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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9577#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 642 fasta sequence
[CCGCTCTGTGTGGATGAGACATGCTTCAGTCTGCAAATGTTCATTCTCTTGCTTTGTCCAAAATCATTAAGCCGGAC-AAAAAACCGGTCACCCCATTAGAAGAAGAAATTGCTCAAGCGATTATAGACTTACAGATTCATGATGACTGGTCTGACACCATGAAGCTTCTGTACTTTTGTGAAGCAAAAGAAATGACTATAGGTAAAGAAAAAGCGGTCGTTATATATGTACCTGTTCCACAACTACGGACATACCAGTTTATACATAACAGACTCGTAGGCGAGCTCGAAAAGAAGCTCCGTGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAGAATCATTGCAAAGCCTAAAAGAAATTGCAAATTTAATCCGAAGCAAAAGCGTCCTAGAAGTAGGACCCTAACAGCTGTGCACGAAGCTATATTGAAAGATCTTGTTTACCCTGCTGAAATTGTAGGAAAACGCATTCAAGTCAGATGTGATGGAAGTACCTTAATCAAATGCCACTTGGATGTTGCACAGAGAAACTACATAGAACATAAGCTCAAAACTATCAC-GGGATTATACAAAAAG-TTGAC-GGGTAAAGACGTCCAGATCGAGTTTCCGGATTGGGTATTGTGAAAATATGTAATATAAGTTT]
[+] EMBL CD113502 [CCGCTCTGTGTGGATGAGACATGCTTCAGTCTGCAAATGTTCATTCTCTTGCTTTGTCCAAAATCATTAAGCCGGACAAAAAAACCGGTCACCCCATTAGAAGAAGAAATTGCTCAAGCGATTATAGACTTACAGATTCATGATGACTGGTCTGACACCATGAAGCTTCTGTACTTTTGTGAAGCAAAAGAAATGACTATAGGTAAAGAAAAAGCGGTCGTTATATATGTACCTGTTCCACAACTACGGACATACCAGTTTATACATAACAGACTCGTAGGCGAGCTCGAAAAGAAGCTCCGTGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAGAATCATTGCAAAGCCTAAAAGAAATTGCAAATTTAATCCGAAGCANAAGCGTCCTAGAAGTAGG ]
[+] EMBL CD113414 [ GGATGAGACATGCTTCAGTCTGCAAATGTTCATTCTCTTGCTTTGTCCAAAATCATTAAGCCGGACAAAAAAACCGGTCACCCCATTAGAAGAAGAAATTGCTCAAGCGATTATAGACTTACAGATTCATGATGACTGGTCTGACA CATGAAGCTTCTGTACTTTTGTGAAGCAAAAGAAATGACTATAGGTAAAGAAAAAGCGGTCGTTATATATGTACCTGTTCCACAACTACGGACATACCAGTTTATACATAACAGACTCGTAGGCGAGCTCGAAAAGAAGCTCCGTGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAGAATCATTGCAAAGCCTAAAAGAAATTGCAAATTTAATCCGAAGCAAAAGCGTCCTAGAAGTAGG ]
[+] EMBL CD113599 [ gaGATGAGACATGCTTCAGTCTGCAAATGTTCATTCTCTTGCTTTGTCCAAAATCATTAAGCCGGACAAAAAAACCGGTCACCCCATTAGAAGAAGAAATTGCTCAAGCGATTATAGACTTACAGATTCATGATGACTGGTCTGACACCATGAAGCTTCTGTACTTTTGCGAAGCAAAAGAAATGACTATAGGTAAAGAAAAAGCGGTCGTTATATATGTACCTGTTCCACAACTACGGACATACCAGTTTATACATAACAGACTCGTATGCGAGCTCGAAAAGAAGCTCCGTGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAGAATCATTGCATAGCCTACAAGAAATTGCAAATTTAATCCGAAGCACAAGCGTCCTAGAAGTAtg ]
[+] EMBL AI975321 [ GACATGCTTCAGTCTGCAAATGTTCATTCTCTTGCTTTGTCCAAAATCATTAAGCCGGAC AAAAAGCCGGTCACCCCATTAGAAGAAGAAATTGCTCAAGCGATTATAGACTTACAGATTCATGATGACTGGTCTGACACCATGAAGCTTCTGTACTTTTGTGAAGCAAAAGAAATGACTATAGGTAAAGAAAAAGCGGTCGTTATATATGTACCTGTTCCACAACTACGGACATACCAGTTTATACATAACAGACTCGTAGGCGAGCTCGAAAAGAAGCTCCGTGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAGAATCATTGCAAAGCCTAAAAGAAATTGCAAATTTAATCCGAAGCAAAAGCGTCCTAGAAGTAGGACCCTAACAGCTGTGCACGAAGCTATATTGAAAGATCTTGTTTACCCTGCTGAAATTGTAGGAAAACGCATTCAAGTCAGATGTGATGGAAGTACCTTAATCAAATGCCACTTGGATGTTGCACAGAGAAACTACATAGAACATAAGCTCAAAACTATCAC GGGATTATACAAAAAG TTGAC GGGTAAAGACGTCCAGATCGAGTTTCCGGATTGGGTATTGTGAAAATATGTAATATAAGTTT]
