| These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_9489#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 865 fasta sequence 
                              [CCTCGGTACGAGGACCACACTTCCGATGGTTAAGATTACGAAGTTGGTTGTTTGTGGACCGACTGGTTCCGGGAAAACTTCTCTGATTGAACACTGTATATATGGGAACTATTTTGAAAGGCAACCAGATGACTTTATTTCGACTTATGAAGACACGTATAATGCTGTTGTCGAGACAGATCGTGGTTCTAAAGAAAAAGTTCGAATTTACGATCTTGGAGGGATGACTAAATTGGAAAAACATTTTGTGAATTGTGCTGATGCATTCATTTTGGTATATGATATAAGCGATTCCAAATCTTTCAGCTCTGTTCAAAGTCTAAAACAAGACATTGACAAATATCGCGAGAAACGTG-ATTTATGCATTGT-AC-TTAGCTGTCACAAGGTTGATAAACCTAAAGATGCAACTTTAGATTCTGCAGAAATTTCTCGATGG-TC-TCAATCCGAGAAAGTGGCAAATATATTTGAAACAACTGTGTATGACCGCCAATCACTCATGAATCTATTCACGTGGACTGTTTCCCGTATCACTCAGTCTCAAAGTAAATCAGGATTTTCATTCGGTAAAAAGGATGTTCGGTGAAAGAAGAACTCTCAACGAACTCAAAGAAATTGCAAGCATCATTA-TTATGTGATGG-AAAATTTTAAAAAGAAACATATTCTCTCCCATATATATA-TTGAAATACAAAACAACTAAATT-GTAAAGAAAGCTCA-TTGTTTCCAACCATCTGTTTATGACTAACCTTTTGAATACTATTATTGTTATTATTAT-TATTATTACTGAAT-AGAATAATCTC-TTATTATTATTA-TGACTAACCTTAACCTAAGTAAAATTTGCCACTTTTTTTT-TCTCCCTGGGTAATAA]
[+] EMBL CD082350             [CCTCGGTACGAGGACCACACTTCCGATGGTTAAGATTACGAAGTTGTTTGTTTGTGGACCGACTGGTTCCGGGAAAACTTCTCTGATTGAACACTGTATATATGGGAACTATTTTGAAAGGCAACCAGATGACTTTATTTCGACTTATGAAGACACGTATAATGCTGTTGTCGAGACAGATCGTGGTTCTAAAGAAAAAGTTCGAATTTACGATCTTGGAGGGATGACTAAATTGGAAAAACATTTTGTGAATTGTGCTGATGCATTCATTTTGGTATATGATATAAGCGATTCCAAATCTTTCAGCTCTGTTCAAAGTCTAAAACAAGACATTGACAAATATCGCGAGAAACGTG ATTTATGCATTGT AC TTAGCTGTCACAAGGTTGATAAACCTAAAGATGCAACTTTAGATTCTGCAGAAATTTCTCGATGG TC TCAATCCGAGAAAGTGGCAAATATATTTGAAACAACTGTGTATGACCGCCAATCACTCATGAATCTATTCACGTGGACTGTTTCCCGTATCACTCAGTCTCAAAGT AATCAGGATTTTCATTCGGTAAAAg                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD082485             [             cCCACACTTCCGATGGTTAAGATTACGAAGTTGGTTGTTTGTGGACCGACTGGTTCCGGGAAAACTTCTCTGATTGAACACTGTATATATGGGAACTATTTTGAAAGGCAACCAGATGACTTTATTTCGACTTATGAAGACACGTATAATGCTGTTGTCGAGACAGATCGTGGTTCTAAAGAAAAAGTTCGAATTTACGATCTTGGAGGGATGACTAAATTGGAAAAACATTTTGTGAATTGTGCTGATGCATTCATTTTGGTATATGATATAAGCGATTCCAAATCTTTCAGCTCTGTTCAAAGTCTAAAACAAGACATTGACAAATATCGCGAGAAACGTG ATTTATGCATTGT AC TTAGCTGTCACAAGGTTGATAAACCTAAAGATGCAACTTTAGATTCTGCAGAAATTTCTCGATGG TC TCAATCCGAGAAAGTGGCAAATATATTTGAAACAACTGTGTATGACCGCCAATCACTCATGAATCTATTCACGTGGACTGTTTCCCGTATCACTCAGTCTCAAAGTAAATCAGGATTTTCATTCGGTAAAAAGGATGTTCGGTGAAAGAAGAACTCTCAACGAACTCAAAGAAATTGGCAGCATCATTA TTATGTGATGG GAAATTTNTAAAAGAAACATATTCTCT CCATATATATA  TG AATAC ANAC ACTAAATT GT AAG AAGCTCA TTGTTNC  ACCATCTG TTATGACT ACCTTTTTGATACTA TATGGTANTTA TA  TA TA TACTG AT AGAAT ATCTC  TATTA TA TA TGACT ACCTTNA CT AGT AAATTTG                             ]
