG GAATATTCGCCAGCATCATGCATACGTTTCACATAAGTTTGCATTTTCGGCTCTGATCGT GCACATCCAGATGGGTTTATGGCTAACGGCATTTCAGATATTAATTCAAGACGTCCGAAA TTGAAAACATAATCCCTCAAACCCTCTACACCTGGTAGAGATTCTACGGCTCGAACTATA TGAGATTCGTTTAAACCAATAAAATCTCCCCTCTAAGAAGTGTGGGAAAAGTTTTACTAA TTTATGTTCTTTACAAAGAACCTCATTTCGTGAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)