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Schistosoma mansoni
cluster # 9712 cluster # 9712       Sequences # 11       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9712#0 length = 872 sequences # 5  
consensus_9712#1 length = 571 sequences # 3  
consensus_9712#2 length = 486 sequences # 1  
consensus_9712#3 length = 384 sequences # 1  
consensus_9712#4 length = 366 sequences # 1  

consensusID : consensus_9712#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 872
fasta sequence
                              [TTTTTTTTTTTTTTTTTAATATTCAATAAGTTTTATTTTCTTACAGTGAGGTTAACAAATTAATTGTATATCATACAAAAAAGTAGTAAGGTTGAATTTTTTACAAAAGACAGTGTTATATACAATGAAACACTTTTGACCGACATTCACTTAACACTTAACAGTTGGGTATTCCCGAACCAGCCTGGAGAAAATATGTTAACCCATGCCGTTTTGAGAACATTAGTTGTTTCGACGAAGAATTTTAATCTCAATAAAATCAGTAACTTTCAATCTGTATGAAATAAAATATCACTGCACAAAATAAAGTCCTCCTAAAGATGTATTTGCACGAGATAAATATTCACATGATCAATTGTCGTGAACCACACAAACTAGTTTACTGCCTTTTGCATGGTCTGTAGAACTTTCTGAGCGTGAGAAACAGCAGAATCAAACAAAACATTCCACGAGTTGACTACATCAC-TTTCATTTGTACTCGCCACAAA-TAAATTGTCCCACAAACCCGTTAAAAATGCATTGATCACAGAAAGATCGACGATAGCACCCTGAGAAACAGTTATGTGTACTGGGCCAGCATCCGTATCCCAAATATCTAACTCTCGTTTCGTTGGTTGGGCAATAATAGGGACTGTCTTTGACTTTCTATCAGCAACCGGGCGAGGAACGAAGCAGAAAGACAGCGAAACAGGCCATTCATTCACTTTTAAGGATATTGTCTCATTTAATGGTCCTGGTTTATATAATTCTAAGTAGGATCCCGCAGCTTGTTCATCCGTAACCGCATATAACTTTGTCCATTTTGTTGTACAAAGACTAACAAGTGCAGCGGGGACACAAGCATCTAGTAAGCACCCATCGTCCTCGTGACG]

