These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9661#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 607 fasta sequence [CCGAGCCAAAATTCGGCACGAGGGGTAAAATGCCCCTGGAACGCCTAGAAGATGAGGGTCTTGAAAAGATTCCTAACCTTAAGCTAGCACAATGGGCCTTTCGTGCTGGATTAGAGAAAACACCTGAACCTTTGCGTAAGCAGCTTCTGGAGAAAATTACCAAGTGTATCCAAGATGATAATATGGCTCCATACTACGAACTTGTGTGTAAAGAGCTTAATCTACCAGTTGACCAACGAATCTTGAAATCTATGCAGTCAGTAAATGAAGCAAAAATTAAGGAGTTAGATGCAAAGATTAAAGATGCGGAAGAGAATCTAGGTGATACAGAAATCAGAACCGCCATGATGGAAAAAGCTCACTATCTTAGTAAGATTGGTGACAAGGAAGGTTCTCTGTCCCAATTTCGACTGATTCTGGATAAAAGCTTAATGCCAGGCTTTCGATTAGACACAATTTTCCATATCATACGAATTGGATTCTTTTTTGGAGATAGGGATTTGATCACAAAGAATATAGAAAAAGCGAACAGCCTAATTGAAGAAGGTGGAGATTGCGATAGACGAAATCGACTTAAAGTTTACCGTGGNTTTATATAGTATGTCAG] [+] EMBL CD080330 [CCGAGCCAAAATTCGGCACGAGGGGTAAAATGCCCCTGGAACGCCTAGAAGATGAGGGTCTTGAAAAGATTCCTAACCTTAAGCTAGCACAATGGGCCTTTCGTGCTGGATTAGAGAAAACACCTGAACCTTTGCGTAAGCAGCTTCTGGAGAAAATTACCAAGTGTATCCAAGATGATAATATGGCTCCATACTATGAACTTGTGTGTAAAGAGCTTAATCTACCAGTTGACCAACGAATCTTGAAATCTATGCAGTCAGTAAATGAAGCAAAAATTAAGGAGTTAGATGCAAAGATTAAAGATGCGGAAGAGAATCTAGGTGATACAGAAATCAGAACCGCCATGATGGAAAAAGCTCACTATCTTAGTAAGATTGGTGACAAGGAAGGTTCTCTGTCCCAATTTCGACTGATTCTGGATAAAAGCTTAATGCCAGGCTTTCGATTAGACACAATTTTCCATATCATACGAATTGGATTCTTTTTTGGAGATAGGGATTTGATCACAAAGAATATAGAAAAAGCGAACAGCCTAATTGAAGAAGGTGGAGATTGCGATAGACGAAATCGACTTAAAGTTTACCGTGGNTTTATATAGTATGTCAG] [+] EMBL AI068289 [ ATGCCCCTGGAACGCCTAGAAGATGAGGGTCTTGAAAAGATTCCTAACCTTAAGCTAGCACAATGGGCCTTTCGTGCTGGATTAGAGAAAACACCTGAACCTTTGCGTAAGCAGCTTCTGGAGAAAATTACCAAGTGTATCCAAGATGATAATATGGCTCCATACTACGAACTTGTGTGTAAAGAGCTTAATCTACCAGTTGACCAACGAATCTTGAAATCTATGCAGTCAGTAAATGAAGCAAAAATTAAGGAGTTAGATGCAAAGATTAAAGATGCGGAAGAGAATCTAGGTGATACAGAAATCAGAACCGCCATGATGGAAAAAGCTCACTATCTTAGTAAGATTGGTGACAAGGAAGGTTCTCTGTCNCAATTTC ] [+] EMBL AI068039 [ ATGCCCCTGGAACGCCTAGAAGATGAGGGTCTTGAAAAGATTCCTAACCTTAAGCTAGCACAATGGGCCTTTCGTGCTGGATTAGAGAAAACACCTGAACCTTTGCGTAAGCAGCTTCTGGAGAAAATTACCAAGTGTATCCAAGATGATAATATGGCTCCATACTACGAACTTGTGTGTAAAGAGCTTAATCTACCAGTTGACCAACGAATCTTGAAATCTATGCAGTCAGTAAATGAAGCAAAAATTAAGGAGTTAGATGCAAAGATTAAAGATGCGGAAGAGAATCTAGGTGATACAGAAATCAGAACCGCCATGATGGAAAAAGCTCACTATCTTAGTAAGATTGGTGACAAGGAAGGTTCTCTGTCCCAATTTCGACTGATTCTGGATAAAAGCTTAATGCCAGGCTTTCGATTAGACACAATTTTCCATATCATACGAATTG ] [+] EMBL AI068176 [ ATGCCCCTGGAACGCCTAGAAGATGAGGGTCTTGAAAAGATTCCTAACCTTAAGCTAGCACAATGGGCCTTTCGTGCTGGATTAGAGAAAACACCTGAACCTTTGCGTAAGCAGCTTCTGGAGAAAATTACCAAGTGTATCCAAGATGATAATATGGCTCCATACTACGAACTTGTGTGTAAAGAGCTTAATCTACCAGTTGACCAACGAATCTTGAAATCTATGCAGTCAGTAAATGAAGCAAAAATTAAGGAGTTAGATGCAAAGATTAAAGATGCGGAAGAGAATCTAGGTGATACAGAAATCAGAACCGCCATGATGGAAAAAGCTCACTATCTTAGTAAGATTGGTGACAAGGAAGGTTCTCTGTCCCAATTTCGACTGATTCTGGATAAAAGCTTAATGCCAGGCT ] [+] EMBL AI067200 [ TGCCCCTGGAACGCCTAGAAGATGAGGGTCTTGAAAAGATTCCTAACCTTAAGCTAGCACAATGGGCCTTTCGTGCTGGATTAGAGAAAACACCTGAACCTTTGCGTAAGCAGCTTCTGGAGAAAATTACCAAGTGTATCCAAGATGATAATATGGCTCCATACTACGAACTTGTGTGTAAAGAGCTTAATCTACCAGTTGACCAACGAATCTTGAAATCTATGCAGTCAGTAAATGAAGCAAAAATTAAGGAGTTAGATGCAAAGATTAAAGATGCGGAAGAGAATCTAGGTGATACAGAAATCAGAACCGCCATGATGGAAAAAGCTCACTATCTTAGTAAGATTGGTGACAAGGAAGGTTCTCTGTCCCAATTTCGACTGATTCTGGATAAAAGCTTAATGCCAGGCTTTCGATTAGACACAATTTTCCATATCATACGAATTGGATTCTTTTTTGGAGATAGGGATTTGATCACAAAGAATATAGAAAAAGCGAACAGCCTA ] [+] EMBL AI067786 [ TGCCCCTGGAACGCCTAGAAGATGAGGGTCTTGAAAAGATTCCTAACCTTAAGCTAGCACAATGGGCCTTTCGTGCTGGATTAGAGAAAACACCTGAACCTTTGCGTAAGCAGCTTCTGGAGAAAATTACCAAGTGTATCCAAGATGATAATATGGCTCCATACTACGAACTTGTGTGTAAAGAGCTTAATCTACCAGTTGACCAACGAATCTTGAAATCTATGCAGTCAGTAAATGAAGCAAAAATTAAGGAGTTAGATGCAAAGATTAAAGATGCGGAAGAGAATCTAGGTGATACAGAAATCAGAACCGCCATGATGGAAAAAGCTCACTATCTTAGTAAGATTGG ] [+] EMBL CD167242 [ ATACTATGAACTTGTGTGTGAAGAGCTTAATCTACCAGTTGACCAACGAATCTTGGAATCTATGCAGTCAGTAAATGAAGCAAAAATTAAGGAGTTAGATGCCAAGATTTAAGATGCGGAAGAGAATCTAGGTGATACAGAAATCAGAACCGCCATGATGGAAAAAGCTCACTATCTTAGTAAGATTGGTGACCAGGAAGGTTCTCTGTCCCAATTTCGACTGATTCTGG ] [+] EMBL CD131476 [ TATGAACTTGTGTGTAAAGAGCTTAATCTACCAGTTGACCAACGAATCTTGAAATCTATGCAGTCAGTAAATGAAGCAAAAATTAAGGAGTTAGATGCAAAGATTAAAGATGCGGAAGAGAATCTAGGTGATACAGAAATCAGAACC ] [+] EMBL CD133918 [ ACCAGTTGACCAACGAATCTTGAAATCTATGCAGTCAGTAAATGAAGCAAAAATTAAGGAGTTAGATGCAAAGATTAAAGATGCGGAAGAGAATCTAGGTGATACAGAAATCAGAACCGCCATGATGGAAAAAGCTCACTATCTTAGTAAGATTGGTGACAAGGAAGGTTCTCTGTCCCAATTTCGACTGATTCTGGATAAAAGCTTAATGCCAGGCTTTCGATTAGACACAATTTTCCATATCATACGAATTGGATTCTTTTTTGGAGATAGGG ] [+] EMBL CD167302 [ AGAGAATCTAGGTGATACAGAAATCAGAACCGCCATGATGGAAAAAGCTCACTATCTTAGTAAGATTGGTGACAAGGAAGGTTCTCTGTCCCAATTTCGACTGATTCTGGATCAAAGCTTAATGCCAGGCTTTCGATTAGACACAATTTTCCATATCATACGAATTGGATTCTTTTTTGGAGATAGGGATTTGATCACAAAGAATATAGAAAAAGCGAACAGCCTAATTGAAGAAGGTGGAGATTGGGATAGACG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||