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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9610#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 448 fasta sequence
[ATTGGATTCGAAAAATGGCTAGGACAAAGCAAACTGCAAGGAAGTCTACTGGTGGTAAAGCACCAAGGAAACAACTAGCAACCAAGGCTGCTCGTAAGTCTGCTCCGTCGACGGGTGGTGTCAAAAAACCTCATCGCTATCGTCCAGGGACTGTTGCTTTGCGAGAGATTCGTCGTTACCAAAAATCCACCGAGTTGTTAATACGGAAGTTGCCTTTCCAAAGACTTGTGCGCGAAATCGCTCAAGATTTTAAGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGTTGGTTTATTCGAGGATACAAACCTATGTGCAATTCATGCTAAACGGGTAACAATTATGCCAAAAGATATCCAGTTGGCCCGTCGCATTCGAGGTGAAAGAGCTTAAAATGTCATTCCAATAAATGTTGA]
[+] EMBL CD094878 [ATTGGATTCGAAAAATGGCTAGGACAAAGCAAACTGCAAGGAAGTCTACTGGTGGTAAAGCACCAAGGAAACAACTAGCAACCAAGGCTGCTCGTAAGTCTGCTCCGTCGACGGGTGGTGTCAAAAAACCTCATCGCTATCGTCCAGGGACTGTTGCTTTGCGAGAGATTCGTCGTTACCAAAAATCCACCGAGTTGTTAATACGGAAGTTGCCTTTCCAAAGACTTGTGCGCGAAATCGCTCAAGATTTTAAGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGTTGGTTTATTCGAGGATACAAACCTATGTGCAATTCATGCTAAACGGGTAACAATTATGCCAAAAGATATCCAGTTGGC ]
[+] EMBL CD095295 [ATTGGATTCGAAAAATGGCTAGGACAAAGCAAACTGCAAGGAAGTCTACTGGTGGTAAAGCACCAAGGAAACAACTAGCAACCAAGGCTGCTCGTAAGTCTGCTCCGTCGACGGGTGGTGTC AAAAACCTCATCGCTATCGTCCAGGGACTGTTGCTTTGCGAGAGATTCGTCGTTACCAAAAATCCACCGAGTTGTTAATACGGAAGTTGCCTTTCCAAAGACTTGTGCGCGAAATCGCTCAAGATTTTAAGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGTTGGTTTATTCGAGGATACAAACCTATGTGCAATTCATGCTAAACGGGTAACAATTATGCCAAAAGATATCCAGTTGGC ]
[+] EMBL CD128126 [ CTGCAAGGAAGTCTACTGGTGGTAAAGCACCAAGGAAACAACTAGCAACCAAGGCTGCTCGTAAGTCTGCTCCGTCGACGGGTGGTGTCAAAAAACCCCATCGCTATCGTCCAGGGACTGTTGCTTTGCGAGAGATTCGTCGTTACCAAAAATCCACCGAGTTGTTAATACGGAAGTTGCCTTTCCAAAGACTTGTGCGCGAAATCGCTCAAGATTTTAAGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGTTGGTTTATTCGAGGAT ]
[-] EMBL CD127823 [ TGCAAGGAAGTCTACTGGTGGTAAAGCACCAAGGAAACAACTAGCAACCAAGGCTGCTCGTAAGTCTGCTCCGTCGACGGGTGGTGTCAAAAAACCTCATCGCTATCGTCCAGGGACTGTTGCTTTGCGAGAGATTCGTCGTTACCAAAAATCCACCGAGTTGTTAATACGGAAGTTGCCTTTCCAAAGACTTGTGCGCGAAATCGCTCAAGATTTTAAGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGTTGGTTTATTCGAGGATA ]
[+] EMBL CD127453 [ nGGAAACAACTAGCAACCAAGGCTGCTCGTAAGTCTGCTCCGTCGACGGGTGGTGTCAAAAAACCCCATCGCTATCGTCCAGGGACTGTTGCTTTGCGAGAGATTCGTCGTTACCAAAAATCCACCGAGTTGTTAATACGGAAGTTGCCTTTCCAAAGACTTGTGCGCGAAATCGCTCAAGATTTTAAGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGTTGGTTTATTCGAGGAT ]
[-] EMBL CD138480 [ AAAAAACCTCATCGCTATCGTCCAGGGACTGTTGCTTTGCGAGAGATTCGTCGTTACCAAAAATCCACCGAGTTGTTAATACGGAAGTTGCCTTTCCAAAGACTTGTGCGCGAAGTCGCTCAAGATTTTAAGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGTTGGTTTATTCGAGGATACAAACCTATGTGCAATTCATGCTAAACGGGTAACAATAATGCCAAAAG ]
[+] EMBL CD146004 [ TGCTTTGCGAGAGATTCGTCGTTACCAAAAATCCACCGAGTTGTTAATACGGAAGTTGCCTTTCCAAAGACTTGTACGCGAAATCGCTCAAGATTTTAAGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGT ]
[-] EMBL SMAA43814 [ CCGAGTTGTTAATACGGAAGTTGCCTTTCCAAAGACTTGTGCGCGAAATCGCTCAAGATTTTAAGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGTTGGTTTATTCGAGGATACAAACCTATGTGCAATTCATGCTAAACGGGTAACAATTATGCCAAAAGATATCCAGTTGGCCCGTCGCATTCGAGGTGAAAGAGCTTAAAATGTCATTCCAATAAATGTTGA]
[+] EMBL CD145887 [ TTAATACGGAAGTTGCCTTTCCAAAGACTTGTGCGCGAAATCGCTCAAGGTTTTAAGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGTTGGTTTATTCGAGGATACAAACCTATGTGCAATTCATGCTAAACGGGTAACAATTATGCCAAAAGATATCCAGTTGGCC ]
[+] EMBL CD145884 [ AGACGGACCTACGTTTTCAGAGCGCTGCTGTTGGTGCCCTTCAAGAGGCAAGTGAGGCTTATCTAGTTGGTTTATTCGAGGATACAAACCTATGTGCAATTCATGCTAAACGGGTAACAATTATGCCAAAAGATATCCAGTTGGCC ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||