[+] EMBL AI395087             [TTTTTTTTTTTTTTTTTAATATTCAATAAGTTTTATTTTCTTACAGTGAGGTTAACAAATTAATTGTATATCATACAAAAAAGTAGTAAGGTTGAATTTTTTACAAAAGACAGTGTTATATACAATGAAACACTTTTGACCGACATTCACTTAACACTTAACAGTTGGGTATTCCCGAACCAGCCTGGAGAAAATATGTTAACCCATGCCGTTTTGAGAACATTAGTTGTTTCGACGAAGAATTTTAATCTCAATAAAATCAGTAACTTTCAATCTGTATGAAATAAAATATCACTGCACAAAATAAAGTCCTCCTAAAGATGTATTTGCACGAGATAAATATTCACATGATCAATTGTCGTGAg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD073996             [                          TAAGTTTTATTTTCTTACAGTGAGGTTAACAAATTAATTGTATATCATACAAAAAAGTAGTAAGGTTGAATTTTTTACAAAAGACAGTGTTATATACAATGAAACACTTTTGACCGACATTCACTTAACACTTAACAGTTGGGTATTCCCGAACCAGCCTGGAGAAAATATGTTAACCCATGCCGTTTTGAGAACATTAGTTGTTTCGATGAAGAATTTTAATCTCAATAAAATCAGTAACTTTCAATCTGTATGAAATAAAATATCACTGCACAAAATAAAGTCTTCTTATAGATGTATTTGCACGAGATAAATATTCACATGATCAATTGTCGTGAACCACACAAACTAGTTTACTGCCTTTTGCATGGTCTGTAGAACTTTCTGAGCGTGAGAAACAGCAGAATCAAACAAAACATTCCACGCGTTGACTACATCAC TTTCATTTGTACTCGCTACAAA TAAATTGTCCCACAAACCCGTTAAAAATGCATTGATCACAGAAAGATCGACGATAGCACCCTGAGAAACAGTTATGTGTACTGGGCCAGCATCCGTATCCCAAATATCTAACTCTCGTTTCGTTGGTTGGGCAATAATAGGGACTGTCTTTGACTTTCTATCAGCAACCGGGCGAGGAACGAAGCAGAAAGACAGCGAAACAGGCCATTCATT                                                                                                                                                                           ]
[-] EMBL CD168744             [                                                                                                                                                                                                                                                                                                                                  GTATTTGCACGAGATAAATATTCACATGATCAATTGTCGTGAACCACACAAACTAGTTTACTGCCTTTTGCATGGTCTGTAGAACTTTCTGAGCGTGAGAAACAGCAGAATCAAACAAAACATTCCACGAGTTGACTACATCAC TTTCATTTGTACTCGCCACAAA TAAATTGTCCCACAAACCCGTTAAAAATGCATTGATCACAGAAAGATCGACGATAGCACCCTGAGAAACAGTTATGTGTACTGGGCCAGCATCCGTATCCCAAATATCTAACTCTCGTTTCGTTGGTTGGGCAATAATAGGGACTGTCTTTGACTTTCTATCAGCAACCGGGCGAGGAACGAAGCAGAAAGACAGCGAAACAGGCCATTCATTCACTTTTAAGGATATTGTCTCATTTAATGGTCCTGGTTTATATAATTCTAAGTAGGATCCCGCAGCTTGTTCATCCGTAACCGCATATAACTTTGTCCATTTTGTTGTACAAAGACTAACAAGTGCAGCGGGGACACAAGCATCTAGTAAGCACCCATCG           ]
[+] EMBL CD134343             [                                                                                                                                                                                                                                                                                                                                                                                                           GGTCTGTAGAACTTTCTGAGCGTGAGAAACAGCAGAATCAAACGGGAGATTCCACGAGTTGACTACATCACATTTCATTTGTACTCGCCACAAAGTAAATTGTCCCACAAACCCGTTAAAAATGCATTGATCACAGAAAGATCGACGATAGCACCCTGAGAAACAGTTAT                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD078197             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTTTAAGGATATTGTCTCATTTAATGGTCCTGGTTTATATAATTCTAAGTAGGATCCCGCAGCTTGTTCATCCGTAACCGCATATAACTTTGTCCATTTTGTTGTACAAAGACTAACAAGTGCAGCGGGGACACAAGCATCTAGTAAGCACCCATCGTCCTCGTGACG]


>consensus_9712#0 TTTTTTTTTTTTTTTTTAATATTCAATAAGTTTTATTTTCTTACAGTGAGGTTAACAAAT TAATTGTATATCATACAAAAAAGTAGTAAGGTTGAATTTTTTACAAAAGACAGTGTTATA TACAATGAAACACTTTTGACCGACATTCACTTAACACTTAACAGTTGGGTATTCCCGAAC CAGCCTGGAGAAAATATGTTAACCCATGCCGTTTTGAGAACATTAGTTGTTTCGACGAAG AATTTTAATCTCAATAAAATCAGTAACTTTCAATCTGTATGAAATAAAATATCACTGCAC AAAATAAAGTCCTCCTAAAGATGTATTTGCACGAGATAAATATTCACATGATCAATTGTC GTGAACCACACAAACTAGTTTACTGCCTTTTGCATGGTCTGTAGAACTTTCTGAGCGTGA GAAACAGCAGAATCAAACAAAACATTCCACGAGTTGACTACATCACTTTCATTTGTACTC GCCACAAATAAATTGTCCCACAAACCCGTTAAAAATGCATTGATCACAGAAAGATCGACG ATAGCACCCTGAGAAACAGTTATGTGTACTGGGCCAGCATCCGTATCCCAAATATCTAAC TCTCGTTTCGTTGGTTGGGCAATAATAGGGACTGTCTTTGACTTTCTATCAGCAACCGGG CGAGGAACGAAGCAGAAAGACAGCGAAACAGGCCATTCATTCACTTTTAAGGATATTGTC TCATTTAATGGTCCTGGTTTATATAATTCTAAGTAGGATCCCGCAGCTTGTTCATCCGTA ACCGCATATAACTTTGTCCATTTTGTTGTACAAAGACTAACAAGTGCAGCGGGGACACAA GCATCTAGTAAGCACCCATCGTCCTCGTGACG



