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Schistosoma mansoni
cluster # 9713 cluster # 9713       Sequences # 11       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9713#0 length = 886 sequences # 3  
consensus_9713#1 length = 882 sequences # 3  
consensus_9713#2 length = 673 sequences # 2  
consensus_9713#3 length = 393 sequences # 1  
consensus_9713#4 length = 269 sequences # 2  

consensusID : consensus_9713#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 886
fasta sequence
                              [CTTATTTTACAAATTAGCTACAACTTTTAAGATCTCATTTATAAAATTGAACTGTTGTATTCTATCATCATGTATGTTACAAGTCGTCTCTTTGTAATCTTGGCCCAACTTGTCGATCTTTATCGGTTAACGGAACATAAATCACACCCATTAAAGATTTTCTTTGAAAGGAACCATCTTGCAAACGATCAATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACCAATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAGTTGTTTTCCTAATTCAATTCCAGATAGTCGAGCATTTTGGCTATGATTAAACCAATTTTCAACATTTGACAGAGAAAATTTAGTCAACTCATCAATATGTTCTATGCCTACAGCAACACCTGTAGGGCCTACCATAAGAGCCATACACGCCGTTAAATATCCACTACCCGATCCAACATCTAAAACATGTGCACCAGGTTTAAGATGATCTTTTAATGCTTCCAGAGCATAAGCATGCATATGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATGGTCGGTCTTCGTAAGAATTCGACTTAGCAAAATATCCACGATCCACGGAAAGCATAGTATTCCTGACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGCATGTGTGCTACCGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAGTAGAAAAGTTACAATGATTGGTGTGTATAATTAAACAACCATCAGCCTCGTGCCGAATTTTGGCCCGAG]

[+] EMBL CD074209             [CTTATTTTACAAATTAGCTACAACTTTTAAGATCTCATTTATAAAATTGAACTGTTGTATTCTATCATCATGTATGTTACAAGTCGTCTCTTTGTAATCTTGGCCCAACTTGTCGATCTTTATCGGTTAACGGAACATAAATCACACCCATTAAAGATTTTCTTTGAAAGGAACCATCTTGCAAACGATCAATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACCAATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAGTTGTTTTCCTAATTCAATTCCAGATAGTCGAGCATTTTGGCTATGATTAAACCAATTTTCAACATTTGACAGAGAAAATTTAGTCAACTCATCAATATGTTCTATGCCTACAGCAACACCTGTAGGGCCTACCATAAGAGCCATACACGCCGTTAAATATCCACTACCCGATCCAACATCTAAAACATGTGCACCAGGTTTAAGATGATCTTTTAATGCTTCCAGAGCATAAGCATGCATATGAGGAGCACTGATAGTCGCGGCATAGCCAA                                                                                                                                                                                                                                                    ]
[-] EMBL CD080290             [                                                                                                                                                                                                                                                                           TTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAGTTGTTTTCCTAATTCAATTCCAGATAGTCGAGCATTTTGGCTATGATTAAACCAATTTTCAACATTTGACAGAGAAAATTTAGTCAACTCATCAATATGTTCTATGCCTACAGCAACACCTGTAGGGCCTACCATAAGAGCCATACACGCCGTTAAATATCCACTACCCGATCCAACATCTAAAACATGTGCACCAGGTTTAAGATGATCTTTTAATGCTTCCAGAGCATAAGCATGCATATGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATGGTCGGTCTTCGTAAGAATTCGACTTAGCAAAATATCCACGATCCACGGAAAGCATAGTATTCCTGACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGCATGTGTGCTACCGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAGTAGAAAAGTTACAATGATTGGTGTGTATAATTAAACAACCATCAGCCTCGTGCCGAATTTTGGCCCGAG]
[+] EMBL CD166760             [                                                                                                                                                                                                                                                                                                                                                               CACCAGTAACAAGTTTAAGTTGTTTTCCTAATTCAATTCCAGATAGTCGAGCATTTTGGCTATGATTAAACCAATTTTCAACATTTGACAGAGAAAATTTAGTCAACTCATCAATATGTTCTATGCCTACAGCAACACCTGTAGGGCCTACCATAAGAGCCATACACGCCGTTAAATATCCACTACCCGATCCAACATCTAAAACATGTGCACCAGGTTTAAGATGATCTTTTAATGCTTCCAGAGCATAAGCATGCATATGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATGGTCGGTCTTCGTAAGAATTCGACTTAGCAAAATATCCACGATCCACGGAAAGCATAGTATTCCTGACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTAT                                                                                                                              ]


