These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9522#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1049 fasta sequence [GCTTACGCTTCTTTAACTTGNCCAGTGGTTTCTAAAAGTAACATTCGGACATTAAAAAGGGGATCCACCCAACAATAGCTTCTTAACATCAGGCAAATTTATTGATGTGTCCTGTTACATGTGTTTCTCATTTGTATGGATAGTCCATTTCATCCATTTTATTAACACTTTTCTATGCTGTTTGCAAGTAAATAATTTTATGGATAAACATTCTTATCCATTTTCTCAGTTACAATAAATGAATGCCCTAAAGAAGCATGCCCATTTAAACTCTTTATACTTACAATAATCTATTTTCTGTGATACATTTATAATTCTTGCAATTGAATGCTAAAGCGCAAAGCGGTCAGACGCTGTTCTGCACATTATTATGTGACTGCTGAAGATCATGTGGAAAACGAAGTAAAACACGAAAAGCTTTTAACAGAAACTTCTCGATTGTCATCTTCATGGGCTGGTCTGAGTGTCTCATGTAGTGAATCTAGCGATAGAGACTGTTCATCGTCTTCTACATCTGTGAACAGCAGCCCTAATCATCGTCCAAGTTCTTTCAGTGGACCTCTGGTGATTTCCGTCACTTGTTCTTACCCTATCTGTCCCGGGGTTAACAACTGTGGTTCTTCTGTTGCCACTGGTTCTGGTAAGGGTATGCCTTCAAGTCCTCCTCATTTTTCTCGATCATCTTCT-TGCTATCCGTCACCCGTTGCATCACCTGTCTCTTCACGCGTTCAGTGTTATTCACCTTCTTTACCAACCTCAACCGTTTCTCCCAATCCCCGTCGTTTTAGCAATACCGGTGGTGCAAGTCCTTTGCTTGTTTCAGCTGCGCTTGGACGCAAACGAGGATATTTGTCTTGTGTGTCTGGGGGTGCAGGTTCCAGTGATGATGCTAGTCGTGAGGGATCACCAGAATCTTCGTGTTGTCATAGAAATAACAAATCTTCATGTCAAAATGATGTTCGGATGTGTAGCAATGGAACAAATCCATATTCTGAATTTCCCTATTT-CCGTTGGCCACCGAGTTTACCTGTAGTATCAAGTCCTTCTAG] [+] EMBL CD079843 [GCTTACGCTTCTTTAACTTGNCCAGTGGTTTCTAAAAGTAACATTCGGACATTAAAAAGGGGATCCACCCAACAATAGCTTCTTAACATCAGGCAAATTTATTGATGTGTCCTGTTACATGTGTTTCTCATTTGTATGGATAGTCCATTTCATCCATTTTATTAACACTTTTCTATGCTGTTTGCAAGTAAATAATTTTATGGATAAACATTCTTATCCATTTTCTCAGTTACAATAAATGAATGCCCTAAAGAAGCATGCCCATTTAAACTCTTTATACTTACAATAATCTATTTTCTGTGATACATTTATAATTCTTGCAATTGAATGCTAAAGCGCAAAGCGGTCAGACGTTGTTCTGCACATTATTATGTGACTGCTGAAGATCATGTGGAAAACGAAGTAAAACACGAAAAGCTTTTAACAGAAACTTCTCGATTGTCATCTTCATGGGCTGGTCTGAGTGTCTCATGTAGTGAATCTAGCGATAGAGACTGTTCATCGTCTTCTACATCTGTGAACAGCAGCCCTAATCATCGTCCAAGTTCTTTCAGTGGACCTCTGGTGATTTCCGTCACTTGTTCTTACCCTATCTGTCCCGGNGTTAACAACTGTGGTTCTTCTGTTGCCACTGGTTCTGGTAAGGGTATGCCTTCAAGTCCTCCTCATTTTT ] [+] EMBL CD152220 [ GGGGATCCACCCAACAATAGCTTCTTAACATCAGGCAAATTTATTGATGTGTCCTGTTACATGTGTTTCTCATTTGTATGGATAGTCCATTTCATCCATTTTATTAACACTTTTCTATGCTGTTTGCAAGTAAATAATTTTATGGATAAACATTCTTATCCATTTTCTCAGTTACAATAAATGAATGCCCTAAAGAAGCATGCCCATTTAAACTCTTTATACTTACAATAATCTATTTTCTGTGATACATTTATAATTCTTGCAATTGAATGCTAAAGCGCAAAGCGGTCAGACGCTGTTCTGCACATTATTATGTGACTGCTGAAGATCATGTGGAAAACGAAGTAAAACACGAAAAGCTTTTAACAGAAACTTCTCGATTGTCATCTTCATGGGCTGGTCTGA ] [-] EMBL CD152251 [ AACACTTTTCTATGCTGTTTGCAAGTAAATAATTTTATGGATAAACATTCGTATCCATTTTCTCAGTTACAATAAATGAATGCCCTAAAGAAGCATGCCCATGTAAACTCTTTATACTTACAATAATCTATTTTCTGTGATACATTTATAATTCTTGCAATTGAATGCTAAAGCGCAAAGCGGTCAGACGCTGTTCTGCACATTATTATGTGACTGCTGAAGATCATGTGGAAAACGAAGTAAAACACGAAAAGCTTTTAACAGAAACTTCTCGATTGTCATCTTCATGGGCTGGTCTGAGTGTCTCATGTAGTGAATCTAGCGATAGAGACTGTTCATCGTCTTCTACATCTGTGAACAGCAGCCCTAATCATCGTCCAAGTTCTTTCAGTGGACCTCTGGTGATTTCCGTCACTTGTTCTTACCCTATCTGTCCCGGGGTTAACAACTGTGGTTCTTCTGTTGCCACTGGTTCTGGTAAGGGTATGCC ] [-] EMBL CD152340 [ ATTTTCTCAGTTACAATAAATGAATGCCCTAAAGAAGCATGCCCATTTAAACTCTTTATACTTACAATAATCTATTTTCTGTGATACATTTATAATTCTTGCAATTGAATGCTAAAGCGCAAAGCGGTCAGACGCTGTTCTGCACATTATTATGTGACTGCTGAAGATCATGTGGAAAACGAAGTAAAACACGAAAAGCTTTTAACAGAAACTTCTCGATTGTCATCTTCATGGGCTGGTCTGAGTGTCTCATGTAGTGAATCTAGCGATAGAGACTGTTCATCGTCTTCTACATCTGTGAACAGCAGCCCTAATCATCGTCCAAGTTCTTTCAGTGGACCTCTGGTGATTTCCGTCACTTGTTCTTACCCTATCTGTCCCGGGGTTAACAACTGTGGTTCTTCTGTTGCCACTGGTTCTGGTAAGGGTATGCC ] [+] EMBL CD091474 [ TTCTTGCAATTGAATGCTAAAGCGCAAAGCGGTCAAACGCTGTTCTGCACATTATTATGTGACTGCTGAAGATCATGTGGAAAACGAAGTAAAACACGAAAAGCTTTTAACAGAAACTTCTCGATTGTCATCTTCATGGGCTGGTCTGAGTGTCTCATGTAGTGAATCTAGCGATAGAGACTGTTCATCGTCTTCTACATCTGTGAACAGCAGCCCTAATCATCGTCCAAGTTCTTTCAGTGGACCTCTGGTGATTTCCGTCACTTGTTCTTACCCTATCTGTCCCGGGGTTAACAACTGTGGTTCTTCTGTTGCCACTGGTTCTGGTAAGGGTATGCCTTCAAGTCCTCCTCATTTTTCTCGATCATCTTCT TGCTATCCGTCACCCGTTGCATCACCTGTCTCTTCACGCGTTCA ] [-] EMBL CD121263 [ cCAATTGAATGCTAAAGCGCAAAGCGGTCAGACGTTGTTCTGCACATTATTATGTGACTGCTGAAGATCATGTGGAAAACGAAGTAAAACACGAAAAGCTTTTAACAGAAACTTCTCGATTGTCATCTTCATGGGCTGGTCTGAGTGTCTCATGTAGTGAATCTAGCGATAGAGACTGTTCATCGTCTTCTACATCTGTGAACAGCAGCCCTAATCATCGTCCAAGTTCTTTCAGTGGACCTCTGGTGATTTCCGTCACTTGTTCTTACCCTATCTGTCCCGGGGTTAACAACTGTGGTTCTTCTGTTGCCACTGGTTCTGGTAAGGGTATGCCTTCAAGTCCTCCTCATTTTTCTCGATCATCTTCT TGCTATCCGTCACCCGTTGCATCACCTGTCTCTTCACGCGTTCAGTGTTATTCACCTTCTTTACCAACCTCAACCGTTTCTCCCAATCCCCGTCGTTTTAGCAATACCGGTGGTGCAAGTCCTTTGCTTGTTTCAGCTGCGCTTGGACGCAAACGAGGATATT ] [+] EMBL CD179158 [ CATCTGTGAACAGCAGCCCTAATCATCGTCCAAGTTCTTTCAGTGGACCTCTGGTGATTTCCGTCACTTGTTCTTACCCTATCTGTCCCGGGGTTAACAACTGTGGTTCTTCTGTTGCCACTGGTTCTGGTAAGGGTATGCCTTCAAGTCCTCCTCATTTTTCTCGATCATCTTCT TGCTATCCGTCACCCGTTGCATCACCTGTCTCTTCACGCGTTCAGTGTTATTCACCTTCTTTACCAACCTCAACCGTTTCTCCCAATCCCCGTCGTTTTAGCAATACCGGTGGTGCAAGTCCTTTGCTTGTTTCAGCTGCGCTTGGACGCAAACGAAGATATTTGTCTTGTGTGTCTGGGGGTGCAGGTTCCAGTGATGATGCTAGTCGTGAGGGATCACC ] [+] EMBL CD071538 [ AGCCCTAATCATCGTCCAAGTTCTTTCAGTGGACCTCTGGTGATTTCCGTCACTTGTTCTTACCCTATCTGTCCCGGGGTTAACAACTGTGGTTCTTCTGTTGCCACTGGTTCTGGTAAGGGTATGCCTTCAAGTCCTCCTCATTTTTCTCGATCATCTTCT TGCTATCCGCCACCCGTTGCATCACCTGTCTCTTCACGCGTTCAGTGTTATTCACCTTCTTTACCAACCTCAACCGTTTCTCCCAATCCCCGTCGTTTTAGCAATACCGGTGGTGCAAGTCCTTTGCTTGTTTCAGCTGCGCTTGGACGCAAACGAGGATATTTGTCTTGTGTGTCTGGGGGTGCAGGTTCCAGTGATGATGCTAGTCGTGAGGGATCACCAGAATCTTCGTGTTGTCATAGAAATAACAAATCTTCATGTCAAAATGATGTTCGGATGTGTAGCAATGGAACAAATCCATATTCTGAATTTCCCTATTT CCGTTGGCCACCGAGTTTACCTGTAGT ] [-] EMBL CD068120 [ TTCAAGTCCTCCTCATTTTTCTCGATCATCTTCTGTGCTATCCGTCACCCGTTGCATCACCTGTCTCTTCACGCGTTCAGTGTTATTCACCTTCTTTACCGACCTCAACCGTTTCTCCCGATCCCCGTCGTTTTAGCAATACCGGTGGTGCAAGTCCTTTGCTTGTTTCAGCTGCGCTTGGACGCAAACGAGGATATTTGTCTTGTGTGTCTGGGGGTGCAGGTTCCAGTGATGATGCTAGTCGTGAGGGATCACCAGAATCTTCGTGTTGTCATAGAAATAACAAATCTTCATGTCAAAATGATGTTCGGATGTGTAGCAATGGAACAAATCCATATTCTGAATTTCCCTATTTGCCGTT GCC CCGAG TTACCTG ] [+] EMBL BG932698 [ CAAATTTTCATGTCAAAATGATGTTCGGATGTGTAGCAATGGAACAAATCCATATTCTGAATTTCCCTATTT CCGTTGGCCACCGAGTTTACCTGTAGTATCAAGTCCTTCTAG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||