[+] EMBL CD079368             [                      CCGATGGTTAAGATTACGAAGTTGGTTGTTTGTGGACCGACTGGTTCCGGGAAAACTTCTCTGATTGAACACTGTATATATGGGAACTATTTTGAAAGGCAACCAGATGACTTTATTTCGACTTATGAAGACACGTATAATGCTGTTGTCGAGACAGATCGTGGTTCTAAAGAAAAAGTTCGAATTTACGATCTTGGAGGGATGACTAAATTGGAAAAACATTTTGTGAATTGTGCTGATGCATTCATTTTGGTATATGATATAAGCGATTCCAAATCTTTCAGCTCTGTTCAAAGTCTAAAACAAGACATTGACAAATATCG GA AAACGGGTGTTTA GCGTTTTCTCTTTCCCTGNCNCAAGGTTGATAAACCTAAAGATGCAACTTTAGATTCTGCAG AATTT TCGATGGTTCATCCGCCCGAGAAAGTGGCAAATATATTTGAAACAACTGTGTATGACCGCCAATCACTCATGAATCTATTCACGTGGACTGTTTCCCGTATCACTCAGTCTCAAAGTAAATCAGGATTTTCATTCGGT AAAAGGATGTTCGGTGAAAG AGAACTCTCACCGAACTCAAAGAAATTGCAAGCATCATTATTTATGTGATGGAAAAATTTTAAAAAGAAACATATTCTCTCCCATATATTTATTTGAAATACAAAACACCTAAATTGGTAAAGAAAGCTTATTTGTTTCCAACCATCTGTTAATGACTAACCTTTTGAAAACTATTAATGGTAATAATATATATTATTACCGGATAAGAA AATCCCTTTATATTTATTA TGACCAACCTTACCC  AGAAAAATTTGGCCCTTTTTTTT TCTCCCTGGGTAA   ]
[-] EMBL CD073645             [                                                                                                                                                                                                                            GGGATGACTAAATTGGAAAAACATTTTGTGAATTGTGCTGATGCATTCATTNTGGTATATGATATAAGCGATTCCAAATCTTTCAGCTCTGTTCAAAGTCTAAAACAAGACATTGACAAATATCGCGAGAAACGTG ATTTATGCATTGT AC TTAGCTGTCACAAGGTTGATAAACCTAAAGATGCAACTTTAGATTCTGCAGAAATTTCTCGATGG TC TCAATCCGAGAAAGTGGCAAATATATTTGAAACAACTGTGTATGACCGCCAATCACTCATGAATCTATTCACGTGGACTGTTTCCCGTATCACTCAGTCTCAAAGTAAATCAGGATTTTCATTCGGTAAAAAGGATGTTCGGTGAAAGAAGAACTCTCAACGAACTCAAAGAAATTGCAAGCATCATTA TTATGTGATGG AAAATTTTAAAAAGAAACATATTCTCTCCCATATATATA TTGAAATACAAAACAACTAAATT GTAAAGAAAGCTCA TTGTTTCCAACCATCTGTTTATGACTAACCTTTTGAATACTATTATTGTTATTATTAT TATTATTACTGAAT AGAATAATCTC TTATTATTATTA TGACTAACCTTAACCTAAGTAAAATTTGCCACTTTTTTTTCATTCCATGTATAATAA]
[-] EMBL CD076082             [                                                                                                                                                                                                                                   CTAAATTGGAAAAACATTTTGTGAATTGTGCTGATGCATTCATTTTGGTATATGATATAAGCGATTCCAAATCTTTCAGCTCTGTTCAAAGTCTAAAACAAGACATTGACAAATATCGCGAGAAACGTG ATTTATGCATTGT AC TTAGCTGTCACAAGGTTGATAAACCTAAAGATGCAACTTTAGATTCTGCAGAAATTTCTCGATGG TC TCAATCCGAGAAAGTGGCAAATATATTTGAAACAACTGTGTATGACCGCCAATCACTCATGAATCTATTCACGTGGACTGTTTCCCGTATCACTCAGTCTCAAAGTAAATCAGGATTTTCATTCGGTAAAAAGGATGTTCGGTGAAAGAAGAACTCTCAACGAACTCAAAGAAATTGCAAGCATCATTA TTATGTGATGG AAAATTTTAAAAAGAAACATATTCTCTCCCATATATATA TTGAAATACAAAACAACTAAATT GTAAAGAAAGCTCA TTGTTTCCAACCATCTGTTTATGACTAACCTTTTGAATACTATTATTGTTATTATTAT TATTATTACTGAAT AGAATAATCTC TTATTATTATTA TGACTAACCTTAACCTAAGTAAAATTTGCCAC                         ]