>consensus_9713#0 CTTATTTTACAAATTAGCTACAACTTTTAAGATCTCATTTATAAAATTGAACTGTTGTAT TCTATCATCATGTATGTTACAAGTCGTCTCTTTGTAATCTTGGCCCAACTTGTCGATCTT TATCGGTTAACGGAACATAAATCACACCCATTAAAGATTTTCTTTGAAAGGAACCATCTT GCAAACGATCAATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTA AACGACCACCAATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCAC CTACGTGAATTGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAA CAAGTTTAAGTTGTTTTCCTAATTCAATTCCAGATAGTCGAGCATTTTGGCTATGATTAA ACCAATTTTCAACATTTGACAGAGAAAATTTAGTCAACTCATCAATATGTTCTATGCCTA CAGCAACACCTGTAGGGCCTACCATAAGAGCCATACACGCCGTTAAATATCCACTACCCG ATCCAACATCTAAAACATGTGCACCAGGTTTAAGATGATCTTTTAATGCTTCCAGAGCAT AAGCATGCATATGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATGGTCGGTCTT CGTAAGAATTCGACTTAGCAAAATATCCACGATCCACGGAAAGCATAGTATTCCTGACAA TTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGCATGTGTGCTAC CGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAGTAGAAAAGTTACAATGATTGGTG TGTATAATTAAACAACCATCAGCCTCGTGCCGAATTTTGGCCCGAG



consensusID : consensus_9713#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 882
fasta sequence
                              [AAAACAATTTCATTTTGCTGTAAACAATGGTTCTACATATAAGTGGTTGGCAAAAAACTGGACCAAGGTTTCATGTTAGTTGGCATTTGTTACCAAGGCATAAATGCAATCAAAAAGGAACTGATGGTCTCCGTAGGATTCCATGTCACCCGGCTTCAATATCTAAAACGGTATTACTGAACCGTTAAAGTACCAACTGACTTCCAGTATGATTAAAATACTTACAATTGATATATATGGGCATCTTTCAAAAAAATCCAAGTCTTACCTTGGCCCAACTTGTCAATCTTTATCGGTTAACGGAACATAAATCACACCCATTAAAGATTTTCTTTGAAAGGAACCATCTTGCAAACGATCAATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACCAATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAGTTGTTTTCCTAATTCAATTCCAGATAGTCGAGCATTTTGGCTATGATTAAACCAATTTTCAACATTTGACAGAGAAAATTTAGTCAACTCATCAATATGTTCTATGCCTACAGCAACACCTGTAGGGCCTACCATATGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATGGTCGGTCTTCGTAAGAATTCGACTTAGCAAAATATCCACGATCCACGGAAAGCATAGTATTCCTGACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGCATGTGTGCTACCGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAG]

