These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9482#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1633 fasta sequence [TCAATAGTTTTATTTACATAACCCTATCAACAAACAAGTAACACCACGAAGACTCCAATAATTTTAAGGTGTACACCCAAGGAAGATATTCCGATCATATGAAGGTAGTTCTGCAAGTACTATATTATACAAAGATTAAAAGTGAACTCATCGTTTTTTTCTTACAATGAACTGTGATAAGATTATAGAAAACAGAAAGAAACGAAAGAAGAAAAAAATTATCCTTCAAACAATATATCCAATTTGATTAAAATCTGACTGAAATTCATTTTTATTTTGTCGAGTTGCATTTTGTTCAGCTAAATATATCATATTAGTTAAATTGACATCGTCTGGAAGTCCTGGTAGTATTGTCGGAACAAATGAAGGTGATGAGAATGGACTAAACCATCGCCATGAAAATGGTGCACCAAAAGCTTTGATAAAATTTTTTCTGGCTGATTGTTTCTCCCATGATGACTCTTCTTTTTTAATGTTTTCAATGCCTGTTTCATCATTTGAAATCGCACACAATTGACTGATGCACATAACTAAAGTAAAAATACCGAACATCAAGGATTCACATATCAATCCTAGGGCAAATGCACTGCATGCTAATGAACTAAAATTGCCTAGTATATTGAAAATTTGGTTTTGTTGACAGACATCCCAATCGGAACCCAAACATTGTAAAAGGAAATAAATACACATTCCAATAGCAGTAAATGACATAAGACAAATATAAAAAGCGAATAAAACAAAGTATTTTTGATTTCCTTCACCGACACAATTGTTTACCCATGGACAATGATGATCCATTTTACGTATACATCGTTGACAAATACGACAATGATGGGCACGAATAGGCTTAATAGTAAGGCACTTTGTGCAACGTATAGGAGGAGCAGATAAATAAGAAGAATACTGTTGTAAACATTTTGCAAATGCTTGATTTGCTGCACCGATTGGAATGCTACCTGGGTCAGTGCTGAATGCTTTGAAATGAGAAACTACTGCCAGGATAGCAAACAAATGGTAAATTGTTCCACTTATCCAGTAGAAGGTATGTGATGGTGAATGATTTAGTATTATGAAGTCTATAACAAACTCTGCATACAGAATAAGAAGCCAGGTGATAAAAATACAAGCAACCCCACAACAGTCGTTAACAAACCAGATAACACCAAATGTTCGTCTTAGAGGCCGCGAATTTACAGAGCGAGTTACAGCACGAAGACCGAAAGAACGTCTACATGGAGATAAAAAGTCGTATAAATCTCCAGAAGGACGAAATGATACACGTAATTTCCCCGCCGCTTCGTCATCCCATGAATTTAAATCTAAATCACGAATGCCACGGTATCGAGCGGGCGCTGTATTAGGATCTAAATTGATGTGGACGGTTTCTTTGTCCAATGTTTCTTGTGGATAAGACGAAACTGAGAGACCCGTTCTATAAACGGAAGGAATCGAATTCATGTTGCCATGGTCTGAAGCTTGATTGTCGGTGGTGAGTTTTCGATCTGCACTTTGTAATAACGAAGATTCCGAAGAGTTTTGACTCATATGTTGTGCTCTATAATCACGAGGGTTGCGTTATACGGCAACTAGTATTTAGAATTCATTCATCTTGAGTCAACTAATTGTACCGTAT] [+] EMBL AI067549 [TCAATAGTTTTATTTACATAACCCTATCAACAAACAAGTAACACCACGAAGACTCCAATAATTTTAAGGTGTACACCCAAGGAAGATATTCCGATCATATGAAGGTAGTTCTGCAAGTACTATATTATACAAAGATTAAAAGTGAACTCATCGTTTTTTTCTTACAATGAACTGTGATAAGATTATAGAAAACAGAAAGAAACGAAAGAAGAAAAAAATTATCCTTCAAACAATATATCCAATTTGATTAAAATCTGACTGAAATTCATTTTTATTTTGTCGAGTTGCATTTTGTTCAGCTAAATATATCATATTAGTTAAATTGACATCGTCTGGAAGTCCTGGTAGTATTGTCGGAACAAATGAAGGTGATGAGAATGGACTAAACCATCGCCATGAAAATGGTGCACCAAAAGCTTTGATAAAATTTTTTCTGGCTGATTGTTTCTCCCATGATGACTCTTCTTTTTTAATGTTTTCAATGCCTGTTTCATCATTTGAAATCGCACACAATTGACTGATGCAC ] [-] EMBL AI559036 [ GGTAGTATTGTCGGAACAAATGAAGGTGATGAGAATGGACTAAACCATCGCCATGAAAATGGTGCACCAAAAGCTTTGATAAAATTTTTTCTGGCTGATTGTTTCTCCCATGATGACTCTTCTTTTTTAATGTTTTCAATGCCTGTTTCATCATTTGAAATCGCACACAATTGACTGATGCACATAACT ] [+] EMBL CD183649 [ CGGAACAAATGAAGGTGATGAGAATGGACTAAACCATCGCCATGAAAATGGTGCACCAAAAGCTTTGATAAAATTTTTTCTGGCTGATCGTTTCTCCCATGATGACTCTTCTTTTTTAATGTTTTCAATGCCTGTTTCATCATTTGAAATCGCACACAATTGACTGATGCACATAACTAAAGTAAAAATACCGAACATCAAGGATTCACATATCAATCCTAGGGCAAATGCACTGCATGCTAATGAACTAAAATTGCCTAGTATATTGAAAATTTGGTTTTGTTGACAGACATCCCAATCGGAACCCAAACATTGTAAAAGGAAATAAATACACATTCCAATAGCAGTAAATGACATAAGACAAATATAAAAAGCGAATTAAACAAAGTATTTTTGATTTCCTTCACCGACAC ] [+] EMBL CD186895 [ GAACTAAAATTGCCTAGTACATTGAAAATTTGGTTTTGTTGACAGACATCCCAATCGGAACCCAAACATTGTAAAAGGAAATAAATACACATTCCAATAGCAGTAAATGACATAAGACAAATATNAAAAGCGAATAAAACAAAGTATTTTTGATTTCCTTCACCGACACAATTGTTTACCCATGGACAATGATGATCCATTTTACGTATACATCGTTGACAAATACGACAATGATGGGCACGAATAGGCTTAATAGTAAGGCACTTTGTGCAACGTATAGGAGGAGCAGATAAATAAGAAGAATACTGTTGTAAACATTTTGCAAATGCTTGATTTGCTGCACCGATTGGAATG ] [-] EMBL CD187806 [ AAATTTGGTTTTGTTGACAGACATCCCAATCGGAACCCAAACA TGTAAAAGGAAATAAATACACATTCCAATAGCAGTAAATGACATAAGACAAATATAAAAAGCGAATAAAACAAAGTATTTTTGATTTCCTTCACCGACACAATTGTTTACCCATGGACAATGATGATCCATTTTACGTATACATCGTTGACAAATACGACAATGATGGGCACGAATAGGCTTAATAGTAAGGCACTTTGTGCAACGTATAGGAGGAGCAGATAAATAAGAAGAATACTGTTGTAAACATTTTGCAAATGCTTGATTTGCTGCACCGATTGGAATGCTACCTGGGTCAGT ] [-] EMBL CD150545 [ TGCAAATGCTTGATTTGCTGCACCGATTGGAATGCTACCTGGGTCAGTGCTGAATGCTTTGAAATGAGAAACTACTGCCAGGATAGCAAACAAATGGTAAATTGTTCCACTTATCCAGTAGAAGGTATGTGATGGTGAATGATTTAGTATTATGAAGTCTATAACAAACTCTGCATACAGAATAAGAAGCCAGGTGATAAAAATACAAGCAACCCCACAACAGTCGTTAACAAACCAGATAACACCAAATGTTCGTCTTAGAGGCCGCGAATTTACAGAGCGAGTTACAGCACGAAGACCGAAAGAACGTCTACATGGAGATAAAAAGTCGTATAAATCTCCAGAAGGACGAAATGATACACGTAATTTCCCCGCCGCTTCGTCATCCCATGAATTTAAATCTAAATCACGAATGCCACGGTATCGAGCGGGCGCTGTATTAGGATCTAAATTGATGTGGACGGTTTCTTTGTCCAATGTTTCTTGTGGATAAGACGAAACTGCGAGACCCGTTact ] [-] EMBL CD150544 [ gcAATGCTTGATTTGCTGCACCGATTGG NTGCTACCTGGGTCAGTGCTGAATGCTTTGAAATGAGAAACTACTGCCAGGATAGCAAACAAATGGTAAATTGTTCCACTTATCCAGTAGAAGGTATGTGATGGTGAATGATTTAGTATTATGAAGTCTATAACAAACTCTGCATACAGAATAAGAAGCCAGGTGATAAAAATACAAGCAACCCCACAACAGTCGTTAACAAACCAGATAACACCAAATGTTCGTCTTAGAGGCCGCGAATTTACAGAGCGAGTTACAGCACGAAGACCGAAAGAACGTCTACATGGAGATAAAAAGTCGTATAAATCTCCAGAAGGACGAAATGATACACGTAATTTCCCCGCCGCTTCGTCATCCCATGAATTTAAATCTAAATCACGAATGCCACGGTATCGAGCGGGCGCTGTATTAGGATCTAAATTGATGTGGACGGTTTCTTTGTCCAATGTTTCTTGTGGATAAGACGAAACTGAGAGACCCGTTCTA ] [-] EMBL CD147454 [ ATACAAGCAACCCCACAACAGTCGTTAACAAACCAGATAACACCAAATGTTCGTCTTAGAGGCCGCGAATTTACAGAGCGAGTTACAGCACGAAGACCGAAAGAACGTCTACATGGAGATAAGAAGTCGTATAAATCTCCAGAAGGACGAAATGATACACGTAATTTCCCCGCCGCTTCGTCATCCCACGAATTTAAATCTAAATCACGAATGCCACGGTATCGAGCGGGCGCTGTATTAGGATCTAAATTGATGTGGACGGTTTCTTTGTTCAATGTTTCTTGTGGATAAGACGAAACTGAGAGACCCTTTCTATAAACGGAAGGAATC ] [+] EMBL CD064762 [ AAGCAACCCCACAACAGTCGTTAACAAACCAGATAACACCAAATGTTCGTCTTAGAGGCCGCGAATTTACAGAGCGAGTTACAGCACGAAGACCGAAAGAACGTCTACATGGAGATAAAAAGTCGTATAAATCTCCAGAAGGACGAAATGATACACGTAATTTCCCCGCCGCTTCGTCATCCCACGAATTTAAATCTAAATCACGAATGCCACGGTATCGAGCGGGCGCTGTATTAGGATCTAAATTGATGTGGACGGTTTCTTTGTTCAATGTTTCTTGTGGATAAGACGAAACTGAGAGACCCTTTCTATAAACGGAAGGAATCGAATTCATGTTGCCATGGTCTGAAGCTTGATTGTCGGTGGTGAGTTTTCGATCTGCACTTTGTAATAACGAAGATTCCGAAGAGTTTTGACTCATATGTTGTGCTCTATAATCACGAGGGTTGCGTTATACGGCAACTAGTATTTAGAATTCATTCATCTTGAGTCAACTAATTGTACCGTAT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||