consensusID : consensus_9712#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 571
fasta sequence
                              [TATGATTGCATTGCCTTTCTCAAAAATACATATGAATGCTTTGAAGACAGCTTGGGTCATTGGATGTGCATTTTCCCCTTCTATGAACTTTGTTGCTAGTGGTGGATTAGATAATGTCATATCTTATTTCGATTTAAAGTCTCAGGACGGCACCGCAGAGTTTGTCCGCGAGTTTACTGGTCATAATGGTTACATCGCATGTGTCCGATTCATTGATGATAATCGATTACTGAGTTGTTCTGGTGACAAAACTTGTGCACTGTGGGATATCGAAAAGTCTAAAATCACTACAAGTTTTCGTGGACACTCAAATGATGTTAACGCCATTGCCGTTTCGAAGCAGATGCCAAATTTGTTTGTTTCTGCATCTTCAGACCGCACTTGTCGGTTGGGGGATCTTCGGTGCGGCGAAGGTATGCAGTACTTCGAAGGACACCAGCAGGATGTTAATGGTGTGGACTTTTTCCCCGTCAATTCTTATGCTTTCGCCTCTTCTTCCGACGATGGCTCGTGTCATTTGTGGGATCTACGAGCTGATCAGGCAATTGGGGTCTATATTGATGACTTCATT]

[-] EMBL CD180661             [TATGATTGCATTGCCTTTCTCAAAAATACATATGAATGCTTTGAAGACAGCTTGGGTCATTGGATGTGCATTTTCCCCTTCTATGAACTTTGTTGCTAGTGGTGGATTAGATAATGTCATATCTTATTTCGATTTAAAGTCTCAGGACGGCACCGCAGAGTTTGTCCGCGAGTTTACTGGTCATAATGGTTACATCGCATGTGTCCGATTCATTGATGATAATCGATTAC                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD196706             [                       AAATTCATATGATTGCTTTGAAGACAGCTTGGGTCATTGGATGTGCATTTTCCCCTTCTATGAACTTTGTTGCTAGTGGTGGATTAGATAATGTCATATCTTATTTCAATTTAAAGTCTCAGGACGGCACCGCAGAGTTTGTCCGCGAGTTTACTGGTCATAATGGTTACATCGCATGTGTCCGATTCATTGATGATAATCGATTACTGAGTTGTTCTGGTGACAAAACTTGTGCACTGTGGGATATCGAAAAGTCTAAAATCACTACAAGTTTTCGTGGACACTCAAATGATGTTAACGCCATTGCCGTTTCGAAGCAGATGCCAAATTTGTTTGTTTCTGCATCTTCAGACCGCACTTGTCGGTTGGGGGATCT                                                                                                                                                                            ]
[+] EMBL CD135314             [                                                                                                                                                                                         ATGGTTACATCGCATGTGTCCGATTCATTGATGATAATCGATTACTGAGTTGTTCTGGTGACAAAACTTGTGCACTGTGGGATATCGAAAAGTCTAAAATCACTACAAGTTTTCGTGGACACTCTAATGATGTTAACGCCATTGCCGTTTCGAAGCAGATGCCAAATTTGTTTGTTTCTGCATCTTCAGACCGCACTTGTCGGTTGTGGGATCTTCGGTGCGGCGAAGGTATGCAGTACTTCGAAGGACACCAGCAGGATGTTAATGGTGTGGACTTTTTCCCCGTCAATTCTTATGCTTTCGCCTCTTCTTCCGACGATGGCTCGTGTCATTTGTGGGATCTACGAGCTGATCAGGCAATTGGGGTCTATATTGATGACTTCATT]