[+] EMBL CD073319             [AAAACAATTTCATTTTGCTGTAAACAATGGTTCTACATATAAGTGGTTGGCAAAAAACTGGACCAAGGTTTCATGTTAGTTGGCATTTGTTACCAAGGCATAAATGCAATCAAAAAGGAACTGATGGTCTCCGTAGGATTCCATGTCACCCGGCTTCAATATCTAAAACGGTATTACTGAACCGTTAAAGTACCAACTGACTTCCAGTATGATTAAAATACTTACAATTGATATATATGGGCATCTTTCAAAAAAATCCAAGTCTTACCTTGGCCCAACTTGTCAATCTTTATCGGTTAACGGAACATAAATCACACCCATTAAAAATTTTCTTTGAAAGGAACCATCTTGCAAACAATCAATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACCAATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGACCCGCTGCACCTACGTGAATT                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD197922             [                                                                                                             cgagagAGGAACTGATGGTCTCCGTAGGGTTCCATGTCACCCGGCTTCACAATCTAAGACGGTATTACTGAACCGTTAGAGTAGCAACTGACTTCCAGTATGATTAAAATACTTACAATTGATATATATGGGCATCTTTCAAAGAAATCAAAGTCTTACCTTGGCCCAACTTGTCGATCTTTATCGGTTAACGGAACATAAATCACACCCATTAAAGATTTTCTTTGAAAGGAACCATCTTGCAAACGATCAATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACCAATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAGTTGTT                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD078859             [                                                                                                                                                                                                                                                                                                                      ATCACACCCATTAAAGA TTTCTTTGAAAGGAACCATCTTGCAAACGATCAATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACCAATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAGTTGTTTTCCTAATTCAATTCCAGATAGTCGAGCATTTTGGCTATGATTAAACCAATTTTCAACATTTGACAGAGAAAATTTAGTCAACTCATCAATATGTTCTATGCCTACAGCAACACCTGTAGGGCCTACCATATGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATGGTCGGTCTTCGTAAGAATTCGACTTAGCAAAATATCCACGATCCACGGAAAGCATAGTATTCCTGACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGCATGTGTGCTACCGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAG]


>consensus_9713#1 AAAACAATTTCATTTTGCTGTAAACAATGGTTCTACATATAAGTGGTTGGCAAAAAACTG GACCAAGGTTTCATGTTAGTTGGCATTTGTTACCAAGGCATAAATGCAATCAAAAAGGAA CTGATGGTCTCCGTAGGATTCCATGTCACCCGGCTTCAATATCTAAAACGGTATTACTGA ACCGTTAAAGTACCAACTGACTTCCAGTATGATTAAAATACTTACAATTGATATATATGG GCATCTTTCAAAAAAATCCAAGTCTTACCTTGGCCCAACTTGTCAATCTTTATCGGTTAA CGGAACATAAATCACACCCATTAAAGATTTTCTTTGAAAGGAACCATCTTGCAAACGATC AATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACC AATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAAT TGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAG TTGTTTTCCTAATTCAATTCCAGATAGTCGAGCATTTTGGCTATGATTAAACCAATTTTC AACATTTGACAGAGAAAATTTAGTCAACTCATCAATATGTTCTATGCCTACAGCAACACC TGTAGGGCCTACCATATGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATGGTCG GTCTTCGTAAGAATTCGACTTAGCAAAATATCCACGATCCACGGAAAGCATAGTATTCCT GACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGCATGTGT GCTACCGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAG



consensusID : consensus_9713#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 673
fasta sequence
                              [CATGGATGAAAGCATATGAATTTAAATGCAGACCAAAATCATGATGAGGTATAAGTCGTAAAAAAGCACACTAAATAAGAACGACTTGATAGTTTAATTTCTCCCACCCCACCCCGGAAAAAGTAAAATGGGTTTCCACATTTTAACAGAGGAGAAAATAGTGTTCAGTATGAAAGCTGACAATTACTCGTTAGTGCTCTGTATTAATGAAATCACATTCATGTAACATAAGAACACAGTTAATAGTTTATGGTAAGAAATATGCATGGGTGATGATTTTGTTGGTGAAGTGATAATGATTGGTTGATCTCTGTGAGCAGAAAAACAAAACAAATTAATAACAGTAGTTAAGAAAAATGGTGATTTAATGCCACTTCCTTGGCCCAACTTGTCGATCTTTATCGGTTAACGGAACATAAATCACACCCATTAAAGATTTTTTTTGAAAGGAACCTCCTTGCAAACGATCAATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACCAATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAGTTGTTTTCCTAATTCAATTCCAGC]

