These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9440#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 658 fasta sequence [ACTGGCTAGACCGAAAGCGCAAATAGTATAAAGTAACAGCGAAATAATAGGTGCACGTCCGGGTGTTGAATCACGAAGAATCGGTAAGTGACGAAAGGCAGATTTCAAACGTCCAATGGAGTGTGGCCATTCGTTCAATTCAGCTTCATTAGTTTCACGTATAACCTTTTCGTTATTTAAACGTTCATCAGTTGGAAAATTAAGATTCTCTTCATGGGATTCTAATTCATTCCATTGACCAGAATATAGTTGCGGTTGACAATAACGCAGAATACATACATTCATTGAGACAATTGTATAGGCGATTAGTGTTCCAATGCTTAAAAAGTCAGCTAATAAATGAATATCGCATAAAAGAGTCAGTATTGCAGCGAATATTCCAAATAAACTTAATGCAACGACTGGTACTTGTGTAGATGGTAATAGGTAGCCTAGAAATTCAGGCAATAAACCATCACTTGCCATAGCATACACTACTCTTGGCATTGCATACATACTTGTAAATAAACTGGCACTTAATCCAAGCAATGAGCCAACTCCTGTTATATATGTAGCCCATTCATAATTGCGAACATGAAAAGCAGCTG-TAAAGCAGCCTGTCGGTCAACTGTCCACCATGGTACANAAAGTGTCAAAGCCAAGCTAGCCAATANAAATA] [+] EMBL CD189109 [ACTGGCTAGACCGAAAGCGCAAATAGTATAAAGTAACAGCGAAATAATAGGTGCACGTCCGGGTGTTGAATCACGAAGAATCGGTAAGTGACGAAAGGCAGATTTCAAACGTCCAATGGAGTGTGGCCATTCGTTCAATTCAGCTTCATTAGTTTCACGTATAACCTTTTCGTTATTTAAACGTTCATCAGTTGGAAAATTAAGATTCTCTTCATGGGATTCTAATTCATTCCATTGACCAGAATATAGTTGCGGTTGACAATAACGCAGAATACATACACTCATTGAGACAATTGTATAGGCGATTAGTGTTCCAATGCTTAAAAAGTCAGCTAATAAATGAATATCGCATAAAAGAGTCAGTATTGCAGCGAATATTCCAAATAAACTTAATGCAACGACTGGTACTTGTGTAGATGGTAATAGGTAGCCTAGAAATTCAGGCAATAAACCATCACTTGCCATAGCATACACTACTCTTGGCATTGCATACATACTTGTAAATAAACTGG ] [-] EMBL CD189452 [ CTGGCTAGACCGAAAGCGCAAATAGTATAAAGTACCAGCGAAATAATAGGTGCACGTCCGGGTGTTGAATCACGAAGAATCGGTAAGTGACGAAAGGCAGATTTCAAACGTCCAATGGAGTGTGGCCATTCGTTCAATTCAGCTTCATTAGTTTCACGTATAACCTTTTCGTTATTTAAACGTTCATCAGTTGGAAAATTAAGATTCTCTTCATGGGATTCTAATTCATTCCATTGACCAGAATATAGTTGCGGTTGACAATAACGCAGAATACATACATTCATTGAGACAATTGTATAGGCGATTAGTGTTCCAATGCTTAAAAAGTCAGCTAATAAATGAATATCGCATAAAAGAGTCAGTATTGCAGCGAATATTCCAAATAAACTTAATGCAACGACTGGTACTTGTGTAGATGGTAATAGGTAGCCTAGAAATTCAGGCAATAAACCATCACTTGCCATAGCATACACTACTCTTGGCATTGCATACATACTTGTAAATAAACTGGCACTTAATCCAAGCAATGAGCCAACTCCTGTTATA ] [+] EMBL CD063841 [ acaagtGACCGAAAGCGCAAATAGTATAAAGT ACAGCGAAATAATAGGTGCACGTCCGGGTGTTGAATCACGAAGAATCGGTAAGTGACGAAAGGCAGATTTCAAACGTCCAATGGAGTGTGGCCATTCGTTCAATTCAGCTTCATTAGTTTCACGTATAACCTTTTCGTTATTTAAACGTTCATCAGTTGGAAAATTAAGATTCTCTTCATGGGATTCTAATTCATTCCATTGACCAGAATATAGTTGCGGTTGACAATAACGCAGAATACATACATTCATTGAGACAATTGTATAGGCGATTAGTGTTCCAATGCTTAAAAAGTCAGCTAATAAATGAATATCGCATAAAAGAGTCAGTATTGCAGCGAATATTCCAAATAAACTTAATGCAACGACTGGTACTTGTGTAGATGGTAATAGGTAGCCTAGAAATTCAGGCAATGAACCATCACTTGCCATAGCATACACTACTCTTGGCATTGCATACATACT ] [+] EMBL CD063654 [ gacagtgaCGAAAGCGCAAATAGTATAAAGTAA