>consensus_9712#1 TATGATTGCATTGCCTTTCTCAAAAATACATATGAATGCTTTGAAGACAGCTTGGGTCAT TGGATGTGCATTTTCCCCTTCTATGAACTTTGTTGCTAGTGGTGGATTAGATAATGTCAT ATCTTATTTCGATTTAAAGTCTCAGGACGGCACCGCAGAGTTTGTCCGCGAGTTTACTGG TCATAATGGTTACATCGCATGTGTCCGATTCATTGATGATAATCGATTACTGAGTTGTTC TGGTGACAAAACTTGTGCACTGTGGGATATCGAAAAGTCTAAAATCACTACAAGTTTTCG TGGACACTCAAATGATGTTAACGCCATTGCCGTTTCGAAGCAGATGCCAAATTTGTTTGT TTCTGCATCTTCAGACCGCACTTGTCGGTTGGGGGATCTTCGGTGCGGCGAAGGTATGCA GTACTTCGAAGGACACCAGCAGGATGTTAATGGTGTGGACTTTTTCCCCGTCAATTCTTA TGCTTTCGCCTCTTCTTCCGACGATGGCTCGTGTCATTTGTGGGATCTACGAGCTGATCA GGCAATTGGGGTCTATATTGATGACTTCATT



consensusID : consensus_9712#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 486
fasta sequence
                              [AGCAGAATCAAACAAAACATTCCACGCGTTGACTACATCACTTTCATTTGTACTCGCTACAAATAAATTGTCCCACAAACCCGTTAAAAATGCATTGATCACAGAAAGATCGACGATAGCACCCTGAGAAACAGTTATGTGTACTGGGCCAGCATCCGTATCCCAAATATCTAACTCTCGTTTCGTTGGTTGGGCAATAATAGGGACTGTCTTTGACTTTCTATCAGCAACCGGGCGAGGAACGAAGCAGAAAGACAATTGGAATCCCATGACCCAGTTGCAACACCTATGCCACTATCAGATACTGTTACACAAGAGACCCGGTTTTCGTGGGCGGACATGATTCCAACACGTTCTTCTCGTAGCAGATCCCAGACGTGACAGTTGAAGTCATCGTATCCAGCAAGTAACAGACGACCCGACTTTGAAATTGCCACACTACTACTACCACAGTTAATGAAGTCATCAATATAGGCACCAATTGCC]

[-] EMBL CD094906             [AGCAGAATCAAACAAAACATTCCACGCGTTGACTACATCACTTTCATTTGTACTCGCTACAAATAAATTGTCCCACAAACCCGTTAAAAATGCATTGATCACAGAAAGATCGACGATAGCACCCTGAGAAACAGTTATGTGTACTGGGCCAGCATCCGTATCCCAAATATCTAACTCTCGTTTCGTTGGTTGGGCAATAATAGGGACTGTCTTTGACTTTCTATCAGCAACCGGGCGAGGAACGAAGCAGAAAGACAATTGGAATCCCATGACCCAGTTGCAACACCTATGCCACTATCAGATACTGTTACACAAGAGACCCGGTTTTCGTGGGCGGACATGATTCCAACACGTTCTTCTCGTAGCAGATCCCAGACGTGACAGTTGAAGTCATCGTATCCAGCAAGTAACAGACGACCCGACTTTGAAATTGCCACACTACTACTACCACAGTTAATGAAGTCATCAATATAGGCACCAATTGCC]


