These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9667#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 890 fasta sequence [ACATCCACACTGGTTCTCGGACGGGTTGACACATTTTCTGAAAAAAGAACGGGAACCTGAAATCCCGTATCTTGATGAAGAGATCTTTTTGGTAATTCGAATTCATAAAAACAAGTAGTATGAGAGCCAACCGTACAGAACTTATGTTTAGTCGGTGATAATGAAACTGTTCCGATTTGCAAGTTTTTCATATGCGAAGATTTCCCATTCAAACACTTTTTTTGTAGATCCATACTCAGAGGATTAGAACTAAACATTTGTTTACAGTTATTTGTTTGTATTGGATGGTTACAACTATTATTCAGCTTGCCACATTTTGGTGGTCTAGAAATGCCAATATCTTCATATTTATTTACAGCAGTCATTCGATTTCGTTTCATGTTGGATTCACTACTTGGGATGGGATTAGTTACATGGGAGTTCGTCGAACTACACCTAACTTTTATAGTCTCGATAAAATCTCGATAAGAAGAATGGATGGAATCTCGGTCGGAAGACGTAGGAAGAATAATATCAGCAATT-TGATTTTCTGGTGTTGATATCTCACGTCTAAGAAGTTCGTCCAGTTTTTGTTCTCGTTCCGAAGAATAAGAGTTCAACGT-CAATACA-GGTGCTTTGACCGGTTGAAATAAACATACAGGGATAACTGGAGAATGTTCAGACATTTTTTT-GGTCGAAGTGACAGGTAACTTCGCAGCAGCAGCTGCTGCTAGTGCAGTTGCTTGCAGATTACGTTGTATTTGTTCACGCTTCTCTTTTTCGGCTTCCAGTTGCCGTTTATGCTCTTGTTTTCGAGCTTCCCTTTGTTGTTGGACCAGGGCCTTAAGATGAGCTCTAGGTGTAGGACAGCCATAAATATCTTTTTGCACAGATCCGAGAGCATAGACGGA] [+] EMBL CD067267 [ACATCCACACTGGTTCTCGGACGGGTTGACACATTTTCTGAAAAAAGAACGGGAACCTGAAATCCCGTATCTTGATGAAGAGATCTTTTTGGTAATTCGAATTCATAAAAACAAGTAGTATGAGAGCCAACCGTACAGAACTTATGTTTAGTCGGTGATAATGAAACTGTTCCGATTTGCAAGTTTTTCATATGCGAAGATTTCCCATTCAAACACTTTTTTTGTAGATCCATACTCAGAGGATTAGAACTAAACATTTGTTTACAGTTATTTGTTTGTATTGGATGGTTACAACTATTATTCAGCTTGCCACATTTTGGTGGTCTAGAAATGCCAATATCTTCATATTTATTTACAGCAGTCATTCGATTTCGTTTCATGTTGGATTCACTACTTGGGATGGGATTAGTTACATGGGAGTTCGTCGAACTACACCTAACTTTTATAGTCTGGATAAAATCTCGATAAGAAGAAT ] [+] EMBL CD067026 [ACATCCACACTGGTTCTCGGACGGGTTGACACATTTTCTGAAAAAAGAACGGGAACCTGGAATCCCGTATCTTGATGAAGAGATCTTTTTGGTAATTCGAATTCATAAAAACAAGTAGTATGAGAGCCAACCGTACAGAACTTATGTTTAGTCGGTGATAATGAAACTGTTTCGATTTGCAAGTTTTTCATATGCGAAGATTTCCCATTCAAACACTTTTTTTGTAGATCCATACTCAGAGGATTAGAACTAAACATTTGTTTACAGTTATTTGTTTGTATTGGATGGTTACAACTATTATTCAGCTTGCCACATTTTGGTGGTCTAGAAATGCCAATATCTTCATATTTATTTACAGCAGTCATTCGATTTCGTTTCATGTTGGATTCACTAGTTGGGATGGGATTAGTTACATGGGAGTTCGTCGAACTACACCTAACTTTTATAG ] [-] EMBL CD112301 [ TGGGAGTTCGTCGAACTACACCTAACTTTTATAGTCTCGATAAAATCTCGATAAGAAGAATGGATGGAATCTCGGTCGGAAGACGTAGGAAGAATAATATCAGCAATT TGATTTTCTGGTGTTGATATCTCACGTCTAAGAAGTTCGTCCAGTTTTTGTTCTCGTTCCGAAGAATAAGAGTTCAACGT CAATACA GGTGCTTTGACCGGTTGAAATAAACATACAGGGATAACTGGAGAATGTTCAGACATTTTTTT GGTCGAAGTGACAGGTAACTTCGCAGCAGCAGCTGCTGCTAGTGCAGTTGCTTGCAGATTACGTTGTATTTGTTCACGCTTCTCTTTTTCGGCTTCCAGTTGCCGTTTATGCTCTTGTTTTC ] [-] EMBL CD112287 [ TGGGAGTTCGTCGAACTACACCTAACTTTTATAGTCTCGATAAAATCTCGATAAGAAGAATGGATGGAATCTCGGTCGGAAGACGTGGGAAGAATAATATCAGCAATT TGATTTTCTGGTGTTGATATCTCACGTCTAAGAAGTTCGTCCAGTTTTTGTTCTCGTTCCGAAGAATAAGAGTTCAACGT CAATACA GGTGCTTTGACCGGTTGAAATAAACATACAGGGATAACTGGAGAATGTTCAGACATTTTTTTGGGTCGAAGTGACAGGTAACTTCGCAGCAGCAGCTGCTGCTAGTGCAGTTGCTTGCAGATTACGTTGTATTTGTTCACGggt ] [+] EMBL CD062465 [ AGACGTAGGAAGAATAATATCAGCAATTATGATTTTCTGGTGTTGATATCTCACGTCTAAGAAGTTCGTCCAGTTTTTGTTCTCGTTCCGAAGAATAAGAGTTCAACGT CGATACATGGTGCTTTGATCGGGTGAAATACACATACAGGGATAACTGGAGAATGTTCAGACATTTTTTA GGTCGAAGTGACAGGTAACTTCGCGGCAGCAGCTGCTGCTAGTGCAGTTGCTTGCAGATTACGTTGTATTAGTTCACGCTTCTCTTTTTCGGCTTCCAGTTGCCGTTTATGCTCTTGTATTCGA ] [-] EMBL CD119581 [ CCAGTTTTTGTTCTCGTTCCGAAGAATAAGAGTTCAACGT CAATACA GGTGCTTTGACCGGTTGAAATAAACATACAGGGATAACTGGAGAATGTTCAGACATTTTTTT GGTCGAAGTGACAGGTAACTTCGCAGCAGCAGCTGCTGCTAGTGCAGTTGCTTGCAGATTACGTTGTATTTGTTCACGCTTCTCTTTTTCGGCTTCCAGTTGCCGTTTATGCTCTTGTTTTCGAGCTTCCCTTTGTTGTTGGACCAGGGCCTTAAGATGAGCTCTAGGTGTAGGACAGCCATAAATATCTTTTTGCACAGAT ] [-] EMBL CD119464 [ CCAGTTTTTGTTCTCGTTCCGAAGAATAAGAGTTCAACGT CAATACA GGTGCTTTGACCGGTTGAAATAAACATACAGGGATAACTGGAGAATGTTCAGACATTTTTTT GGTCGAAGTGACAGGTAACTTCGCAGCAGCAGCTGCTGCTAGTGCAGTTGCTTGCAGATTACGTTGTATTTGTTCACGCTTCTCTTTTTCGGCTTCCAGTTGCCGTTTATGCTCTTGTTTTCGAGCTTCCCTTTGTTGTTGGACCAGGGCCTTAAGATGAGCTCTAGGTGTAGGACAGCCATAAATATCTTTTTGCACAGAT ] [-] EMBL CD119435 [ CAGTTTGT TTCTCG TCCGAAGAATAAGAGTTC ACGTNCAATACA GGTGCTTTGACCGGTTGAAATAAACATACAGGGATAACTGGAGAATGTTCAGACATTTTTTT GGTCGAAGTGACAGGTAACTTCGCAGCAGCAGCTGCTGCTAGTGCAGTTGCTTGCAGATTACGTTGTATTTGAAAAAGCTTCTCTTTTTCGGCTTCCAGTTGCCGTTTATGCTCTTGTTTTCGAGCTTCCCTTTGTTATTGGACCAGGGCCTTAAGATGAGCTCTAGGTGTAGGACAGCCATAAATATCTTTTTGCACAGATCCGAGAGCATAGACGGA] [-] EMBL CD119555 [ CTCGTT CGAGAAATAAGAGTTCAACGT CAATACA GGTGCTTTGACCGGTTGAAATAAACATACAGGGATAACTGGAGAATGTTCAGACATTTTTTT GGTCGAAGTGACAGGTAACTTCGCAGCAGCAGCTGCTGCTAGTGCAGTTGCTCGCAGATTACGTTGTATTTGTTCACGCTTCTCTTTTTCGGCTTCCAGTTGCCGTTTATGCTCTTGTTTTCGAGCTTCCCTTTGTTGTTGGACCAGGGCCTTAAGATGAGCTCTAGGTGTAGGACAGCCATAAATATCTTTTTGCACAGAT ] [+] EMBL CD119384 [ TACA GGTGCTTTGACCGGATGATATAAACATACAGGGATTACTGGAGAATGTTCAGACATTTTTTT GGACGAAGCGACAGGTAACTTCGCAGCAGCAGCTGCTGCTAGTGCAGTTGCTTGCAGATTACGGTGTATTTGCTCACGCTTCTCTTTTTCGGCTTCCAGTTGCCGTTTATGCTCTTGTTTTCGAGCTTCCCTTTGTTGTTGGACCAGGGCCTTAAGATGAGCTCTAGGTGTAGGACAGCCATATATATCTTTCTGCACAGA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||