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Schistosoma mansoni
cluster # 9558 cluster # 9558       Sequences # 10       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9558#0 length = 917 sequences # 10  

consensusID : consensus_9558#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 917
fasta sequence
                              [TGTGGAATTATACTTCACAGGTTGTAAACTACTGGTGCGATTTGTTTGAGGAATTATAGGATCTAAGTGGGTTGTATTATCAGACTGGCTTGCTGTTTGTTGATCTCGATGTAAATGGGAACCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGCTGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGC-AAGGTTCGCAACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGACATCAAAATACTTCCATCACTCAGATTAGGTTCTGGAATTGTACTGTTGAGCTTGTCACGCCGACTGCGAACCATTGGTATGGAACTTGAAGTGGTATGGTTTGAAGACATATCCCATGGTGTCGAGCCGAATGGTGGACGGTTTCCAAGAACATCTTGAGTAGATACTGTAGCATAACCACTATTTCCCCAAAGCAAACGGGTTTCTTCGAAACTTAGGTTGGCAATAGAGCTAATGAGTCCCTCCGTAGACAAAT]

[+] EMBL CD124365             [TGTGGAATTATACTTCACAGGTTGTAAACTACTGGTGCGATTTGTTTGAGGAATTATAGGATCTAAGTGGGTTGTATTATCAGACTGGCTTGCTGTTTGTTGATCTCGATGTAAATGGGAACCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGCTGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGC AAGGTTCGCAACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD121834             [                                                                                                   TTGATCTCGATGTAAATGGGAACCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGCTGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGC AAGGTTCGCAACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTG                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD121943             [                                                                                                   gTGATCTCGATGTAAATGGGAGCCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGCTGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGC AAGGTTCGCAACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATTATATTGATAAGAATTTAGTGCAACAGACTGGG                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD159092             [                                                                                                     GATCTCGATGTAAATGGGAACCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGCTGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGC AAGGTTCGCAACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGNAGAGTTACTTAGAACGTGATCCGNCA                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD190289             [                                                                                                                                                                ACTGAAGGATCTGTATNTGCTGGAACGTTGATGAAATAAGGTACTAAGTNNTCAGCTTGAACGGAA TGCNAAGGTTCGCAACTAATCGCTTCTGAGGTANAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATCGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAG                                                                                                                                                                                                                                                                  ]
[+] EMBL CD114318             [                                                                                                                                                                                                                                                                                                                                    GAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTACGCGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAG                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD202254             [                                                                                                                                                                                                                                                                                                                                           TGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGACATCAAAATACTTCCATCACTCAGATTANGTTCTGGAATTGTACTGTTGAG                                                                                                                                                                                                              ]
[+] EMBL CD170685             [                                                                                                                                                                                                                                                                                                                                                         GTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGACATCAAAATACTTCCATCACTCAGATTAGGTTCTGGAATTGTACTGTTGAGCTTGTCACGCCGACTGCGAACCATTGGTATGGAACTTGAAGTGGTACGGTT                                                                                                                                                           ]
[-] EMBL CD114288             [                                                                                                                                                                                                                                                                                                                                                                                   TTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAG         CTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGACATCAAAATACTTCCATCACTCAGATTAGGTTCTGGAATTGTACTGCTGAGCTTGTCACGCCGACTGCGAACCATTGGTATGGAACTTGAAGTGGTATGGT                                                                                                                                                            ]
[-] EMBL CD195333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGACATCAAAATACTTCCATCACTCAGATTAGGTTCTGGAATTGTACTGTTGAGCTTGTCACGGCGACTGCGAACCATTGGTATGGAACTTGAAGTGGTATGGTTTGAAGACATATCCCATGGTGTCGAGCCGAATGGTGGACGGTTTCCAAGAACATCTTGAGTAGATACTGTAGCATAACCACTATTTCCCCAAAGCAAACGGGTTTCTTCGAAACTTAGGTTGGCAATAGAGCTAATGAGTCCCTCCGTAGACAAAT]


>consensus_9558#0 TGTGGAATTATACTTCACAGGTTGTAAACTACTGGTGCGATTTGTTTGAGGAATTATAGG ATCTAAGTGGGTTGTATTATCAGACTGGCTTGCTGTTTGTTGATCTCGATGTAAATGGGA ACCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGC TGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGCAAGGTTCGCA ACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTAT AATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATA TTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATT TTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATA AGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAA GGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTT ACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGA CATCAAAATACTTCCATCACTCAGATTAGGTTCTGGAATTGTACTGTTGAGCTTGTCACG CCGACTGCGAACCATTGGTATGGAACTTGAAGTGGTATGGTTTGAAGACATATCCCATGG TGTCGAGCCGAATGGTGGACGGTTTCCAAGAACATCTTGAGTAGATACTGTAGCATAACC ACTATTTCCCCAAAGCAAACGGGTTTCTTCGAAACTTAGGTTGGCAATAGAGCTAATGAG TCCCTCCGTAGACAAAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)