These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9697#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 737 fasta sequence [TGAAGGATTAATAGCCACCTTTCCAAAGCTTCTTGGGACAGGTAAACAGCATACATTTGTGGAAACAGAATCTGTGCGGTATGTTTACCAACC-GTTGGAAAAATTGTATGTTCTTCTGATTACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGTGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACAAATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTG-TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTTAAAAAGCATTGATCAGTTTGTAAATCGTCTAAAAGCTGAAGGTGAAGTGGTCAATGAAGATGTTATGAAATTAGTTA] [+] EMBL CD161478 [TGAAGGATTAATAGCCACCTTTCCAAAGCTTCTTGGGACAGGTAAACAGCATACATTTGTGGAAACAGAATCTGTGCGGTATGTTTACCAACC GTTGGAAAAATTGTATGTTCTTCTGATTACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGTGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACAAATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTA ] [+] EMBL CD191401 [ AGGATTAATAGCCACCTTTCCAAAGCTTCTTGGGACAGGTAAACAGCATACATTTGTGGAAACAGAATCTGTGCGGTATGTTTACCAACCNGTTGGAAAAATTGTATGTTCTTCTGATTACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGTGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACAAATTCGAACATATACGGAAATGGAC ] [-] EMBL CD190635 [ AACAGCATACATTTGTGGAAACAGAATCTGTGCGGTATGTTTACCAACC GTTGGAAAAATTGTATGTTCTTCTGATTACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGTGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACAAATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAAC ] [+] EMBL AI067727 [ TTTGTGGAAACAGAATCTGTGCGGTATGTTTACCAACC GTTGGAAAAATTGTATGTTCTTCTGATTACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGTGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACAAATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAAGTGGTATGAATCTCTCAAGATTCTCNAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCANATGATTT ] [+] EMBL CD180783 [ GCTGTTCGCACGTGAGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGAATTTGATGAAATCATAGCTCTAGGCTATAGACAATATGGTAACCTGTCACAAATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTGATACAGGACAACAAAGAACGTGATGCGAAAGAGCATATGAAACAGAGAGCACGTGAACTACAACAAGCTCAACTAGAAGCTGGAAAGCGCTCATGTGGTATGAATCTCTCAAGATTCTCCAATTATCGAGGCGGTAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGACGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCATCTATCTTAGCATCATTGAAACGAAGCGGT ] [-] EMBL CD144884 [ AGATGTTAACCTGTCACAAATTCGAANATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGAGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAA ] [-] EMBL CD196101 [ ATGGACTCACATGATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTTAAAAAGCATTGATCAGTTTGTAAATCG ] [-] EMBL CD154837 [ ATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTTAAAAAGCATTGATCAGTTTGTAAATCGTCTAAAAGCTGAAGGTGAAGTGGTCAATGAAGATGTTATGAAAT ] [-] EMBL CD162732 [ TGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGAGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTA ] [-] EMBL CD184540 [ TGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATNATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTTAAAAAGCATTGATCAGTTTGTAAATCGTCTAAAAGCTGAAGGTGAAGTGGTCAATGAAGATGTTATGAAATTAGTTA] [+] EMBL CD071066 [ GCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTTAAAAAGCATTGATCAGTTTGTAAATCGTCTAAAAGCTGAAGGTGAAGTGGTCAATGAAGATGTTATGAAATTAGT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||