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Schistosoma mansoni
cluster # 9697 cluster # 9697       Sequences # 11       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9697#0 length = 737 sequences # 11  

consensusID : consensus_9697#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 737
fasta sequence
                              [TGAAGGATTAATAGCCACCTTTCCAAAGCTTCTTGGGACAGGTAAACAGCATACATTTGTGGAAACAGAATCTGTGCGGTATGTTTACCAACC-GTTGGAAAAATTGTATGTTCTTCTGATTACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGTGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACAAATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTG-TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTTAAAAAGCATTGATCAGTTTGTAAATCGTCTAAAAGCTGAAGGTGAAGTGGTCAATGAAGATGTTATGAAATTAGTTA]

[+] EMBL CD161478             [TGAAGGATTAATAGCCACCTTTCCAAAGCTTCTTGGGACAGGTAAACAGCATACATTTGTGGAAACAGAATCTGTGCGGTATGTTTACCAACC GTTGGAAAAATTGTATGTTCTTCTGATTACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGTGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACAAATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTA                                                                                                                                                      ]
[+] EMBL CD191401             [   AGGATTAATAGCCACCTTTCCAAAGCTTCTTGGGACAGGTAAACAGCATACATTTGTGGAAACAGAATCTGTGCGGTATGTTTACCAACCNGTTGGAAAAATTGTATGTTCTTCTGATTACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGTGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACAAATTCGAACATATACGGAAATGGAC                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD190635             [                                            AACAGCATACATTTGTGGAAACAGAATCTGTGCGGTATGTTTACCAACC GTTGGAAAAATTGTATGTTCTTCTGATTACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGTGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACAAATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAAC                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AI067727             [                                                       TTTGTGGAAACAGAATCTGTGCGGTATGTTTACCAACC GTTGGAAAAATTGTATGTTCTTCTGATTACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGTGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACAAATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAAGTGGTATGAATCTCTCAAGATTCTCNAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCANATGATTT                                                                                                                                                                                                                             ]
[+] EMBL CD180783             [                                                                                                                                                                      GCTGTTCGCACGTGAGATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACTTATTTTCGAATTTGATGAAATCATAGCTCTAGGCTATAGACAATATGGTAACCTGTCACAAATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTGATACAGGACAACAAAGAACGTGATGCGAAAGAGCATATGAAACAGAGAGCACGTGAACTACAACAAGCTCAACTAGAAGCTGGAAAGCGCTCATGTGGTATGAATCTCTCAAGATTCTCCAATTATCGAGGCGGTAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGACGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCATCTATCTTAGCATCATTGAAACGAAGCGGT                                                                                                          ]
[-] EMBL CD144884             [                                                                                                                                                                                                                                                                                           AGATGTTAACCTGTCACAAATTCGAANATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGAGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAA                                                                                                                   ]
[-] EMBL CD196101             [                                                                                                                                                                                                                                                                                                                                ATGGACTCACATGATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTTAAAAAGCATTGATCAGTTTGTAAATCG                                                  ]
[-] EMBL CD154837             [                                                                                                                                                                                                                                                                                                                                             ATGAACGCGTGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTTAAAAAGCATTGATCAGTTTGTAAATCGTCTAAAAGCTGAAGGTGAAGTGGTCAATGAAGATGTTATGAAAT      ]
[-] EMBL CD162732             [                                                                                                                                                                                                                                                                                                                                                      TGTTCCGTGCTG TACAGGAGAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGAGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTA                                                                                                         ]
[-] EMBL CD184540             [                                                                                                                                                                                                                                                                                                                                                                                      TGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGCTCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATNATCGTGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGTGAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTTAAAAAGCATTGATCAGTTTGTAAATCGTCTAAAAGCTGAAGGTGAAGTGGTCAATGAAGATGTTATGAAATTAGTTA]
[+] EMBL CD071066             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCCTACTACAAATACAGCAACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTTAAAAAGCATTGATCAGTTTGTAAATCGTCTAAAAGCTGAAGGTGAAGTGGTCAATGAAGATGTTATGAAATTAGT  ]


>consensus_9697#0 TGAAGGATTAATAGCCACCTTTCCAAAGCTTCTTGGGACAGGTAAACAGCATACATTTGT GGAAACAGAATCTGTGCGGTATGTTTACCAACCGTTGGAAAAATTGTATGTTCTTCTGAT TACTACGAAAGCTAGCAATATACTGGAAGATTTGGAGACATTACGGCTGTTCGCACGTGT GATACCGGAATATGCTTGTGGTACCGATGAAAACGATGTACTGACACATGCTTTCCAACT TATTTTCGCATTTGATGAAATCATAGCTCTAGGCTATAGAGAAGATGTTAACCTGTCACA AATTCGAACATATACGGAAATGGACTCACATGATGAACGCGTGTTCCGTGCTGTACAGGA GAACAAAGAACGTGATGCGAAAGAGCAGATGAAACAGAGAGCACGTGAACTACAACAAGC TCGACTAGAAGCTGGAAAGCGCTCAGGTGGTATGAATCTCTCAGGATTCTCCAATTATCG TGGTGGGAAAGGAATGGGAGGTCTGTCAAATGATTTAAATGAACCTCGTGTAATCGTCGT GAAAGATCGTTTGGGAGATGGGAATACAGATATTCAAAGTTTGCCTACTACAAATACAGC AACTATCTTAGCATCAGTGAAACGAAGTGGTATGCAACTTGGTGGTGGACAGGGTGGTTT AAAAAGCATTGATCAGTTTGTAAATCGTCTAAAAGCTGAAGGTGAAGTGGTCAATGAAGA TGTTATGAAATTAGTTA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)