cluster # 9652

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Schistosoma mansoni
cluster # 9652 cluster # 9652 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9652#0 length = 936 sequences # 4
consensus_9652#1 length = 805 sequences # 2

consensus_9652#2 length = 798 sequences # 2
consensus_9652#3 length = 744 sequences # 2

consensusID : consensus_9652#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 936
fasta sequence

                              [GCCAANAATTTGGCACGAGGAACAATGCCAGCTAAACGAAGGTTTGCATCTCGCTTTCAACGGTATGGTTAGGATATAGATATTTCATATTTTAATGCAACTCACCATATCTTTAAATTAATCCCAATCCTCTTTCTAGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCT-GGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATAC-TGAAGCATAATACACTTTTAGGTACTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATCAAATCTC-A-AACCCACTTTGTACAGAATAAAGTCATTGTTTATTTATTCATCCGTTGCAAATAGAAGTTATTCTCACTAAAAAAAAAAAAAAAAAAA]

[+] EMBL CD079692             [GCCAANAATTTGGCACGAGGAACAATGCCAGCTAAACGAAGGTTTGCATCTCGCTTTCAACGGTATGGTTAGGATATAGATATTTCATATTTTAATGCAACTCACCATATCTTTAAATTAATCCCAATCCTCTTTCTAGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGT ATCCTGGGCG TC GAACGAANGTCTAGTCGATTATCAGTATACTTAAAGCAT ATACACTNNTANGTACTTGTATNTAATACATTTACATAAATACCATGTNAACACAGTCCCGTTGTAAATTGTATC AATCTC A AACCCACTTTG ACAGAAT AAGTCATT                                                            ]
[-] EMBL CD073951             [                                                                                                                                                                                                                                                 CTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCT GGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATAC TTAAGCATAATACACTTTTAGGTACTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATCAAATCTCGG AACCCACTTTGTACAAAATAAAGTCATTGTT                                                         ]
[-] EMBL CD073675             [                                                                                                                                                                                                                                                           GGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCT GGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATAC TGAAGCATAATACACTTTTAGGTACTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATCAAATCGC AGAACCCACTTTGTAAAAAATAAAGTCAT                                                             ]
[-] EMBL AI395039             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATAAAACTTCGAGTTCACTGGATCAGANTCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCT GGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATAC TGAAGCATAATACACTTTTAGGTACTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATCAAATCTC AGAACCCACTTTGTACAGAATAAAGTCATTGTTTATTTATTCATCCGTTGCAAATAGAAGTTATTCTCACTAAAAAAAAAAAAAAAAAAA]




>consensus_9652#0
GCCAANAATTTGGCACGAGGAACAATGCCAGCTAAACGAAGGTTTGCATCTCGCTTTCAA
CGGTATGGTTAGGATATAGATATTTCATATTTTAATGCAACTCACCATATCTTTAAATTA
ATCCCAATCCTCTTTCTAGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGG
CAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACA
GCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGG
AATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGT
CAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGA
TTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCA
AAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCGAC
CTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACT
GGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCG
CAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCTGG
CGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATAATACACTTTTAGGTA
CTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATC
AAATCTCAAACCCACTTTGTACAGAATAAAGTCATTGTTTATTTATTCATCCGTTGCAAA
TAGAAGTTATTCTCACTAAAAAAAAAAAAAAAAAAA

consensusID : consensus_9652#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 805
fasta sequence

                              [GAGCCATATTCGGCACGACGGCAAAAATGCCAGGTAAACGAAGGTTTGCATCTCGCTTTCCAACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTTAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCTGGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATAATACACTTTTAGGTACTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATCANATCTCAGAACCCACTNTGTACAGAATAAAGTCATTGT]

[+] EMBL CD081690             [GAGCCATATTCGGCACGACGGCAAAAATGCCAGGTAAACGAAGGTTTGCATCTCGCTTTCCAACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTTAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCTGGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATAATACACTTTTAGGTACTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATCANATCTCAGAACCCACTNTGTACAGAATAAAGTCATTGT]
[+] EMBL CD161805             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCTGGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGTATAATACACTTTTAGGTACTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATT                                             ]




>consensus_9652#1
GAGCCATATTCGGCACGACGGCAAAAATGCCAGGTAAACGAAGGTTTGCATCTCGCTTTC
CAACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGGCAAGTTGACAGCTA
CCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGG
CGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATG
TTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACG
TAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGT
CGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTT
CTAGTGTTAAAAAGAACTTAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAA
GTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACG
GATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCAAAAATGGTAACG
TTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCTGGCGTTCGGAACGAAA
GTCTAGTCGATTATCAGTATACTGAAGCATAATACACTTTTAGGTACTTGTATTTAATAC
ATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATCANATCTCAGAACCC
ACTNTGTACAGAATAAAGTCATTGT

consensusID : consensus_9652#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 798
fasta sequence