[-] EMBL CD075950             [                                                                                                                                                                                                                                                                                                                                                                           GCATTGT AC TTAGCTGTCACAAGGTTGATAAACCTAAAGATGCAACTTTAGATTCTGCAGAAATTTCTCGATGG TC TCAATCCGAGAAAGTGGCAAATATATTTGAAACAACTGTGTATGACCGCCAATCACTCATGAATCTATTCACGTGGACTGTTTCCCGTATCACTCAGTCTCAAAGTAAATCAGGATTTTCATTCGGTAAAAAGGATGTTCGGTGAAAGAAGAACTCTCAACGAACTCAAAGAAATTGCAAGCATCATTA TTATGTGATGG AAAATTTTAAAAAGAAACATATTCTCTCCCATATATATA TTGAAATACAAAACAACTAAATT GTAAAGAAAGCTCA TTGTTTCCAACCATCTGTTTATGACTAACCTTTTGAATACTATTATTGTTATTATTAT TATTATTACTGAAT AGAATAATCTC TTATTATTATTAGTGACTAACCTTAACCTAAGTAAAATTTGCCAC                         ]
consensusID : consensus_9489#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 443 fasta sequence 
                              [AATCAATGTTTTATGAATATTATCTTTAAATAGTGAGAGTTCCTTTCTAATTTCCTTGTCATGTATACATATGATGATCATTTACTTAAGAATATACTTTGATTACCAGATTTCGACTTATGAAGACACGTATAATGCTGTTGTCGAGACAGATCGTGGTTCTAAAGAAAAAGTTCGAATTTACGATCTTGGAGGGATGACTAAATTGGAAAAACATTTTGTGAATTGTGCTGATGCATTCATTTTGGTATATGATATAAGCGATTCCAAATCTTTCAGCTCTGTTCAAAGTCTAAAACAAGACATTGACAAATATCGCGAGAAACGTGATTTATGCATTGTACTTAGCTGTCACAAGGTTGATAAACCTAAAGATGCAACTTTAGATTCTGCAGAAATTTCTCGATGGTCTCAATCCGAGAAAGTGGCANATATATTTGAAA]
[+] EMBL CD090972             [AATCAATGTTTTATGAATATTATCTTTAAATAGTGAGAGTTCCTTTCTAATTTCCTTGTCATGTATACATATGATGATCATTTACTTAAGAATATACTTTGATTACCAGATTTCGACTTATGAAGACACGTATAATGCTGTTGTCGAGACAGATCGTGGTTCTAAAGAAAAAGTTCGAATTTACGATCTTGGAGGGATGACTAAATTGGAAAAACATTTTGTGAATTGTGCTGATGCATTCATTTTGGTATATGATATAAGCGATTCCAAATCTTTCAGCTCTGTTCAAAGTCTAAAACAAGACATTGACAAATATCGCGAGAAACGTGATTTATGCATTGTACTTAGCTGTCACAAGGTTGATAAACCTAAAGATGCAACTTTAGATTCTGCAGAAATTTCTCGATGGTCTCAATCCGAGAAAGTGGCANATATATTTGAAA]
[-] EMBL CD167752             [                                                                                           ATATACTTTGATTACCAGATTTCGACTTATGAAGACACGTATAATGCTGTTGTCGAGACAGATCGTGGTTCTAAAGAAAAAGTTCGAATTTACGATCTTGGAGGGATGACTAAATTGGAAAAACATTTTGTGAATTGTGCTGATGTATTCATTTTGGTATATGATATAAGCGATTCCAAATCTTTCAGCTCTGTTCAAAGTCTAAAACAAGACATTGACAAAT                                                                                                                                 ]
consensusID : consensus_9489#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 350 fasta sequence 
                              [CCTGTTTAACCCACACTTCCGATGGTTAAGATTACGAAGTTGGTTGTTTGTGGACCGACTGGTTCCGGGAAAACTTCTCTGATTGAACACTGTATATATGGGAACTATTTTGAAAGGCAACCAGATGACTTTGCAAGTCATTTCGTTATACTAGCATTCTTATTTTTTAAACCTTGATGCCGTTTTCTTATGCAACAGACTTCATTGTCGACAATCAATCTCAGGATAAGTGTATGGTGACTGTTAAGAGCTTCAACTTGTTTCTTAATGTAGTTGATCTGGAAATAAAATACACCACACTAGTTGATCACTAGTTGATTCAAGTTAACAGCAACCAAGCGACTGAACTA]
[+] EMBL CD178898             [CCTGTTTAACCCACACTTCCGATGGTTAAGATTACGAAGTTGGTTGTTTGTGGACCGACTGGTTCCGGGAAAACTTCTCTGATTGAACACTGTATATATGGGAACTATTTTGAAAGGCAACCAGATGACTTTGCAAGTCATTTCGTTATACTAGCATTCTTATTTTTTAAACCTTGATGCCGTTTTCTTATGCAACAGACTTCATTGTCGACAATCAATCTCAGGATAAGTGTATGGTGACTGTTAAGAGCTTCAACTTGTTTCTTAATGTAGTTGATCTGGAAATAAAATACACCACACTAGTTGATCACTAGTTGATTCAAGTTAACAGCAACCAAGCGACTGAACTA]