>consensus_9712#2 AGCAGAATCAAACAAAACATTCCACGCGTTGACTACATCACTTTCATTTGTACTCGCTAC AAATAAATTGTCCCACAAACCCGTTAAAAATGCATTGATCACAGAAAGATCGACGATAGC ACCCTGAGAAACAGTTATGTGTACTGGGCCAGCATCCGTATCCCAAATATCTAACTCTCG TTTCGTTGGTTGGGCAATAATAGGGACTGTCTTTGACTTTCTATCAGCAACCGGGCGAGG AACGAAGCAGAAAGACAATTGGAATCCCATGACCCAGTTGCAACACCTATGCCACTATCA GATACTGTTACACAAGAGACCCGGTTTTCGTGGGCGGACATGATTCCAACACGTTCTTCT CGTAGCAGATCCCAGACGTGACAGTTGAAGTCATCGTATCCAGCAAGTAACAGACGACCC GACTTTGAAATTGCCACACTACTACTACCACAGTTAATGAAGTCATCAATATAGGCACCA ATTGCC



consensusID : consensus_9712#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 384
fasta sequence
                              [ATGAAGAAATATCGGAAGAGGAAAAGGCTTTGGATGCAGAAATACTGAATCTTAAAACTTCAATTACTGATGCACAGAAAGCTGTTGCAGATACAGACTTTTACAAAATGACTGCGAACGTACCTGAACTTGGTAGAATTAAGTTCAAAGTACGTAAACATTTACGAGGTCATCTAGCTAAAGTGACGTCTATCCAATGGGCTTCTGACAACCAGTTACTATTGTCCGCTTCTCAAGATGGAAAATTAATCGTTTGGGATACATTTTCTGGAAAGAAAATTCATATGATTGCTTTGAAGACAGCTTGGGTCATTGGATGTGCATTTTCCCCTTCTATGAACTTTGTTGCTAGGGGTGGATTAAATAATGTCATATCTTATTTCA]

[+] EMBL CD188789             [ATGAAGAAATATCGGAAGAGGAAAAGGCTTTGGATGCAGAAATACTGAATCTTAAAACTTCAATTACTGATGCACAGAAAGCTGTTGCAGATACAGACTTTTACAAAATGACTGCGAACGTACCTGAACTTGGTAGAATTAAGTTCAAAGTACGTAAACATTTACGAGGTCATCTAGCTAAAGTGACGTCTATCCAATGGGCTTCTGACAACCAGTTACTATTGTCCGCTTCTCAAGATGGAAAATTAATCGTTTGGGATACATTTTCTGGAAAGAAAATTCATATGATTGCTTTGAAGACAGCTTGGGTCATTGGATGTGCATTTTCCCCTTCTATGAACTTTGTTGCTAGGGGTGGATTAAATAATGTCATATCTTATTTCA]


>consensus_9712#3 ATGAAGAAATATCGGAAGAGGAAAAGGCTTTGGATGCAGAAATACTGAATCTTAAAACTT CAATTACTGATGCACAGAAAGCTGTTGCAGATACAGACTTTTACAAAATGACTGCGAACG TACCTGAACTTGGTAGAATTAAGTTCAAAGTACGTAAACATTTACGAGGTCATCTAGCTA AAGTGACGTCTATCCAATGGGCTTCTGACAACCAGTTACTATTGTCCGCTTCTCAAGATG GAAAATTAATCGTTTGGGATACATTTTCTGGAAAGAAAATTCATATGATTGCTTTGAAGA CAGCTTGGGTCATTGGATGTGCATTTTCCCCTTCTATGAACTTTGTTGCTAGGGGTGGAT TAAATAATGTCATATCTTATTTCA



