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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9537#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 746 fasta sequence
[CAAGCACAATATTCATGGATGAAATCGATTCAATTTGTTCTCGACGTGGTAGTGAATCGGAACACGAAAGTTCTCGCCGTGTTAAATCTGAACTTTTAATGCAAATGGATGGAGTAACAGGAGCTACAGGACAAGAAGAGGATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT-TGAG-AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC-TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA-TTTCG-AAG-AAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATTTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTCAAACCTACGTGTCTCAAATCATCAGGTTATATGAATACTACATTCATAGGTCAAATGGTCGAATA]
[+] EMBL CD191654 [CAAGCACAATATTCATGGATGAAATCGATTCAATTTGTTCTCGACGTGGTAGTGAATCGGAACACGAAAGTTCTCGCCGTGTTAAATCTGAACTTTTAATGCAAATGGATGGAGTAACAGGAGCTACAGGACAAGAAGAGGATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATCTGTNTCAGCCAGTAATGTT ]
[+] EMBL CD191923 [CAAGCACAATATTCATGGATGAAATCGATTCAATTTGTTCTCGACGTGGTAGTGAATCGGAACACGAAAGTTCTCGCCGTGTTAAATCTGAACTTTTAATGCAAATGGATGGAGTAACAGGAGCTACAGGACAAGAAGAGGATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATC ]
[+] EMBL CD164568 [ ccaccAAGAGGATCCTACAAAATCTGTCATGGTTCTTGCTGCTACTAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACT ]
[+] EMBL CD164514 [ GATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCGAAAG AACCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATNTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATTTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTC ]
[+] EMBL CD164627 [ GATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACACACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATTTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTC ]
[+] EMBL CD164570 [ GATCCTACAAAATCTGTCATGGTTCTTGCTGCTACTAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG GAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATNTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTC ]
[+] EMBL CD121840 [ GATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAGATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGACAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAACGATGTCTATGCGACGAGCTATAGAAGGACTCCCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATG ]
[+] EMBL CD164509 [ GATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCTNTGAGAAAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGANTTTCG AAGAAAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATTTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTC ]
[-] EMBL CD067289 [ TTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATCTGCTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTG ]
[-] EMBL CD121978 [ ACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTCTTTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATTTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTCAAACCTACGTGTCTCAAATCATCAGGTTATATGAATACTACATTCATAGGTCAAATGGTCGAATA]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||