These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9669#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 751 fasta sequence [CGCTAATAAAAATGGACCCTTATGGAGCAGTATCGGCAGATCTATTCGATATACCAGCTGCGGAACAAGAAATAACTGTTGGGTCTAATGATCAA-CCAATTGTATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCACGTGTTCTTACCATCCGTCCTCAGTTATCATCTGGTCCCACAGTCTTGACTGGTGCTACCGCTATTACACCTGTGAGACCTGGCACGCTGATTTTTTCTGGTGCTTCATCAACACAGTTCACAGGATCTCCAGTCAGCTATCAAAGTTCTGAGGATGTTGAAAAT-AAATGATTATAGGGTCTGGGAGGTGAAATTATTAATGGAGCTCCTCACGGTGTACTTACACTTTCTGGTTATTACGATATAAATATGCATAATGCCGCTGGCTTCGACACTCGGCTAGT] [+] EMBL CD187032 [CGCTAATAAAAATGGACCCTTATGGAGCAGTATCGGCAGATCTATTCGATATACCAGCTGCGGAACAAGAAATAACTGTTGGGTCTAATGATCAA CCAATTGTATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCT ] [+] EMBL AW017220 [ ATGGAGCAGTATCGGCAGATCTATTCGATATACCAGCTGCGGAACAAGAAATAACTGTTGGGTCTAATGATCAA CCAATTGTATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACGTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAGTGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCACGTGTTCTTACCATCCGTCCTCAGTTATCATCTGGTCCCACAGTCTTGACTGGTGCTACCGCTATTACACCTGTGAGACCT ] [+] EMBL BF936694 [ AGCTGCGGAACAAGAAATAACTGTTGGGTCTAATGATCAA CCAATTGTATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACGTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAGTGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCACGTGTTCTTACCATCCGTCCTCAGTTATCATCTGGTCCCACAGTCTTGACTGGTGCTACCGCTATTACACCTGTGAGACCTGGCACGCTGATTTTTTCTGGTGCTTCATCAACACAGTTCACAGGATCTCCAGTCAGCTATCAAAGTTCTGAGGATGTTGAAAAT AAATGATTATAGGGTCTGGGAGGTGAAATTATTAATGGAGCTCCTCACGGTGTACTTACACTTTCTGGTTATTACGATATAAATATGCATAATGCCGCTGGCTTCGACACTCGGCTAGT] [+] EMBL CD068973 [ AGAAATAACTGTTGGGTCTAATGATCAAGCCAATAGTATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCC ] [-] EMBL CD194144 [ TATCAGGAAATTCAAATTTATCAGGAGTCGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTGTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAACCCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCA ] [-] EMBL CD194140 [ TATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTGTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCC ] [-] EMBL CD179101 [ TGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCAC ] [+] EMBL CD185919 [ AGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAA ] [+] EMBL CD162816 [ CAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCACGTGTTCTTACCATCCGTCCTCAGTTATCATCTGGTCCCACAGTCTTGACTGGTGCTACCGCTATTACACCTGTGAGACCTGGCACGCTGATTTTTTCTGGTGCTTCATCAACACAGTTCACAGGATCTCCAGTCAGCTATCAAAGTTCTGAGGATGTTGAAAATCAAATG ] [-] EMBL CD180982 [ AATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCACGTGTTCTTACCATCCGTCCTCAGTTATCATCTGGTCCCACAGTCTTGACTGGTGCTACCGCTATTACACCTGTGAGACCTGGCACGCTGATTTTTTCTGGTGCTTCATCAACACAGTTCACAGGATCTCCAGTCAGCTATCAAAGTTCTGAGGATGTTGAAAATCAAATGA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||