consensusID : consensus_9712#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 366
fasta sequence
                              [GTTAAAATGGTCAGATTCTACATCACGTAAAGTTTAATTTAAGAGATCATTAGAAATAAAAAGAAACGATTCCAAAAGTATCAAAAATTTGAGTAATCACTTCAAGAATTTAGTTGATACATACCTATTTCGCAGTCCATATGAGACAATTGGAATCCCATGACCCAGTTGCAACACCTATGCCACTATCAGATACTGTTACACAAGAGACCCGGTTTTCGTGGGCGGACATGATTCCAACACGTTCTTCTCGTAGCAGATCCCAGACGTGACAGTTGAAGTCATCGTATCCAGCAAGTAACAGACGACCCGACTTTGAAATTGCCACACTACTACTACCACAGTTAATGAAGTCATCAATATAGA]

[+] EMBL CD131167             [GTTAAAATGGTCAGATTCTACATCACGTAAAGTTTAATTTAAGAGATCATTAGAAATAAAAAGAAACGATTCCAAAAGTATCAAAAATTTGAGTAATCACTTCAAGAATTTAGTTGATACATACCTATTTCGCAGTCCATATGAGACAATTGGAATCCCATGACCCAGTTGCAACACCTATGCCACTATCAGATACTGTTACACAAGAGACCCGGTTTTCGTGGGCGGACATGATTCCAACACGTTCTTCTCGTAGCAGATCCCAGACGTGACAGTTGAAGTCATCGTATCCAGCAAGTAACAGACGACCCGACTTTGAAATTGCCACACTACTACTACCACAGTTAATGAAGTCATCAATATAGA]


>consensus_9712#4 GTTAAAATGGTCAGATTCTACATCACGTAAAGTTTAATTTAAGAGATCATTAGAAATAAA AAGAAACGATTCCAAAAGTATCAAAAATTTGAGTAATCACTTCAAGAATTTAGTTGATAC ATACCTATTTCGCAGTCCATATGAGACAATTGGAATCCCATGACCCAGTTGCAACACCTA TGCCACTATCAGATACTGTTACACAAGAGACCCGGTTTTCGTGGGCGGACATGATTCCAA CACGTTCTTCTCGTAGCAGATCCCAGACGTGACAGTTGAAGTCATCGTATCCAGCAAGTA ACAGACGACCCGACTTTGAAATTGCCACACTACTACTACCACAGTTAATGAAGTCATCAA TATAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9712#2      ------------------------------------------------------------
consensus_9712#4      ------------------------------------------------------------
consensus_9712#0      TTTTTTTTTTTTTTTTTAATATTCAATAAGTTTTATTTTCTTACAGTGAGGTTAACAAAT 60
consensus_9712#1      ------------------------------------------------------------
consensus_9712#3      ------------------------------------------------------------
                                                                                  

consensus_9712#2      ------------------------------------------------------------
consensus_9712#4      ------------------------------------------------------------
consensus_9712#0      TAATTGTATATCATACAAAAAAGTAGTAAGGTTGAATTTTTTACAAAAGACAGTGTTATA 120
consensus_9712#1      ------------------------------------------------------------
consensus_9712#3      ------------------------------------------------------------
                                                                                  

consensus_9712#2      ------------------------------------------------------------
consensus_9712#4      ------------------------------------------------------------
consensus_9712#0      TACAATGAAACACTTTTGACCGACATTCACTTAACACTTAACAGTTGGGTATTCCCGAAC 180
consensus_9712#1      ------------------------------------------------------------
consensus_9712#3      ------------------------------------------------------------
                                                                                  

consensus_9712#2      ------------------------------------------------------------
consensus_9712#4      ------------------------------------------------------------
consensus_9712#0      CAGCCTGGAGAAAATATGTTAACCCATGCCGTTTTGAGAACATTAGTTGTTTCGACGAAG 240
consensus_9712#1      ------------------------------------------------------------
consensus_9712#3      ------------------------------------------------------------
                                                                                  

