These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9558#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 917 fasta sequence [TGTGGAATTATACTTCACAGGTTGTAAACTACTGGTGCGATTTGTTTGAGGAATTATAGGATCTAAGTGGGTTGTATTATCAGACTGGCTTGCTGTTTGTTGATCTCGATGTAAATGGGAACCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGCTGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGC-AAGGTTCGCAACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGACATCAAAATACTTCCATCACTCAGATTAGGTTCTGGAATTGTACTGTTGAGCTTGTCACGCCGACTGCGAACCATTGGTATGGAACTTGAAGTGGTATGGTTTGAAGACATATCCCATGGTGTCGAGCCGAATGGTGGACGGTTTCCAAGAACATCTTGAGTAGATACTGTAGCATAACCACTATTTCCCCAAAGCAAACGGGTTTCTTCGAAACTTAGGTTGGCAATAGAGCTAATGAGTCCCTCCGTAGACAAAT] [+] EMBL CD124365 [TGTGGAATTATACTTCACAGGTTGTAAACTACTGGTGCGATTTGTTTGAGGAATTATAGGATCTAAGTGGGTTGTATTATCAGACTGGCTTGCTGTTTGTTGATCTCGATGTAAATGGGAACCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGCTGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGC AAGGTTCGCAACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGC ] [+] EMBL CD121834 [ TTGATCTCGATGTAAATGGGAACCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGCTGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGC AAGGTTCGCAACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTG ] [-] EMBL CD121943 [ gTGATCTCGATGTAAATGGGAGCCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGCTGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGC AAGGTTCGCAACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATTATATTGATAAGAATTTAGTGCAACAGACTGGG ] [+] EMBL CD159092 [ GATCTCGATGTAAATGGGAACCAGTAAACATACTGAAAGACTCTGCAGGTAAGTTGGACACTGAAGGATCTGTATTTGCTGGAACGTTGATGAAATAAGGTACTAAGTTTTCAGCTTGAACGGAATTGC AAGGTTCGCAACTAATCGCTTCTGAGGTAAAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGNAGAGTTACTTAGAACGTGATCCGNCA ] [-] EMBL CD190289 [ ACTGAAGGATCTGTATNTGCTGGAACGTTGATGAAATAAGGTACTAAGTNNTCAGCTTGAACGGAA TGCNAAGGTTCGCAACTAATCGCTTCTGAGGTANAGCTTTTTACATGTACATATTCCGAGGATCTATTAGGTATAATCGAATAAGGTAGTTGTTGTAGAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATCGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAG ] [+] EMBL CD114318 [ GAGACTGTGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTACGCGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAG ] [+] EMBL CD202254 [ TGTTGCAGCTGAGGGTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGACATCAAAATACTTCCATCACTCAGATTANGTTCTGGAATTGTACTGTTGAG ] [+] EMBL CD170685 [ GTGGACGCATATAATATTGAGCTGGATTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGACATCAAAATACTTCCATCACTCAGATTAGGTTCTGGAATTGTACTGTTGAGCTTGTCACGCCGACTGCGAACCATTGGTATGGAACTTGAAGTGGTACGGTT ] [-] EMBL CD114288 [ TTAAAGCAATTTGAAATCAATCCATTGGCTCCAGATTGAAGAGGTTGATTTTGATGCAAAGCATCTGACTCATTAGGAAGGATTGATCTTACGTTTGAATCATATTGATAAGAATTTAATGCAACAGACTGGGATCCATTGAGTGAATTAGGTGCTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAG CTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGACATCAAAATACTTCCATCACTCAGATTAGGTTCTGGAATTGTACTGCTGAGCTTGTCACGCCGACTGCGAACCATTGGTATGGAACTTGAAGTGGTATGGT ] [-] EMBL CD195333 [ CTGGACGATGAGGAAAGGCATTTGACAAGTTTTCAGAAATGTCTCTCAAGAACTGAGCATTACTACCTGGAGAGTTACTTAGAACGTGATCCGCCATCTGCATCCCCAAAGCCACCATATCTTTAGATCCAGGAGACATCAAAATACTTCCATCACTCAGATTAGGTTCTGGAATTGTACTGTTGAGCTTGTCACGGCGACTGCGAACCATTGGTATGGAACTTGAAGTGGTATGGTTTGAAGACATATCCCATGGTGTCGAGCCGAATGGTGGACGGTTTCCAAGAACATCTTGAGTAGATACTGTAGCATAACCACTATTTCCCCAAAGCAAACGGGTTTCTTCGAAACTTAGGTTGGCAATAGAGCTAATGAGTCCCTCCGTAGACAAAT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||