AGCGAAATAATAGGTGCACGTCCGGGTGTTGAATCACGAAGAATCGGTAAGTGACGAAAGGCAGATTTCAAACGTCCAATGGAGTGTGGCCATTCGTTCAATTCAGCTTCATTAGTTTCACGTATAACCTTTTCGTTATTTAAACGTTCATCAGTTGGAAAATTAAGATTCTCTTCATGGGATTCTAATTCATTCCATTGACCAGAATATAGTTGCGGTTGACAATAACGCAGAATACATACATTCATTGAGACAATTGTATAGGCGATTAGTGTTCCAATGCTTAAAAAGTCAGCTAATAAATGAATATCGCATAAAAGAGTCAGTATTGCAGCGAATATTCCAAATAAACTTAATGCAACGACTGGTACTTGTGTAGATGGTAATAGGTAGCCTAGAAATTCAGGCAATAAACCATCACTTGCCATAGCATACACTACTCTTGGCATTGCATACATACTTGTAAATAAACTGGCACTTAATCCAAG ] [+] EMBL CD166176 [ ATAGTAT AAGTAACAGCGAAATAATAGGTGCACGTCCGGGTGTTGAATCACGAAGAATCGGTAAGTGACGAAAGGCAGATTTCAAACGTCCAATGGAGTGTGGCCATTCGTTCAATTCAGCTTCATTAGTTTCACGTATAACCTTTTCGTTATTTAAACGTTCATCAGTTGGAAAATTAAGATTCTCTTCATGGGATTCTAATTCATTCCATTGACCAGAATATAGTTGCGGTTGACAATAACGCAGAATACATACATTCATTGAGACAATTGTATAGGCGATTAGTGTTCCAATGCTTAAAAAGTCAGCTGATAAATGAATATCGCATAAAAGAGTCAGTATTGCAGCGAATATTCCAAATAAACTTAATGCAACGACTGGTACTTGTGTAGATGGTAATAGGT ] [+] EMBL CD096372 [ AAGAATCGGTAAGTGACGAAAGGCAGATTTCAAACGTCCAATGGAGTGTGGCCATTCGTTCAATTCAGCTTCATTAGTTTCACGTATAACCTTTTCGTTATTTAAACGTTCATCAGTTGGAAAATTAAGATTCTCTTCATGGGATTCTAATTCATTCCATTGACCAGAATATAGTTGCGGTTGACAATAACGCAGAATACATACATTCATTGAGACAATTGTATAGGCGATTAGTGTTCCAATGCTTAAAAAGTCAGCTAATAAATGAATATCGCATAAAAGAGTCAGTATTGCAGCGAATATTCCAAATAAACTTAATGCAACGACTGGTACTTGTGTAGATGGTAATAGGTAGCCTAGAAATTCAGGCAATAAACCATCACTTGCCATAGCATACACTACTCTTGGCATTGCATACATACTTGTAAATAAACTGGCACTTAATCCAAGCAATGAGCCAACTCCTGTTATATATGTAGCCCATTCATAATTGCGAACATGAAAAGCAGCTGNTAAAGCAGCCTGTCGGTCAACTGTCCACCATGGTACANAAAGTGTCAAAGCCAAGCTAGCCAATANAAATA] [-] EMBL CD166239 [ AGTGTGGCCATTCGTTCAATTCAGCTTCATTAGTTTCACGTATAACCTTTTCGTTATTTAAACGTTCATCAGTTGGAAAATTAAGATTCTCTTCATGGGATTCTAATTCATTCCATTGACCAGAATATAGTTGCGGTTGACAATAACGCAGAATACATACATTCATTGAGACAATCGTATAGGCGATTAGTGTTCCAATGCTTAAAAAGTCAGCTAATAAATGAATATCGCATAAAAGAGTCAGTATTGCAGCGAATATTCCAAATAAACTTAATGCAACGACTGGTACTTGTGTAGATGGTAATAGGTAGCCTAGAAATTCAGGCAATAAACCATCACTTGCCATAGCATACACTACTCTTGGCATTGCATACATACTTGTAAATAAACTGGCACTTAATCCAAGCAATGAGCCAACTCCTGTTATATATGTAGCCCATTCATAATTGCGGACATGAAAAGCAGCTA AAAA ] [-] EMBL CD063731 [ CTTTTCGTTATTTAAACGTTCATCAGTTGGAAAATTAAGATTCTCTTCATGGGATTCTAATTCATTCCATTGACCAGAATATAGTTGCGGTTGACAATAACGCAGAATACATACATTCATTGAGACAATTGTATAGGCGATTAGTGTTCCAATGCTTAAAAAGTCAGCTAATAAATGAATATCGCATAAAAGAGTCAGTATTGCAGCGAATATTCCAAATAAACTTAATGCAACGACTGGTACTTGTGTAGATGGTAATAGGTAGCCTAGAAATTCAGGCAATAAACCATCACTTGCCATAGCATACACTACTCTTGGCATTGCATACATACTTGTAAATAAACTGGCACTTAATCCAAGCAATGAGCCAACTCCTGTTATATATGTAGCCCATTCATAATTGCGAACATGAAAAGCAGCTG TAAAa ] [+] EMBL CD126491 [ cggggTATAGTTGCGGTTGACAATAACGCAGAATACATACATTCATTGAGACAATTGTATAGGCGATTAGTGTTCCAATGCTTAAAAAGTCAGCTAATAAATGAATATCGCATAAAAGAGTCAGTATTGCAGCGAATATTCCAAATAAACTTAATGCAACGACTGGTACTTGTGTAGATGGTAATAGGTAGCCTAAAAATTCAGGCAATAAACCATCACTTGCCATAGCATACACTACTCTTGGCATTGCATACATACTTGTAAATAAACTGGCACTTAATCCAAGCAATGAGCCAACTCCTGTTATATATGTAGTCCATTCATAATTGCGAACATGAAAAGCAGCTG TAAA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||