[+] EMBL CD080272 [ aggTCAGTCTGCAAATGTTCATTCTCTTGCTTTGTCCAAAATCATTAAGCCGGAC AAAAAACCGGTCACCCCATTAGAAGAAGAAATTGCTCAAGCGATTATAGACTTACAGATTCATGATGACTGGTCTGACACCATGAAGCTTCTGTACTTTTGTGAAGCAAAAGAAATGACTATAGGTAAAGAAAAAGCGGTCGTTATATATGTACCTGTTCCACAACTACGGACATACCAGTTTATACATAACAGACTCGTAGGCGAGCTCGAAAAGAAGCTCCGTGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAGAATCATTGCAAAGCCTAAAAGAAATTGCAAATTTAATCCGAAGCAAAAGCGTCCTAGAAGTAGGACCCTAACAGCTGTGCACGAAGCTATATTGAAAGATCTTGTTTACCCTGCTGAAATTGTAGGAAAACGCATTCAAGTCAGATGTGATGGAAGTACCTTAATCAAATGCCACTTGGATGTTGCACAGAGAAACTACATAGAACATAAGCTCAAAACTATCACGGGGATTATACAAAAAGTTTGACGGGGTAAAGA ]
[+] EMBL AI977567 [ AAGCCGGTCACCCCATTAGAAGAAGAAATTGCTCAAGCGATTATAGACTTACAGATTCATGATGACTGGTCTGACACCATGAAGCTTCTGTACTTTTGTGAAGCAAAAGAAATGACTATAGGTAAAGAAAAAGCGGTCGTTATATATGTACCTGTTCCACAACTACGGACATACCAGTTTATACATAACAGACTCGTAGGCGAGCTCGAAAAGAAGCTCCGCGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAGAATCATTGCAAAGCCTAACAGAAATTGCACATTTAATCCGAAGCAAAAGCGTCCTAGAAGTAGGACCCTAACAGCTGTGCACGAAGCTATATTGAAAGATCTTGTTTACCCTGCTGAAATTGTAGGAGAACGCATTCAAGTCAGATGTGATGCAAGTACCTTAATCNAATGCCACTTCGATGTTGCACAGAGAAACTACATAGAACATAAGCTCAAAACTATCAC ]
[-] EMBL CD197152 [ CAAGCGATTATAGACTTACAGATTCATGATGACTGGTCTGACACCATGAAGCTTCTGTACTTTTGTGAAGCAAAAGAAATGACTATAGGTAAAGAAAAAGCGGTCGTTATATATGTACCTGTTCCACAACTACGGACATACCAGTTTGTACATAACAGACTCGTAGGCGAGCTCGAAAAGAAGCTCCGTGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAGAATCATTGCAAAGCCTAAAAGAAATCGCAAATTTAATCCGAAGCAAAAGCGTCCTAGAAGTAGGACCCTAACAGCTGTGCACGAAGCTATATTGAAAGATCTTGTTTACCCTGCTGAAATTGTAGGAAAACGCATTCAAGTCAGATGTGATGGAAGTACCTTA ]
[-] EMBL CD163657 [ CAGATTCATGATGACTGGTCTGACACCATGAAGCTTCTGTACTTTTGTGAAGCAAAAGAAATGACTATAGGTAAAGAAAAAGCGGTCGTTATATATGTACCTGTTCCACAACTACGGACATACCAGTTTATACATAACAGACTCGTAGGCGAGCTCGAAAAGAAGCTCCGTGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAGAATCATTGCAAAGCCTAAAAGAAATTGCAAATTTAATCCGAAGCAAAAGCGTCCTAGAAGTAGGACCCTAACAGCTGTGCACGAAGCTATATTGAAAGATCTTGTTTACCCTGCTGAAATTGTAGGAAAACGCATTCAAGTCAGATGTGATGGAAGTACCTTAATCAAATGCCACTTGGATGTTGCACAGAGAAACTACATAGAACATAAGCTC ]
[-] EMBL CD074190 [ CTTTTGTGAAGCAAAAGAAATGACTATAGGTAAAGAAAAAGCGGTCGTTATATATGTACCTGTTCCCCAACTACGGACATACCAGTTTATACATAACAGACTCGTAGGCGAGCTCGAAAAAAAGCTCCGTGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAAAATCATTGCAAAGCCTAAAAAAAATTGCAAATTTAATCCGAAGCAAAAGCGTCCTAAAAGTAGGACCCTAACAGCTGTGCCCGAAGCTATATTGAAAGATTTTGTTTACCCTGCTGAAATTGTAGGAAAACGCATTCAAGTCAGATGTGATGGAAGTCCCTTAATCAAATGCCCCTTGGATGTTGCCCAAAGAAACTACATAGAACATAAGCTCAAAACTATCCC GGGATTATACAAAAAG TTGAC GGGTAAAAACGTCCAGATCGAGTTTCCGGATTGGGTATTGTGAAAATATGTAATATAAGT ]
[-] EMBL SMAA40626 [ ACGGACATACCAGTTTATACATAACAGACTCGTAGGCGAGCTCGAAAAGAAGCTCCGTGGTCCTCATGTTGTGCTGTTGGCTTTCCGAAGAATCATCGCAAAGCCTAAAAGAAAATGCAAATTTAATCCGAAGCAAAAGCGNCCTAGAAGTAGGACCCTAACAGCTGTGCACGAAGCTATATTGAAAGATCTTGTTTACCCTGCTGAAATTGAAGGAAAANGCATTCAAGTCAGATGTGATGGAAGTACCTTAATCAAATCCNACTTGGATGTTGCACAGAGAAACTACATAGAACATAAGCTNAAAATTATCAC GGGATTATACAAAAAG TTGAC GGGTAAAGACGTCCAGATCGAGTTTCCGGATTGGGTATTGTGAAAATATGTAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||