These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9530#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1636 fasta sequence [GCATGCTATGACCACGTCTCGTCCTGTGCGTATTTGTCCATCAACCTGCAGTTTAACTCGTGAACGAGCCTGTTGACTGGTTAGGGATTGATGAGTCTCTGCAATACCCAATTCCCATGGAAGTCCAGCATGTTTGATTCCTGTCCAACTACTAGCACCAGTACCACCATCATGACCAGAAATTGTTATATGTGATGCGCGAGCCTTTGCCACACCAGCAGCAACGATACCGACTCCAATTTCAGATACCAGTTTCACGCTAACCACAGCGAATGGATTGGCTGCTTTCAAGTCATAAATGAGCTGAGCTAAATCTTCTATGGAATAAATATCATGATGTGGTGGTGGACTGATCAAACCCACACCAGGCACTGAATAACGTGTGTTAGCGATCTCCTCAGTAACTTTATAACCTGGCAATTCGCCACCTTCACCAGGTTTAGCACCTTGGGCCATCTTTATTTGCAGCATTTCAGCATGGGCTAGGTATGAACTGTTCACACCGAAACGGCCTGAGGCAACCTGTTTTATAGCAGAACATATTTCAGGATTCTTATAACGTTCTGGTAGCTCACCTCCTTCACCAGTGTTCGAACGTCCACCAAGTTTATTCATAGCCCTAGCCAAAGCAGTATGAGCTTCTGAAGAAATACTTCCCAAACTCATTGCACCTGTAGAAAAACGTTTTACTATTTCTACCGCCGATTCCACTAAGTCCAACGGTAAAGGCTTTTCCGAATAATTAAAATCTAGCTGTCCACGTAGAGTGCAGTGACGCGAACATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCTATTATTACGGGATGCAGCCTGAAGTTTTGCTATCACCTCTGGGCTGTTCATGTGATTTTCTCCACCAAGTCTCCAGTGATAAAATCCAGGATTATTTCCGAACTGACCAAGATTATCAAGTACTTTAGTGCAAAGTGTTTGACATTCTGGATAGGCTAGTCGGTGACGTGAGGTAACTTCTCTTGCTAATATTTCGAAATCTGCTCCGCCTACACGGCTTACAGCGCCACAGAAACACATATCAATCACAGATTGTGCTAAGCCAACAGCTTCAAATATCTGTGCACTCTTGTAGCTATGCAATGTTGAGATTCCCATTTTAGCCATAACTTTAAGTATACCACGTTCAACAGATGTTATGAAACTTGAATATAATTCTTCTTCATTCACAACTGTAGCTGATGTTAGAAGACCTTCACAGTTCAAACGTGAGACAGATTCAAAAATTAGGTAAGGACATATTGCATCTGCACCAAAACCAATAAGTGTACAAAAATGATGAACTTCTTTTGATTCACCCGTTTCCGCAATTATTCCAACCCTCATGCGAAGCTCACGACGAACTAAACGTTGATGTACAGCCCCTACAGCTAACAGTATTGGAACGGGAAGCCGATCTCGACTACTAGCCCTATCAGAAATTATTAACAAATCCACACTATCGTGTAAAACTGCGTTCTCAGCCTTATCACAGAGGTCTAGTAGAAACTGGAACAGTTTTGATCCCAATGAAATTTCTCCAGAACCTTCATTTACAGATAATGTAGTGTCCAAAATAACACTACGCCAAGAGAGAACAGTACTTGTAATT] [+] EMBL CD195420 [GCATGCTATGACCACGTCTCGTCCTGTGCGTATTTGTCCATCAACCTGCAGTTTAACTCGTGAACGAGCCTGTTGACTGGTTAGGGATTGATGAGTCTCTGCAATACCCAATTCCCATGGAAGTCCAGCATGTTTGATTCCTGTCCAACTACTAGCACCAGTACCACCATCATGACCAGAAATTGTTATATGTGATGCGCGAGCCTTTGCCACACCAGCAGCAACGATACCGACTCCAATTTCAGATACCAGTTTCACGCTAACCACAGCGAATGGATTGGCTGCTTTCAAGTCATAAATGAGCTGAGCTAAATCTTCTATGGAATAAATATCATGAT ] [-] EMBL CD195450 [ CATGCTATGACCACGTCTCGTCCTGTGCGTATTTGTCCATCAACCTGCAGTTTAACTCGTGAACGAGCCTGTTGACTGGTTAGGGATTGATGAGTCTCTGCAATACCCAATTCCCATGGAAGTCCAGCATGTTTGATTCCTGTCCAACTACTAGCACCAGTACCACCATCATGACCAGAAATCGTTATATGTGATGCGCGAGCCTTTGCCACACCAGCAGCAACGATACCGACTCCAATTTCAGATACCAGTTTCACGCTAACCACAGCGAATGGATTGGCTGCTTTCAAGTCATAAATGAGCTGAGCTAAATCTTCTATGGAATAAATATCATGATGTGGTGGTGGACTGATCAAACCCACACCAGGCACTGAATAACGTGTGTTA ] [+] EMBL CD094596 [ GTGAACGAGCCTGTTGACTGGTTAGGGATTGATGAGTCTCTGCAATACCCAATTCCCATGGAAGTCCAGCATGTTTGATTCCTGTCCAACTACTAGCACCAGTACCACCATCATGACCAGGAATTGTTATATGTGATGCGCGAGCCTTTGCCACACCAGCAGCAACGATACCGACTCCAATTTCAGATACCAGTTTCACGCTAACCACAGCGAATGGATTGGCTGCTTTCAAGTCATAAATGAGCTGAGCTAAATCTTCTATGGAATAAATATCATGATGTGGTGGTGGACTGATCAAACCCACACCAGGCACTGAATAACGTGTGTTAGCGATCTCCTCAGTAACTTTATAACCTGGCAATTCGCCACCTTCACCAGGTTTAGCACCTTGGGCCATCTTTATTTGCAGCATTTCAGCATGGGCTAGGTATGAACTGTTCACACCGAAACGGCCTGAGGCAACCTGTTTTATAGCAGAACATATTTCAGGATTCTTATAACGTTCTGGTAGCTCACCTCCTTCACCAGTGTTCGAACGTCCACCAAGTTTATTCATAGCCCTAGCCAAAGCAGTATGAGCTTnc ] [+] EMBL CD147922 [ GCAGCATTTCAGCATGGGCTAGGTATGAACTGTTCACACCGAAACGGCCTGAGGCAACCTGTTTTATAGCAGAACATATTTCAGGATTCTTATAACGTTCTGGTAGCTCACCTCCTTCACCAGTGTTCGAACGTCCACCAAGTTTATTCATAGCCCTAGCCAAAGCAGTATGAGCTTCTGAAGAAATACTTCCCAAACTCATTGCACCTGTAGAAAAACGTTTTACTATTTCTACCGCCGATTCCACTAAGTCCAACGGTAAAGGCTTTTCCGAATAATTAAAATCTAGCTGTCCACGTAGAGTGCAGTGACGCGAACATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCT ] [-] EMBL CD147442 [ CAGCATTTCAGCATGGGCTAGGTATGAACTGTTCACACCGAAACGGCCTGAGGCAACCTGTTTTATAGCAGAACACATTTCAGGATTCTTATAACGTTCTGGTAGCTCACCTCCTTCACCAGTGTTCGAACGTCCACCAAGTTTATTCATAGCCCTAGCCAAAGCAGTATGAGCTTCTGAAGAAATACTTCCCAAACTCATTGCACCTGTAGAAAAACGTTTTACTATTTCTACCGCCGATTCCACTAAGTCCAACGGTAAAGGCTTTTCCGAATAATTAAAATCCAGCTGTCCACGTAGAGTGCAGTGACGCGAACATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCTATTATTACGGGATGCAGCCTGAAGTTTTGC ] [+] EMBL CD061371 [ GAACATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCTATTATTACGGGATGCAGCCTGAAGTTTTGCTATCACCTCTGGGCTGTTCATGTGATTTTCTCCACCAAGTCTCCAGTGATAAAATCCAGGATTATTTCCGAACTGACCAAGATTATCAAGTACTTTAGTGCAAAGTGTTTGACATTCTGGATAGGCTAGTCGGTGACGTGAGGTAACTTCTCTTGCTAATATTTCGAAATCTGCTCCGCCTACACGGCTTACAGCGCCACAGAAACACATATCAATCACAGATTGTGCTAAGCCAACAGCTTCAAATATCTGTGCACT ] [-] EMBL CD061227 [ CATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCTATTATTACGGGATGCAGCCTGAAGTTTTGCTATCACCTCTGGGCCGTTCATGTGATTTTCTCCACCAAGTCTCCAGTGATAAAATCCAGGATTATTTCCGAACTGACCAAGATTATCAAGTACTTTAGTGCAAAGTGTTTGACATTCTGGATAGGCTAGTCGGAGACGTGAGGTAACTTCTCTTGCTAATATTTCGAAATCTGCTCCGCCTACACGGCTTACAGCGCCACAGAAACACATATCAATCACAGATTGTGCTAAGCCAACAGCTTC ] [-] EMBL CD188217 [ TCAAGTACTTTAGTGCAAAGTGTTTGACATTCTGGATAGGCTAGTCGGTGACGTGAGGTAACTTCTCTTGCTAATATTTCGAAATCTGCTCCGCCTACACGGCTTACAGCGCCACAGAAACACATATCAATCACAGATTGTGCTAAGCCAACAGCTTCAAATATCTGTGCACTCTTGTAGCTATGCAATGTTGAGATTCCCATTTTAGCCATAACTTTAAGTATACCACGTTCAACAGATGTTATGAAACTTGAATATAATTCTTCTTCATTCACAACTGTAGCTGATGTTAGA ] [-] EMBL CD186012 [ CAGCTTCAAATATCTGTGCACTCTTGTAGCTATGCAATG TGAGATTCCCATTTTAGCCATAACTTTAAGTATACCACGTTCAACAGATGTTATGAAACTTGAATATAATTCTTCTTCATTCACAACTGTAGCTGATGTTAGAAGACCTTCACAGTTCAAACGTGAGACAGATTCAAAAATTAGGTAAGGACATATTGCATCTGCACCAAAACCAATAAGTGTACAAAAATGATGAACTTCTTTTGATTCACCCGTTTCCGCAATTATTCCAACCCTCATGCGAAGCTCACGACGAACTAAACGTTGATGTACAGCCCCTACAGCTAACAGTATTGGAACGGGAAGCCGATCTCGACTACTAGCCCTATCAGAAATTATTAACAAATCCACACTATCGTGTAAAACTGCGTTCTCAGCCTTATCACAGAGGTCTAGTAGAAACTGGAACAGTTTTGATCCCAATGAAATTTCTCCAGAACCTTCATTTACAGATAATGTAGTGTCCAAAATAACACTACGCCAAGAGAGAACAGTACTTGTAATT] [+] EMBL CD115954 [ TTATGAAACTTGAATATAATTCTTCTTCATTCACAACTGTAGCTGATGTTAGAAGACCTTCACAGCTCAAACGTGAGACAGATTCAAAAATTAGGTAAGGACATATTGCATCTGCACCAAAACCAATAAGTGTACAAAAATGATGAACTTCTTTTGATTCACCCGTTTCCGCAATTATTCCAACCCTCATGCGAAGCTCACGACGAACTAAACGTTGATGTACAGCCCCTACAGCTAACAGTATTGGAACGGGAAGCCGATCTCGACTACTAG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||