These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9474#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1266 fasta sequence [TAGAAAAGAAAGTCTTTCAACAGCACGCTGAATTATGCGGTTTAAGTGAAATTGAAGCGAAAGTGAAATATTGTCAATTTTGTCGTTCATTAANAACTTATGGAATACCATTTTTCCTAGTAAAAGAACGAATCAAAGGCAAAAATAAATTGATACCACGTTTGTTGGGTATAACAAAGGATAGTGTAGTTCGGTTAGATGAAAAAACCAAAG-AGTTTTGAAAATTTGGCCGCTTACATCGATTTGTAAATGGGCTGCCTCACCACATGCATTTACTATGGATTTTGGCGAATATTCACCAGATGAATATTACACGGCTCAAACATCAGAAGGTGAACAGATCTCTCAACTAATTGCTGGTTACATTGATATCGTATTGAAAAAACAAAAAGCTACTGATCATCCCGGTTTGCAAGGTGATGAAGAGTCTGCAATGTATGAAGAAAATGTTCAAGCTGAACGGGCT-ACGA-TTGTTCAGCATCAACGTGTTCCTGTTCGTGTTCGAGGAAAAGATCAACTTGTCAATGGTGTAGTTGAAAAACCATTCGACCATCACCAACACAGAAATGATTTAGCTAGTCATCAAATCCATACAAATGGTGTATGGTCTATTCATCAACAAAATAATCTTGTAGGTGATGAAAATTCTACAGTAATCGATGGTCAAAGTATATTAACAGCAACAACAACACGCCAAATGTCACCTGATAACTTTATGACTGGTGGAACTCATATTTTCCACTATCAAGAAATGTCTCCAGC-ACAAAAATCTCT-TTTAATT-ACAATTAATGAAGATTTGGAAACATTACAAGCTGCTAAAGAACATTTAGATATTGGTCCACCAACTGAACGTCACCTACTCAATGTT-GGAACAGATGAAGCATCT-AAACGTTGGTTAAGTGAATCTATGGGTGCCAGTCAAGCGAAGGTGACTGATGAGGTCGGTGCTATGAATGCTGCTGTAGCTCAAGCTTTACGTTCAGCTAATCGAGCTGAATCAACTGATATCAATGCTGTACAACAAGGTCAACCATTAGATCAAATACATGATCCTGGTGATGATTTGATGATGATGCAACAATCATTTCGTGTAGTTACAATTCATTTCCCTGCATTTGTTGATGATTTAAAACGTGTCGCTGTACTACGACGTGAATCTGGTGCTTTAAAAGCTGATCAAACTGGTCAACCAATTATTGCTGAGAAAACTGAAGGATCAACCTCATGGCCAATCACTAGTGAATTACGCGGGCCGCCCTGCCAGGT] [-] EMBL CD185217 [TAGAAAAGAAAGTCTTTCAACAGCACGCTGAATTATGCGGTTTAAGTGAAATTGAAGCGAAAGTGAAATATTGTCAATTTTGTCGTTCATTAANAACTTATGGAATACCATTTTTCCTAGTAAAAGAACGAATCAAAGGCAAAAATAAATTGATACCACGTTTGTTGGGTATAACAAAGGATAGTGTAGTTCGGTTAGATGAAAAAACCAAA ] [+] EMBL CD201560 [ TTATGCGGTCTAAGTGAAATTGAAGCGAAAGTGAAATATTGTCAATTTTGTCGTTCATTAAAAACTTATGGAATTACATTTTTCCTAGTAAAAGAACGAATCAAAGGCAAAAATAAATTGATACCACGTTTGTTGGGTATAACAAAGGATAGTGTAGTTCGATTAGATGAAAAAACCAAAGAAGTTTTGAAAATTTGGCCGCTTACATCGATTTGTAAATGGGCTGCCTCACCACATGCATTTACTATGGATTTTGGCGAATATTCACCAGATGAATATTACAC ] [+] EMBL CD188562 [ AAG AGTTTTGAAAATTTGGCCGCTTACATCGATTTGTAAATGGGCTGCCTCACCACATGCATTTACTATGGATTTTGGCGAATATTCACCAGATGAATATTACACGGCTCAAACATCAGAAGGTGAACAGATCTCTCAACTAATTGCTGGTTACATTGATATCGTATTGAAAAAACAAAAAGCTACTGATCATCCCGGTTTGCAAGGTGATGAAGAGTCTGCAATGTATGAAGAAAATGTTCAAGCTGAACGGGCT ACGA TTGTTCAGCATCAACGTGTTCCTGTTCGTGTTCGAGGAAAAGATCAACTTGTCAATGGTGTAGTTGAAAAACCATTCGACCATCACCAACACAGAAATGATTTAGCTAGTCATCAAATCCATACAAATGGTGTATGGTCTATTCATCAACAAAATAATCTTGTAGGTGATGAAAATTCTACAGTAATCGATGGTCAAAGTATATTAACAGCAACAACAACACGCCAAATGTCACCTGATAACTTTATGACTGGTGGAACTCATATTTTCCACTATCA ] [+] EMBL CD068486 [ CAAAAAGCTACTGATCATCCCGGTTTGCAAGGTGATGAAGAGTCTGCAATGTATGAAGAAAATGTTCAAGCTGAACGGGCT ACGA TTGTTCAGCATCAACGTGTTCCTGTTCGTGTTCGAGGAAAAGATCAACTTGTCAATGGTGTAGTTGAAAAACCATTCGACCATCACCAACACAGAAATGATTTAGCTAGTCATCAAATCCATACAAATGGTGTATGGTCTATTCATCAACAAAATAATCTTGTAGGTGATGAAAATTCTACAGTAATCGATGGTCAAAGTATATTAACAGCAACAACAACAC ] [+] EMBL CD064415 [ GCACGGTGATGAAGAGTCTGCAATGTATGAAGAAAATGTTCAAGCTGAACGGGCT AGGAGTTGTTCAGCATCAACGTGTACCTGTACGTGTTCGAGGAAAAGATCAACTTGTCAATGGTGTAGTTGAAAAACCATTCGACCATCACCAACACAGAAATGATTTAGCTAGTCATCAAATCCATACAAATGGTGTATGGTCTATTCATCAACAAAATAATCTTGTAGGTGATGAAAATTCTACAGTAATCGATGGTCAAAGTATATTAACAGCAACAACAACACGCCAAATGTCACCTGATAACTTTATGACTGGTGGAACTCATATTTTCCACTATCAAGAAATGTCTCCAGC ACAAAAATCTCT TTTAATT ACAATTAATGAAGATTTGGAAACATTACAAGCTGCTAAAGAACATTTA ] [+] EMBL CD064412 [ gcatTATGAAGAAAATGTTCAAGCTGAACGGGCT ACGA TTGTTCAGCATCAACGTG TCCTGTACGTGTTCGAGGAAAAGATCAACTTGTCAATGGTGTAGTTGAAAAACCATTCGACCATCACCAACACAGAAATGATTTAGCTAGTCATCAAATCCATACAAATGGTGTATGGTCTATTCATCAACAAAATAATCTTGTAGGTGATGAACATGCTACAGTAATCGATGGTCAAAGTATATTAACAGCAACAACAACACGCCAAATGTCACCTGATAACTTTATGACTGGTGGAACTCATATTTTCCACTATCAAGAAATGTCTCCAGC ACAAAAATCTCT TTTAATT ACCATTAATGAAGATTTGGAAACATTACAAGCTGCTAAAGAACATTTAGATATTGGTCCACCAACTGA ] [-] EMBL CD195905 [ AAC GGCTNACGA TGTTTCAGCATCAACGTGTTCCTGTTCGTGTTCGAGGAAAAGATCAACTTGTCAATGGTGTAGTTGAAAAACCATTCGACCATCACCAACACAGAAATGATTTAGCTAGTCATCAAATCCATACAAATGGTGTATGGTCTATTCATCAACAAAATAATCTTGTAGGTGATGAAAATTCTACAGTAATCGATGGTCAAAGTATATTAACAGCAACAACAACACGCCAAATGTCACCTGATAACTTTATGACTGGTGGAACTCATATTTTCCACTATCAAGAAATGTCTTCAGCGACAAAAATCTCTGTTCAATTCACAAATAAT ] [-] EMBL CD190563 [ CCACTATCAAGAAATGTCTCCAGC ACAAAAATCTCT TTTAATT ACAATTAATGAAGATTTGGAAACATTACAAGCTGCTAAAGAACATTTAGATATTGGTCCACCAACTGAACGTCACCTACTCAATGTT GGAACAGATGAAGCATCT AAACGTTGGTTAAGTGAATCTATGGGTGCCAGTCAAGCGAAGGTGACTGATGAGGTCGGTGCTATGAATGCTGCTGTAGCTCAAGCTTTACGTTCAGCTAATCGAGCTGAATCAACTGATATCAATGCTGTACAACAAGGTCAACCATTAGATCAAATACATGATCCTGGTGATGATTTGATGATGATGCAACAATCATTTCGTGTAGTTACAATTCATTTCCCTGCATTTGTTGATGATTTAAAACGTGTCGCTGTACTACGACGTGAATCTGGTGCTTTAAAAGCTGATCAAACTGGTCAACCAATTATTGCTGAGAA ] [-] EMBL CD096989 [ ataCAATGTTGGGAACAGATGAAGCATCTAAAACGTTGGTTAAGTGAATCTATGGGTGCCAGTCAAGCGAAGGTGACTGATGAGGTCGGTGCTATGAATGCTGCTGTAGCTCAAGCTTTACGTTCAGCTAATCGAGCTGAATCAACTGATATCAATGCTGTACAACAAGGTCAACCATTAGATCAAATACATGATCCTGGTGATGATTTGATGATGATGCAACAATCATTTCGTGTAGTTACAATTCATTTCCCTGCATTTGTTGATGATTTAAAACGTGTCGCTGTACTACGACGTGAATCTGGTGCTTTAAAAGCTGATCAAACTGGTCAACCAATTATTGCTGAGAAAACTGAAGGATCAACCTCATGGCCAATCACTAGTGAATTACGCGGGCCGCCCTGCCAGGT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||