consensus_9712#2      ------------------------------------------------------------
consensus_9712#4      ------------------------------------------------------------
consensus_9712#0      AATTTTAATCTCAATAAAATCAGTAACTTTCAATCTGTATGAAATAAAATATCACTGCAC 300
consensus_9712#1      ------------------------------------------------------------
consensus_9712#3      ------------------------------------------------------------
                                                                                  

consensus_9712#2      ------------------------------------------------------------
consensus_9712#4      ------------------------------------------------------------
consensus_9712#0      AAAATAAAGTCCTCCTAAAGATGTATTTGCACGAGATAAATATTCACATGATCAATTGTC 360
consensus_9712#1      --------------------------------------TATGATTGCATTGCCTTTCTCA 22
consensus_9712#3      ------------------------------------------------------------
                                                                                  

consensus_9712#2      ------------------------------------------------------------
consensus_9712#4      ------------------------------------------------------------
consensus_9712#0      GTGAACCACACAAACTAGTTTACTGCCTTTTGCATGGTCTGTAGAACTTTCTGAGCGTGA 420
consensus_9712#1      AAAATACATATGAATGCTTTGAAGACAGCTTGGGTCATTGGATGTGCATTTTCCCCTTCT 82
consensus_9712#3      ------------------------------------------------------------
                                                                                  

consensus_9712#2      -----AGCAGAATCAAACAAAACATTCCACGCGTTGACTACATCACTTTCATTTGTACTC 55
consensus_9712#4      ------------------------------------------------------------
consensus_9712#0      GAAACAGCAGAATCAAACAAAACATTCCACGAGTTGACTACATCACTTTCATTTGTACTC 480
consensus_9712#1      ATGAACTTTGTTGCTAGTGGTGGATTAGATAATGTCA-TATCTTATTTCGATTTAAAGTC 141
consensus_9712#3      --------------------------------------------------ATGAAGAAAT 10
                                                                                  

consensus_9712#2      GCTACAAATAAATTGTCCCACAAACCCGTTAAAAATGCATTGA-TCACAGAAAGATCGAC 114
consensus_9712#4      ---------------------------GTTAAAA-TGGTCAGA-TTCTACATCACGTAAA 31
consensus_9712#0      GCCACAAATAAATTGTCCCACAAACCCGTTAAAAATGCATTGA-TCACAGAAAGATCGAC 539
consensus_9712#1      TC----AGGACGGCACCGCAGAGTTTGTCCGCGAGTTTACTGG-TCATAATGGTTACATC 196
consensus_9712#3      AT-----CGGAAGAGGAAAAGGCTTTGGATGCAGAAATACTGAATCTTAAAACTTCAATT 65
                                                               *  *   *           

consensus_9712#2      GATAGCACCCTGAGAAACAGTT-ATGTGTACTGGGCCAGCATCCGTATCCCAAATATCTA 173
consensus_9712#4      GTT--TAATTTAAGAGATCATT-AGAAATAAAAAGAAACGATTCCAA----AAGTATCAA 84
consensus_9712#0      GATAGCACCCTGAGAAACAGTT-ATGTGTACTGGGCCAGCATCCGTATCCCAAATATCTA 598
consensus_9712#1      GCATGTGTCC---GATTCATTG-ATG-ATAATCGATTACTGAGT-TGTTCTGGTGACAAA 250
consensus_9712#3      ACTGATGCACAGAAAGCTGTTGCAGATACAGACTTTTACAAAATGACT----GCGAACGT 121
                                    *     *  *     *       *                 *    

consensus_9712#2      ACTCTCGTTTCGTTGGTTGGGCAATAATAGGGACTGTCTTTGACTTTCTATCAGCAACCG 233
consensus_9712#4      AAATTTGAGTAATCACTT---CAAGAATTTAGTTGATACATACCTATTTCGCAGT--CCA 139
consensus_9712#0      ACTCTCGTTTCGTTGGTTGGGCAATAATAGGGACTGTCTTTGACTTTCTATCAGCAACCG 658
consensus_9712#1      ACTTGTGCACTGTGGGATATCGAAAAGTCTAAAATCACTACAAGTTTTCGTGGACACTCA 310
consensus_9712#3      ACCTGAACTTGGTAGAAT-----TAAGTTCAAAGTACGTAAACATTTACGAGGTCATCTA 176
                      *           *    *       * *                * *             

