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Schistosoma mansoni
cluster # 9530 cluster # 9530       Sequences # 10       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9530#0 length = 1636 sequences # 10  

consensusID : consensus_9530#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1636
fasta sequence
                              [GCATGCTATGACCACGTCTCGTCCTGTGCGTATTTGTCCATCAACCTGCAGTTTAACTCGTGAACGAGCCTGTTGACTGGTTAGGGATTGATGAGTCTCTGCAATACCCAATTCCCATGGAAGTCCAGCATGTTTGATTCCTGTCCAACTACTAGCACCAGTACCACCATCATGACCAGAAATTGTTATATGTGATGCGCGAGCCTTTGCCACACCAGCAGCAACGATACCGACTCCAATTTCAGATACCAGTTTCACGCTAACCACAGCGAATGGATTGGCTGCTTTCAAGTCATAAATGAGCTGAGCTAAATCTTCTATGGAATAAATATCATGATGTGGTGGTGGACTGATCAAACCCACACCAGGCACTGAATAACGTGTGTTAGCGATCTCCTCAGTAACTTTATAACCTGGCAATTCGCCACCTTCACCAGGTTTAGCACCTTGGGCCATCTTTATTTGCAGCATTTCAGCATGGGCTAGGTATGAACTGTTCACACCGAAACGGCCTGAGGCAACCTGTTTTATAGCAGAACATATTTCAGGATTCTTATAACGTTCTGGTAGCTCACCTCCTTCACCAGTGTTCGAACGTCCACCAAGTTTATTCATAGCCCTAGCCAAAGCAGTATGAGCTTCTGAAGAAATACTTCCCAAACTCATTGCACCTGTAGAAAAACGTTTTACTATTTCTACCGCCGATTCCACTAAGTCCAACGGTAAAGGCTTTTCCGAATAATTAAAATCTAGCTGTCCACGTAGAGTGCAGTGACGCGAACATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCTATTATTACGGGATGCAGCCTGAAGTTTTGCTATCACCTCTGGGCTGTTCATGTGATTTTCTCCACCAAGTCTCCAGTGATAAAATCCAGGATTATTTCCGAACTGACCAAGATTATCAAGTACTTTAGTGCAAAGTGTTTGACATTCTGGATAGGCTAGTCGGTGACGTGAGGTAACTTCTCTTGCTAATATTTCGAAATCTGCTCCGCCTACACGGCTTACAGCGCCACAGAAACACATATCAATCACAGATTGTGCTAAGCCAACAGCTTCAAATATCTGTGCACTCTTGTAGCTATGCAATGTTGAGATTCCCATTTTAGCCATAACTTTAAGTATACCACGTTCAACAGATGTTATGAAACTTGAATATAATTCTTCTTCATTCACAACTGTAGCTGATGTTAGAAGACCTTCACAGTTCAAACGTGAGACAGATTCAAAAATTAGGTAAGGACATATTGCATCTGCACCAAAACCAATAAGTGTACAAAAATGATGAACTTCTTTTGATTCACCCGTTTCCGCAATTATTCCAACCCTCATGCGAAGCTCACGACGAACTAAACGTTGATGTACAGCCCCTACAGCTAACAGTATTGGAACGGGAAGCCGATCTCGACTACTAGCCCTATCAGAAATTATTAACAAATCCACACTATCGTGTAAAACTGCGTTCTCAGCCTTATCACAGAGGTCTAGTAGAAACTGGAACAGTTTTGATCCCAATGAAATTTCTCCAGAACCTTCATTTACAGATAATGTAGTGTCCAAAATAACACTACGCCAAGAGAGAACAGTACTTGTAATT]

[+] EMBL CD195420             [GCATGCTATGACCACGTCTCGTCCTGTGCGTATTTGTCCATCAACCTGCAGTTTAACTCGTGAACGAGCCTGTTGACTGGTTAGGGATTGATGAGTCTCTGCAATACCCAATTCCCATGGAAGTCCAGCATGTTTGATTCCTGTCCAACTACTAGCACCAGTACCACCATCATGACCAGAAATTGTTATATGTGATGCGCGAGCCTTTGCCACACCAGCAGCAACGATACCGACTCCAATTTCAGATACCAGTTTCACGCTAACCACAGCGAATGGATTGGCTGCTTTCAAGTCATAAATGAGCTGAGCTAAATCTTCTATGGAATAAATATCATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD195450             [ CATGCTATGACCACGTCTCGTCCTGTGCGTATTTGTCCATCAACCTGCAGTTTAACTCGTGAACGAGCCTGTTGACTGGTTAGGGATTGATGAGTCTCTGCAATACCCAATTCCCATGGAAGTCCAGCATGTTTGATTCCTGTCCAACTACTAGCACCAGTACCACCATCATGACCAGAAATCGTTATATGTGATGCGCGAGCCTTTGCCACACCAGCAGCAACGATACCGACTCCAATTTCAGATACCAGTTTCACGCTAACCACAGCGAATGGATTGGCTGCTTTCAAGTCATAAATGAGCTGAGCTAAATCTTCTATGGAATAAATATCATGATGTGGTGGTGGACTGATCAAACCCACACCAGGCACTGAATAACGTGTGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD094596             [                                                           GTGAACGAGCCTGTTGACTGGTTAGGGATTGATGAGTCTCTGCAATACCCAATTCCCATGGAAGTCCAGCATGTTTGATTCCTGTCCAACTACTAGCACCAGTACCACCATCATGACCAGGAATTGTTATATGTGATGCGCGAGCCTTTGCCACACCAGCAGCAACGATACCGACTCCAATTTCAGATACCAGTTTCACGCTAACCACAGCGAATGGATTGGCTGCTTTCAAGTCATAAATGAGCTGAGCTAAATCTTCTATGGAATAAATATCATGATGTGGTGGTGGACTGATCAAACCCACACCAGGCACTGAATAACGTGTGTTAGCGATCTCCTCAGTAACTTTATAACCTGGCAATTCGCCACCTTCACCAGGTTTAGCACCTTGGGCCATCTTTATTTGCAGCATTTCAGCATGGGCTAGGTATGAACTGTTCACACCGAAACGGCCTGAGGCAACCTGTTTTATAGCAGAACATATTTCAGGATTCTTATAACGTTCTGGTAGCTCACCTCCTTCACCAGTGTTCGAACGTCCACCAAGTTTATTCATAGCCCTAGCCAAAGCAGTATGAGCTTnc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD147922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCAGCATTTCAGCATGGGCTAGGTATGAACTGTTCACACCGAAACGGCCTGAGGCAACCTGTTTTATAGCAGAACATATTTCAGGATTCTTATAACGTTCTGGTAGCTCACCTCCTTCACCAGTGTTCGAACGTCCACCAAGTTTATTCATAGCCCTAGCCAAAGCAGTATGAGCTTCTGAAGAAATACTTCCCAAACTCATTGCACCTGTAGAAAAACGTTTTACTATTTCTACCGCCGATTCCACTAAGTCCAACGGTAAAGGCTTTTCCGAATAATTAAAATCTAGCTGTCCACGTAGAGTGCAGTGACGCGAACATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD147442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAGCATTTCAGCATGGGCTAGGTATGAACTGTTCACACCGAAACGGCCTGAGGCAACCTGTTTTATAGCAGAACACATTTCAGGATTCTTATAACGTTCTGGTAGCTCACCTCCTTCACCAGTGTTCGAACGTCCACCAAGTTTATTCATAGCCCTAGCCAAAGCAGTATGAGCTTCTGAAGAAATACTTCCCAAACTCATTGCACCTGTAGAAAAACGTTTTACTATTTCTACCGCCGATTCCACTAAGTCCAACGGTAAAGGCTTTTCCGAATAATTAAAATCCAGCTGTCCACGTAGAGTGCAGTGACGCGAACATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCTATTATTACGGGATGCAGCCTGAAGTTTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD061371             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAACATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCTATTATTACGGGATGCAGCCTGAAGTTTTGCTATCACCTCTGGGCTGTTCATGTGATTTTCTCCACCAAGTCTCCAGTGATAAAATCCAGGATTATTTCCGAACTGACCAAGATTATCAAGTACTTTAGTGCAAAGTGTTTGACATTCTGGATAGGCTAGTCGGTGACGTGAGGTAACTTCTCTTGCTAATATTTCGAAATCTGCTCCGCCTACACGGCTTACAGCGCCACAGAAACACATATCAATCACAGATTGTGCTAAGCCAACAGCTTCAAATATCTGTGCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD061227             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCTATTATTACGGGATGCAGCCTGAAGTTTTGCTATCACCTCTGGGCCGTTCATGTGATTTTCTCCACCAAGTCTCCAGTGATAAAATCCAGGATTATTTCCGAACTGACCAAGATTATCAAGTACTTTAGTGCAAAGTGTTTGACATTCTGGATAGGCTAGTCGGAGACGTGAGGTAACTTCTCTTGCTAATATTTCGAAATCTGCTCCGCCTACACGGCTTACAGCGCCACAGAAACACATATCAATCACAGATTGTGCTAAGCCAACAGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD188217             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCAAGTACTTTAGTGCAAAGTGTTTGACATTCTGGATAGGCTAGTCGGTGACGTGAGGTAACTTCTCTTGCTAATATTTCGAAATCTGCTCCGCCTACACGGCTTACAGCGCCACAGAAACACATATCAATCACAGATTGTGCTAAGCCAACAGCTTCAAATATCTGTGCACTCTTGTAGCTATGCAATGTTGAGATTCCCATTTTAGCCATAACTTTAAGTATACCACGTTCAACAGATGTTATGAAACTTGAATATAATTCTTCTTCATTCACAACTGTAGCTGATGTTAGA                