                              [AGCGGAGTATTTGGTAGTGCAAAAATGCCAGCTAAACGAAGGTTTGCATCTCGCTTTCCAACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCANAAATGGTAACGTTGTGGGGAATTCGAGCCATGGTTCCGTTTCTTTTAGTAATCCTGGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATANTACACTTTTAGGTACTTGTATTTAATACATTTACATAAATACCCATGTAACACAGTNCCGTTTGTAATTTGTATCAAATCTCAGAACCCACTTTGTACAGAATAAGTC]

[+] EMBL CD079402             [AGCGGAGTATTTGGTAGTGCAAAAATGCCAGCTAAACGAAGGTTTGCATCTCGCTTTCCAACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCANAAATGGTAACGTTGTGGGGAATTCGAGCCATGGTTCCGTTTCTTTTAGTAATCCTGGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATANTACACTTTTAGGTACTTGTATTTAATACATTTACATAAATACCCATGTAACACAGTNCCGTTTGTAATTTGTATCAAATCTCAGAACCCACTTTGTACAGAATAAGTC]
[-] EMBL CD127264             [                                                                                                                       CGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAGAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATAGTAGTGATGGCACGTCATCGAGCGaaatg                                                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_9652#2
AGCGGAGTATTTGGTAGTGCAAAAATGCCAGCTAAACGAAGGTTTGCATCTCGCTTTCCA
ACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGGCAAGTTGACAGCTACC
GTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGGCG
TATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTT
ATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTA
AAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCG
GATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCT
AGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGT
AAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGA
TCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATTCGCANAAATGGTAACGTT
GTGGGGAATTCGAGCCATGGTTCCGTTTCTTTTAGTAATCCTGGCGTTCGGAACGAAAGT
CTAGTCGATTATCAGTATACTGAAGCATANTACACTTTTAGGTACTTGTATTTAATACAT
TTACATAAATACCCATGTAACACAGTNCCGTTTGTAATTTGTATCAAATCTCAGAACCCA
CTTTGTACAGAATAAGTC

consensusID : consensus_9652#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 744
fasta sequence

                              [CTCGGAGCCAANATTCGGCACGAGGCGCTTTCCAACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAA-TTCGCANAAATGTAATCCTGGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATAATACACTNTTAGGTACTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATCAAATCTCAGAACCCACTTTGTACAGAAATAAGTCATTGTTTATTTATTN]

[+] EMBL CD080478             [CTCGGAGCCAANATTCGGCACGAGGCGCTTTCCAACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATCGGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAACAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAA TTCGCANAAATGTAATCCTGGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATAATACACTNTTAGGTACTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATCAAATCTCAGAACCCACTTTGTACAGAAATAAGTCATTGTTTATTTATTN]
[-] EMBL CD074389             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATTGTCAACAAACAAAGCCAGTAAAATTTCGCAAAAATGTAATCCTGGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATAATACACTTTTAGGTACTTGTATTTAATACATTTACATAAATACCATGTAAACACAGTCCGTTTGTAATTTGTATCAAATCTCAGAACCCACTTTGTACAGAATAAAGTCATTGTTTATTTATTc]




>consensus_9652#3
CTCGGAGCCAANATTCGGCACGAGGCGCTTTCCAACGACAAGAATAAAAAAAATCATGCA
ATTAGATGAAGAAATCGGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTT
AGAATTATTTCTCGAACAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTC
AAAAACAATAAGTCCCGGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATT
TTTGCGTTCCCTCGTTGTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTG
TTCTAAACTAAGTGCAGATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAG
CGTTGATGAAGTACACCAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAA
ACGAAAGCAGTCTCCGACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAA
TAAAACTTCGAGTTCACTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAA
CAAAGCCAGTAAAATTCGCANAAATGTAATCCTGGCGTTCGGAACGAAAGTCTAGTCGAT
TATCAGTATACTGAAGCATAATACACTNTTAGGTACTTGTATTTAATACATTTACATAAA
TACCATGTAAACACAGTCCGTTTGTAATTTGTATCAAATCTCAGAACCCACTTTGTACAG
AAATAAGTCATTGTTTATTTATTN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9652#0      GCCAANAATTTGGCACGAGGAACAATGCCAGCTAAACGAAGGTTTGCATCTCGCTTTCAA 60
consensus_9652#3      ------------------------------------------------------------
consensus_9652#1      ------------------------------------------------------------
consensus_9652#2      ------------------------------------------------------------
                                                                                  

consensus_9652#0      CGGTATGGTTAGGATATAGATATTTCATATTTTAATGCAACTCACCATATCTTTAAATTA 120
consensus_9652#3      --------------------------------------------CTCGGAGCCAANATTC 16
consensus_9652#1      --------------GAGCCATATTCGGCACGACGGCAAAAATGCCAGGTAAACGAAGGT- 45
consensus_9652#2      -------------AGCGGAGTATTTGGTA---GTGCAAAAATGCCAGCTAAACGAAGGT- 43
                                                                  *         *   * 

consensus_9652#0      ATCCCAATCCTCTTTCTA--GACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATC 178
consensus_9652#3      GGCACGAGGCGCTTTCCAACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATC 76
consensus_9652#1      -TTGCATCTCGCTTTCCAACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATC 104
consensus_9652#2      -TTGCATCTCGCTTTCCAACGACAAGAATAAAAAAAATCATGCAATTAGATGAAGAAATC 102
                          *    * ***** *  ****************************************