consensus_9712#2      GGCGAGGAACGAAGCAGAAAGACAATTGGAATCCCATGACCCAGTTGCA-ACACCTATGC 292
consensus_9712#4      TATGAG---------------ACAATTGGAATCCCATGACCCAGTTGCA-ACACCTATGC 183
consensus_9712#0      GGCGAGGAAC-----------GAAGCAGAAAGACAGCGAAACAG--GCC-ATTCATTCAC 704
consensus_9712#1      AATGATG--TTAACGCCATTGCCGTTTCGAAGCAGATGCCAAATTTGTTTGTTTCTGCAT 368
consensus_9712#3      GCTAAAG---TGACGTC-TATCCAATGGGCTTCTGACAACCAGTT-ACTATTGTCCGCTT 231
                          *                                                       

consensus_9712#2      CACTATCAGATA--CTGTTACAC--AAGAGACCCGGTTTTCGTGGGCGG--ACATGATTC 346
consensus_9712#4      CACTATCAGATA--CTGTTACAC--AAGAGACCCGGTTTTCGTGGGCGG--ACATGATTC 237
consensus_9712#0      TTTTAA-GGATA--TTGTCTCATTTAATGGTCCTGGTTTATATAATTCT--AAGTAGGAT 759
consensus_9712#1      CTTCAGACCGCA--CTTGTCGGTTGGGGGATCTTCGGTGCGGCGAAGGT--ATGCAGTAC 424
consensus_9712#3      CTCAAGATGGAAAATTAATCGTTTGGGATACATTTTCTGGAAAGAAAATTCATATGATTG 291
                          *      *   *                     *             *        

consensus_9712#2      CAACACGTTCTTCTCGTAGCAGATCCCAGACGTGACAGTTGAAGTCATCGTATCCAGCAA 406
consensus_9712#4      CAACACGTTCTTCTCGTAGCAGATCCCAGACGTGACAGTTGAAGTCATCGTATCCAGCAA 297
consensus_9712#0      CC-CGCAGCTTGTTCATCCGTAACCGCATATAACTTTGTCCATTTTGTTGTA--CAAAGA 816
consensus_9712#1      TT-CGAAGGACACCAGCAGGATGTTAATGGTGTGGACTTTTTCCCCGTCAATTCTTATGC 483
consensus_9712#3      CTTTGAAGACAGCT--TGGGTCATTGGATGTGCATTTTCCCCTTCTATGAACTTTGTTGC 349
                                                                     *            

consensus_9712#2      GT--AACAGACGACCCGACTTTG-AAATTGCCACACTACTACTACCACAGTTAATGAAGT 463
consensus_9712#4      GT--AACAGACGACCCGACTTTG-AAATTGCCACACTACTACTACCACAGTTAATGAAGT 354
consensus_9712#0      CT--AACAAGTGCAGCGGGGACA-CAAGCATCTAGTAAGCACCCATCGTCCTCGTGACG- 872
consensus_9712#1      TTTCGCCTCTTCTTCCGACGATGGCTCGTGTCATTTGTGGGATCTACGAGCTGATCAGGC 543
consensus_9712#3      TA---GGGGTGGATTAAATAATGTCATATCTTATTTCA---------------------- 384
                                                                                  

consensus_9712#2      CATCAATATAGGCACCAATTGCC----- 486
consensus_9712#4      CATCAATATAGA---------------- 366
consensus_9712#0      ----------------------------
consensus_9712#1      AATTGGGGTCTATATTGATGACTTCATT 571
consensus_9712#3      ----------------------------
                                                  




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)