These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9456#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1432 fasta sequence [TTCAGTTGATATCTAGTAGAAGAATCTGTCGGTATCCGATGATTAGGTCGATAACTTGGTGGTGTTTTACATTGCATTTGACGTTGTACATTCAATGTCGTCTGTGGCAAAATATGCATAGGTTTTTGATCAGTTGAACAGATTTCTTTCTTTATATTATTTTGAAGTTGTTTATCACGAAGTATAGTATGCAAAGACGTTGTAAAAATGGTAGTTTCTTCAACTGTACGTACATGAACGTGATCAAATGAACTGCCGATTAAGTCAAATGGTGGTGGATTACCAACAGGCAATGCTTGTATCCAACCTTGATACAAAGCTTCTTCGATTGAATATAAATTTCCACTTACTGAATGAGTATATGAACAATGGATAGGATCAATAATACCAGTCCTTATTGCATCAGATACTGGAAGTAAACTATTCAAATGGGGATCAAATACTCTTTCTAAACGATATATATCATGACGATAATGAAATACTTCTAACCAATATAAAGAATTAGATGTTTGCTGATCATTTTCCAAATGTTGTTCAGCTTGAGTAAAAACAATACCGAAAACAAAACCTTTTGTTAATGCTTCTGGAATAGGATAGAATTTCCCACTGATTGGATCACAAATAGTTTTTCTATGCACGTCAACACGACCTTCACGAACCATTGTATCGGTGATAGAGGCTTCAACACGTACATCATCATGTAGATAATAGAAAGCATAAAGTACGCAATTACGTTCTTTCAGTTTAGGTATATCACAGCTTTTTATTCTAGGCTTTTTACGAATAGTATATTCATCTCCATCATTTACCGCAGGTTTTGAACGTAAATTACAATGAGATGATTTTCCACGTAGTCGTCCAACACCATGACAATCTAAAAATTTAATCAATCTTGATTCACTACGACCACTGTTAGCAATAAAACCATTTCCATTACTAAATAAATGGCCAGATGGTATAACAGGAGGCAATGTGTTATTGCGTAAGTCAGCAGCATAATTGGAATCTTTTGCACTTCGTCTTTTGATAGCTAATAAGGAATCCATACTATGAGTATATCCTTTATTTGGCAAACCATTGAGATTTTCAAGAAATGTTTCAGTAGCCGGAGGTTTCAATAATCCTTGTTTAATAGCGTCATGAACGTTTATAGAATTGGACTGATTAGAATTATTAGTGTTATCTGATTGATGAAAAGTATTTGAGGCTGGATCAATTAATCCTTTCTCAAGAGCTTCTTCGAAAGTCGGTATTTCTGTTGGTAATTTCTTTTCAGCTATCAAACCTCGACTTATAGCATCAGTCAATGGAATCCATTTATTTTTATGCAACAAAACACCTTTATGATCATTGATTAAACCAACTGAAATAGCTTTATCCAATGAATACAATTTTTTCTGTGTCAAATTCTTTCACTATTGAATGTTCAATA] [+] EMBL CD201545 [TTCAGTTGATATCTAGTAGAAGAATCTGTCGGTATCCGATGATTAGGTCGATAACTTGGTGGTGTTTTACATTGCATTTGACGTTGTACATTCAATGTCGTCTGTGGCAAAATATGCATAGGTTTTTGATCAGTTGAACAGATTTCTTTCTTTATATTATTTTGAAGTTGTTTATCACGAAGTATAGTATGCAAAGACGTTGTAAAAATGGTAGTTTCTTCAACTGTACGTACATGAACGTGATCAAATGAACTGCCGATTAAGTCAAATGGTGGTGGATTACCAACAGGCAATGCTTGTATCCAACCTTGATACAAAGCTTCTTCGATTGAATATAAATTTCCACTTACTGAATGAGTATATGAACAATGGATAGGATCAATAATACCAGTCCTTATTGCATCAGATACTGGA ] [+] EMBL CD168740 [ AAATGGTGGTGGATTACCAACAGGCAATGCTTGTATCCAACTTTGATACAAAGCTTCTTCGATTGAATATAAATTTCCACTTACTGAATGAGTATATGAACAATGGATAGGATCAATAATACCAGTCCTTATTGCATCAGATACTGGAAGTAAACTATTCAAATGGGGATCAAATACTCTTTCTAAACGATATATATCATGACGATAATGAAATACTTCTAACCAATATAAAGAATTAGATGTTTGCTGATCATTTTCCAAATGTTGTTCAGCTTGAGTAAAAACAATACCGAAAACAAAACCTTTTGTTAATGCTTCTGGAATAGGATAGGATTTCCCACTGATTGGATCACAAATAGTTTTTCTATGCACGTCAACACGACCTTCACGAACCATTGTATCGGTGATAGAGGCTTCAACACGTACATCATCATGTAGATAATAGAAAGCATAAAGTACGCAATTACGTTCTTTCAGTTTAGGTATATCACAGCTTTT ] [+] EMBL CD089365 [ AGTATATGAACAATGGATAGGATCAATAATACCAGTCCTTATTGCATCAGATACTGGAAGTAAACTATTCAAATGGGGATCAAATACTCTTTCTAAACGATATATATCATGACGATAATGAAATACTTCTAACCAATATAAAGAATTAGATGTTTGCTGATCATTTTCCAAATGTTGTTCAGCTTGAGTAAAAACAATACCGAAAACAAAACCTTTTGTTAATGCTTCTGGAATAGGATAGAATTTC ] [-] EMBL CD117882 [ GTATATGAACAATGGATAGGATCAATAATACCAGTCCTTATTGCATCAGATACTGGAAGTAAACTATCCAAATGGGGATCAAATACTCTTTCTAAACGATATATATCATGACGATAATGAAATACTTCTAACCAATATAAAGAATTAGATGTTTGCTGATCATTTTCCAAATGTTGTTCAGCTTGAGTAAAAACAATACCGAAAACAAAACCTTTTGTTAATGCTT ] [+] EMBL CD132210 [ AGAATTTCCCACTGATTGGATCACAAATAGTTTTTCTATGCACGTCAACACGACCTTCACGAACCATTGTATCGGTGATAGAGGCTTCAACACGTACATCATCATGTAGATAATAGAAAGCATAAAGTACGCAATTACGTTCTTTCAGTTTAGGTATATCACAGCTTTTTATTCTAGGCTTTTTACGAATAGTATATTCATCTCCATCATTTACCGCAGGTGTTGAACGTGAATTACAATGAGATGATTTTCCACGTAGTCGTCCAACACCATGACCATCTAAAAATTTAATCAATCTTGATTCACTAC ] [-] EMBL CD184691 [ TAGTTNTTCTATGCACGTCAACACGACCTTCACGAACCATTGTATCGGTGATAGAGGCTTCAACACGTACATCATCATGTAGATAATAGAAAGCATAAAGTACGCAATTACGTTCTTTCAGTTTAGGTATATCACAGCTTTTTATTCTAGGCTTTTTACGAATAGTATATTCATCTCCATCATTTACCGCAGGTTTTGAACGTAAATTACAATGAGATGATTTTCCACGTAGTCGTCCAACACCATGACAATCTAAAAATTTAATCAATCTTGATTCACTACGACCACTGTTAGCAATAAAACCATTTCCATTACTAAATAAATGGCCAGATGGTATAACAGGAGGCAATGTGTTATTGCGTAAGTCAGCAGCATAATTGGAATCTTTTGCACTTCGTCTTTTGATAGCTAATAAGGAATCCATACTATG ] [-] EMBL CD111027 [ ATATTCATCTCCATCATTTACCGCAGGTTTTGAACGTAAATTACAATGAGATGATTTTCCACGTAGTCGTCCAACACCATGACAATCTAAAAATTTAATCAATCTTGATTCACTACGACCACTGTTAGCAATAAAACCATTTCCATTACTAAATAAATGGCCAGATGGTATAACAGGAGGCAATGTGTTATTGCGTAAGTCAGCAGCATAATTGGAATCTTTTGCACTTCGTCTTTTGATAGCTAATAAGGAATCCATACTATGAGTATATCCTTTATTTGGCAAACCATTGAGATTTTCAAGAAATGTTTCAGTAGCCGGAGGTTTCAATAATCCTTGTTTAATAGCGTCATGAACGTTTATAGAATTGGACTGATTAGAATTATTAGTGTTATCTGATTGATGAAAAGTATTTGAGGCTGGATCAATTAATCCTTTCTCAAGAGCTTCTTCGAAAGTCGGTATTTCTGTT ] [-] EMBL CD170621 [ TTTGATAGCTAATAAGGAATCCATACTATGAGTATATCCTTTATTTGGCAAACCGTTGAGATTTTCAAGAAATGTTTCAGTAGCCGGAGGTTTCAATAATCCTTGTTTAATAGCGTCATGAACGTTTATAGAATTGGACTGATTAGAATTATTAGTGTTATCTGATTGATGAAAAGTATTTGAGGCTGGATCAATTAATCCTTTCTCAAGAGCTTCTTCGAAAGTCGGTATTTCTGTTGGTAATTTCTT ] [-] EMBL CD063160 [ ccgaATAGCTAATAAGGAATCCATACTATGAGTATATCCTTTATTTGGCAAACCATTGAGATTTTCAAGAAATGTTTCAGGAGCCGGAGGTTTCAATAATCCTTGTTTAATAGCGTCATGAACGTTTATAGAATTGGACTGATTAGAATTATTAGTGTTATCTGATTGATGAAAAGTATTTGAGGCTGGATCAATTAATCCTTTCTCAAGAGCTTCTTCGAAAGTCGGTATTTCTGTTGGTAATTTCTTTTCAGCTATCAAACCTCGACTTATAGCATCAGTCAATGGAATCCATTTATTTTTATGCAACAAAACACCTTTATGATCATTGATTAAACCAACTGAAATAGCTTTATCCAATGAATACAATTTTTTCTGTGTCAAATTCTTTCACTATTGAATGTTCAATA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||