consensus_9652#0      GGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAA 238
consensus_9652#3      GGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAA 136
consensus_9652#1      GGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAA 164
consensus_9652#2      GGCAAGTTGACAGCTACCGTCCCTCCCGTTGTTTCACGTTCCTTAGAATTATTTCTCGAA 162
                      ************************************************************

consensus_9652#0      CAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCC 298
consensus_9652#3      CAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCC 196
consensus_9652#1      CAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCC 224
consensus_9652#2      CAGCTGCTTAATCGGGCGTATGAATTCACTGCAACTAGAAACTCAAAAACAATAAGTCCC 222
                      ************************************************************

consensus_9652#0      GGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTT 358
consensus_9652#3      GGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTT 256
consensus_9652#1      GGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTT 284
consensus_9652#2      GGAATTATTAAATATGTTATAGAACACGAGCCTCGCTTCACATTTTTGCGTTCCCTCGTT 282
                      ************************************************************

consensus_9652#0      GTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCA 418
consensus_9652#3      GTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCA 316
consensus_9652#1      GTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCA 344
consensus_9652#2      GTCAATATCCCAGACGTAAAGCCTAACAGTCGAAAGCAGAGCTGTTCTAAACTAAGTGCA 342
                      ************************************************************

consensus_9652#0      GATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACAC 478
consensus_9652#3      GATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACAC 376
consensus_9652#1      GATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACAC 404
consensus_9652#2      GATTCGGATGTTCAGTCGGATACTAGTGATGGCACGTCATCGAGCGTTGATGAAGTACAC 402
                      ************************************************************

consensus_9652#0      CAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCG 538
consensus_9652#3      CAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCG 436
consensus_9652#1      CAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTTAGGGCAAAAACGAAAGCAGTCTCCG 464
consensus_9652#2      CAAAGCACTGTGTCTTCTAGTGTTAAAAAGAACTCAGGGCAAAAACGAAAGCAGTCTCCG 462
                      ********************************** *************************

consensus_9652#0      ACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCA 598
consensus_9652#3      ACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCA 496
consensus_9652#1      ACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCA 524
consensus_9652#2      ACCTTTCGAAAAGTAAGTAAGCAGAGTCCTATCGGAGAGAATAATAAAACTTCGAGTTCA 522
                      ************************************************************

consensus_9652#0      CTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATT 658
consensus_9652#3      CTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATT 556
consensus_9652#1      CTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATT 584
consensus_9652#2      CTGGATCAGAATCACGGATCTGCTTTGGATTTATTGTCAACAAACAAAGCCAGTAAAATT 582
                      ************************************************************

consensus_9652#0      CGCAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCT 718
consensus_9652#3      CGCANAAATG-------------------------------------------TAATCCT 573
consensus_9652#1      CGCAAAAATGGTAACGTTGTGGGGAATTCGAGCAATGGTTCCGTTTCTTTTAGTAATCCT 644
consensus_9652#2      CGCANAAATGGTAACGTTGTGGGGAATTCGAGCCATGGTTCCGTTTCTTTTAGTAATCCT 642
                      **** *****                                           *******

consensus_9652#0      GGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATAATACACTTTTAGG 778
consensus_9652#3      GGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATAATACACTNTTAGG 633
consensus_9652#1      GGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATAATACACTTTTAGG 704
consensus_9652#2      GGCGTTCGGAACGAAAGTCTAGTCGATTATCAGTATACTGAAGCATANTACACTTTTAGG 702
                      *********************************************** ****** *****

consensus_9652#0      TACTTGTATTTAATACATTTACATAAATACC-ATGTAAACACAGTCC-GTTTGTAATTTG 836
consensus_9652#3      TACTTGTATTTAATACATTTACATAAATACC-ATGTAAACACAGTCC-GTTTGTAATTTG 691
consensus_9652#1      TACTTGTATTTAATACATTTACATAAATACC-ATGTAAACACAGTCC-GTTTGTAATTTG 762
consensus_9652#2      TACTTGTATTTAATACATTTACATAAATACCCATGTAA-CACAGTNCCGTTTGTAATTTG 761
                      ******************************* ****** ****** * ************

consensus_9652#0      TATCAAATCTCA-AACCCACTTTGTACAGAATAAAGTCATTGTTTATTTATTCATCCGTT 895
consensus_9652#3      TATCAAATCTCAGAACCCACTTTGTACAGAAATAAGTCATTGTTTATTTATTN------- 744
consensus_9652#1      TATCANATCTCAGAACCCACTNTGTACAGAATAAAGTCATTGT----------------- 805
consensus_9652#2      TATCAAATCTCAGAACCCACTTTGTACAGAATAA-GTC---------------------- 798
                      ***** ****** ******** *********  * ***                      

consensus_9652#0      GCAAATAGAAGTTATTCTCACTAAAAAAAAAAAAAAAAAAA 936
consensus_9652#3      -----------------------------------------
consensus_9652#1      -----------------------------------------
consensus_9652#2      -----------------------------------------