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD186012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGCTTCAAATATCTGTGCACTCTTGTAGCTATGCAATG TGAGATTCCCATTTTAGCCATAACTTTAAGTATACCACGTTCAACAGATGTTATGAAACTTGAATATAATTCTTCTTCATTCACAACTGTAGCTGATGTTAGAAGACCTTCACAGTTCAAACGTGAGACAGATTCAAAAATTAGGTAAGGACATATTGCATCTGCACCAAAACCAATAAGTGTACAAAAATGATGAACTTCTTTTGATTCACCCGTTTCCGCAATTATTCCAACCCTCATGCGAAGCTCACGACGAACTAAACGTTGATGTACAGCCCCTACAGCTAACAGTATTGGAACGGGAAGCCGATCTCGACTACTAGCCCTATCAGAAATTATTAACAAATCCACACTATCGTGTAAAACTGCGTTCTCAGCCTTATCACAGAGGTCTAGTAGAAACTGGAACAGTTTTGATCCCAATGAAATTTCTCCAGAACCTTCATTTACAGATAATGTAGTGTCCAAAATAACACTACGCCAAGAGAGAACAGTACTTGTAATT]
[+] EMBL CD115954             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTATGAAACTTGAATATAATTCTTCTTCATTCACAACTGTAGCTGATGTTAGAAGACCTTCACAGCTCAAACGTGAGACAGATTCAAAAATTAGGTAAGGACATATTGCATCTGCACCAAAACCAATAAGTGTACAAAAATGATGAACTTCTTTTGATTCACCCGTTTCCGCAATTATTCCAACCCTCATGCGAAGCTCACGACGAACTAAACGTTGATGTACAGCCCCTACAGCTAACAGTATTGGAACGGGAAGCCGATCTCGACTACTAG                                                                                                                                                                                      ]


>consensus_9530#0 GCATGCTATGACCACGTCTCGTCCTGTGCGTATTTGTCCATCAACCTGCAGTTTAACTCG TGAACGAGCCTGTTGACTGGTTAGGGATTGATGAGTCTCTGCAATACCCAATTCCCATGG AAGTCCAGCATGTTTGATTCCTGTCCAACTACTAGCACCAGTACCACCATCATGACCAGA AATTGTTATATGTGATGCGCGAGCCTTTGCCACACCAGCAGCAACGATACCGACTCCAAT TTCAGATACCAGTTTCACGCTAACCACAGCGAATGGATTGGCTGCTTTCAAGTCATAAAT GAGCTGAGCTAAATCTTCTATGGAATAAATATCATGATGTGGTGGTGGACTGATCAAACC CACACCAGGCACTGAATAACGTGTGTTAGCGATCTCCTCAGTAACTTTATAACCTGGCAA TTCGCCACCTTCACCAGGTTTAGCACCTTGGGCCATCTTTATTTGCAGCATTTCAGCATG GGCTAGGTATGAACTGTTCACACCGAAACGGCCTGAGGCAACCTGTTTTATAGCAGAACA TATTTCAGGATTCTTATAACGTTCTGGTAGCTCACCTCCTTCACCAGTGTTCGAACGTCC ACCAAGTTTATTCATAGCCCTAGCCAAAGCAGTATGAGCTTCTGAAGAAATACTTCCCAA ACTCATTGCACCTGTAGAAAAACGTTTTACTATTTCTACCGCCGATTCCACTAAGTCCAA CGGTAAAGGCTTTTCCGAATAATTAAAATCTAGCTGTCCACGTAGAGTGCAGTGACGCGA ACATTCATCAGCGACTTGGACAAACATGTTGTAAGCTTCATGGCTATTATTACGGGATGC AGCCTGAAGTTTTGCTATCACCTCTGGGCTGTTCATGTGATTTTCTCCACCAAGTCTCCA GTGATAAAATCCAGGATTATTTCCGAACTGACCAAGATTATCAAGTACTTTAGTGCAAAG TGTTTGACATTCTGGATAGGCTAGTCGGTGACGTGAGGTAACTTCTCTTGCTAATATTTC GAAATCTGCTCCGCCTACACGGCTTACAGCGCCACAGAAACACATATCAATCACAGATTG TGCTAAGCCAACAGCTTCAAATATCTGTGCACTCTTGTAGCTATGCAATGTTGAGATTCC CATTTTAGCCATAACTTTAAGTATACCACGTTCAACAGATGTTATGAAACTTGAATATAA TTCTTCTTCATTCACAACTGTAGCTGATGTTAGAAGACCTTCACAGTTCAAACGTGAGAC AGATTCAAAAATTAGGTAAGGACATATTGCATCTGCACCAAAACCAATAAGTGTACAAAA ATGATGAACTTCTTTTGATTCACCCGTTTCCGCAATTATTCCAACCCTCATGCGAAGCTC ACGACGAACTAAACGTTGATGTACAGCCCCTACAGCTAACAGTATTGGAACGGGAAGCCG ATCTCGACTACTAGCCCTATCAGAAATTATTAACAAATCCACACTATCGTGTAAAACTGC GTTCTCAGCCTTATCACAGAGGTCTAGTAGAAACTGGAACAGTTTTGATCCCAATGAAAT TTCTCCAGAACCTTCATTTACAGATAATGTAGTGTCCAAAATAACACTACGCCAAGAGAG AACAGTACTTGTAATT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)