[+] EMBL CD188392             [                     ATGGTTAAGATTACGAAGTTGGTTGTTTGTGGACCGACTGGTTCCGGGAAAACTTCTCTGATTGAACACTGTATATATGGGAACTATTTTGAAAGGCAACCAGATGACTTTGCAAGTCATTTCGTTATACTAGCATTCTTATTTTTTAAACCTTGATGCCGTTTTCTTATGCAACAGACTTCATTGTCGACCATCAATCTCAGGATAAGTGTATGGT                                                                                                                ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9489#0      CCTCGGTACGAGGACCACACTTCCGATGGTTAAGATTACGAAGTTGGTTGTTTGTGGACC 60
consensus_9489#1      ---------------------------AATCAATGTTTTATGAATA-TTATCTTTAAATA 32
consensus_9489#2      ------------------------------------------------------------
                                                                                  
consensus_9489#0      GACTG-GTTCCGGGAAAACTTCTCTGAT-TGAACACTGTATATATGGGAACTATTTTGAA 118
consensus_9489#1      GTGAGAGTTCCTTTCTAATTTCCTTGTCATGTATAC-ATATGATGATCATTTACTTAAGA 91
consensus_9489#2      ------------------------------------------------------------
                                                                                  
consensus_9489#0      AGGCAACCAGATGA--CTTTATTTCGACTTATGAAGAC-ACGTATAATGCTGTTGTCGAG 175
consensus_9489#1      ATATACTTTGATTA--CCAGATTTCGACTTATGAAGAC-ACGTATAATGCTGTTGTCGAG 148
consensus_9489#2      ------CCTGTTTAACCCACACTTCCGATGGTTAAGATTACGAAGTTGGTTGTTTGTG-G 53
                               * * *  *   * ***   *  * ****  *** *    * ****   * *
consensus_9489#0      ACAGATCGTGGTTCTAAAGAAAAAGTTCGAATTTACGATCTTGGAGGGATGACTAAATTG 235
consensus_9489#1      ACAGATCGTGGTTCTAAAGAAAAAGTTCGAATTTACGATCTTGGAGGGATGACTAAATTG 208
consensus_9489#2      ACCGAC--TGGTTCCGGGAAAACTTCTCTGATTGAACACTGTATATATGGGAACTATTTT 111
                      ** **   ******     ***    **  *** *  *   *  *     **   * ** 
consensus_9489#0      GAAAAACATTTTGTGAATTGTGCTGATGCATTCATTTTGGTATATGATATAAGCGATTCC 295
consensus_9489#1      GAAAAACATTTTGTGAATTGTGCTGATGCATTCATTTTGGTATATGATATAAGCGATTCC 268
consensus_9489#2      GAAAGGCAACCAGATGACTTTGCAAGTCATTTCGTTATACTA-GCATTCTTATT--TTTT 168
                      ****  **    *   * * ***   *   *** ** *  **     * * *    **  
consensus_9489#0      AAATCTTTCAGCTCTGTTCAAAGTC--TAAAACAAGACATTGACAAATA-TCGCGAGAAA 352
consensus_9489#1      AAATCTTTCAGCTCTGTTCAAAGTC--TAAAACAAGACATTGACAAATA-TCGCGAGAAA 325
consensus_9489#2      AAACCTTGATGCCGTTTTCTTATGCAACAGACTTCATTGTCGACAATCAATCTCAGGATA 228
                      *** ***   **  * ***  *  *   * *        * *****  * ** *  ** *
consensus_9489#0      CGTGATTTATGCATTGTACTTAGCTGTCACAAGGTTGATAAACCTAAAGATGCAACTTTA 412
consensus_9489#1      CGTGATTTATGCATTGTACTTAGCTGTCACAAGGTTGATAAACCTAAAGATGCAACTTTA 385
consensus_9489#2      AGTGTATGGTG-ACTGTTAAGAGCTTCAACTTGTTTCTTAATGTAGTTGATCTGGAAATA 287
                       ***  *  ** * ***    ****   **  * **  ***       ***       **
consensus_9489#0      GATT---CTGCAGAAATTTCTCGATGGTCTCAATCCGAGAAAGTGGCAAATATAT--TTG 467
consensus_9489#1      GATT---CTGCAGAAATTTCTCGATGGTCTCAATCCGAGAAAGTGGCANATATAT--TTG 440
consensus_9489#2      AAATACACCACACTAGTTGATCACTAGTT--GATTCAAGTTAACAGCAACCAAGCGACTG 345
                       * *   *  **  * **  **  * **    ** * **  *   ***   *      **
consensus_9489#0      AAACAACTGTGTATGACCGCCAATCACTCATGAATCTATTCACGTGGACTGTTTCCCGTA 527
consensus_9489#1      AAA--------------------------------------------------------- 443
consensus_9489#2      AACTA------------------------------------------------------- 350
                      **                                                          
consensus_9489#0      TCACTCAGTCTCAAAGTAAATCAGGATTTTCATTCGGTAAAAAGGATGTTCGGTGAAAGA 587
consensus_9489#1      ------------------------------------------------------------
consensus_9489#2      ------------------------------------------------------------
                                                                                  
consensus_9489#0      AGAACTCTCAACGAACTCAAAGAAATTGCAAGCATCATTATTATGTGATGGAAAATTTTA 647
consensus_9489#1      ------------------------------------------------------------
consensus_9489#2      ------------------------------------------------------------
                                                                                  
consensus_9489#0      AAAAGAAACATATTCTCTCCCATATATATATTGAAATACAAAACAACTAAATTGTAAAGA 707
consensus_9489#1      ------------------------------------------------------------
consensus_9489#2      ------------------------------------------------------------
                                                                                  
consensus_9489#0      AAGCTCATTGTTTCCAACCATCTGTTTATGACTAACCTTTTGAATACTATTATTGTTATT 767
consensus_9489#1      ------------------------------------------------------------
consensus_9489#2      ------------------------------------------------------------
                                                                                  
consensus_9489#0      ATTATTATTATTACTGAATAGAATAATCTCTTATTATTATTATGACTAACCTTAACCTAA 827
consensus_9489#1      ------------------------------------------------------------
consensus_9489#2      ------------------------------------------------------------
                                                                                  
consensus_9489#0      GTAAAATTTGCCACTTTTTTTTTCTCCCTGGGTAATAA 865
consensus_9489#1      --------------------------------------
consensus_9489#2      --------------------------------------
                                                            
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||