[-] EMBL CD167743             [CATGGATGAAAGCATATGAATTTAAATGCAGACCAAAATCATGATGAGGTATAAGTCGTAAAAAAGCACACTAAATAAGAACGACTTGATAGTTTAATTTCTCCCACCCCACCCCGGAAAAAGTAAAATGGGTTTCCACATTTTAACAGAGGAGAAAATAGTGTTCAGTATGAAAGCTGACAATTACTCGTTAGTGCTCTGTATTAATGAAATCACATTCATGTAACATAAGAACACAGTTAATAGTTTATGGTAAGAAATATGCATGGGTGATGATTTTGTTGGTGAAGTGATAATGATTGGTTGATCTCTGTGAGCAGAAAAACAAAACAAATTAATAACAGTAGTTAAGAAAAATGGTGATTTAATGCCACTTCCTTGGCCCAACTTGTCGATCTTTATCGGTTAACGGAACATAAATCACACCCATTAAAGATTTTTTTTGAAAGGAACCTC                                                                                                                                                                                                                         ]
[-] EMBL CD077357             [                                                                                                                                                                                              TTAGTGCTCTGTATTAATGAAATCACATTCATGTAACATAAGAACACAGTTAATAGTTTATGGTAAGAAATATGCATGGGTGATGATTTTGTTGGTGAAGTGATAATGATTGGTTGATCTCTGTGAGCAGAAAAACAAAACAAATTAATAACAGTAGTTAAGAAAAATGGTGATTTAATGCCACTTCCTTGGCCCAACTTATCGATCTTTATCGGTTAACGGAACATAAATCACACCCATTAAAGATTTTCTTTGAAAGGAACCATCTTGCAAACGATCAATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACCAATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAGTTGTTTTCCTAATTCAATTCCAGC]


>consensus_9713#2 CATGGATGAAAGCATATGAATTTAAATGCAGACCAAAATCATGATGAGGTATAAGTCGTA AAAAAGCACACTAAATAAGAACGACTTGATAGTTTAATTTCTCCCACCCCACCCCGGAAA AAGTAAAATGGGTTTCCACATTTTAACAGAGGAGAAAATAGTGTTCAGTATGAAAGCTGA CAATTACTCGTTAGTGCTCTGTATTAATGAAATCACATTCATGTAACATAAGAACACAGT TAATAGTTTATGGTAAGAAATATGCATGGGTGATGATTTTGTTGGTGAAGTGATAATGAT TGGTTGATCTCTGTGAGCAGAAAAACAAAACAAATTAATAACAGTAGTTAAGAAAAATGG TGATTTAATGCCACTTCCTTGGCCCAACTTGTCGATCTTTATCGGTTAACGGAACATAAA TCACACCCATTAAAGATTTTTTTTGAAAGGAACCTCCTTGCAAACGATCAATTTGAACTA ACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACCAATTTTCAATT GTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATCATAAG GTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAGTTGTTTTCCTA ATTCAATTCCAGC



consensusID : consensus_9713#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 393
fasta sequence
                              [CAGCACACCTGTAGGGCTACCATAAGAGCCATACACGCCGTTAAATATCCACTACCCGATCCAACATCTAAAACATGTGCACCAGGTTTAAGATGATCTTTTAATGCTTCCAGAGCATAAGCATGCATATGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATGGTCGGTCTTCGTAAGAATTCGACTTAGCAAAATATCCACGATCCACGGAAAGCATAGTATTCCTGACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGCATGTGTGCTACCGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAGTAGAAAAGTTACAATGATTGGTGTGTATAATTAAACAACCATCAGCAGGAATTTGTTT]

[-] EMBL CD143192             [CAGCACACCTGTAGGGCTACCATAAGAGCCATACACGCCGTTAAATATCCACTACCCGATCCAACATCTAAAACATGTGCACCAGGTTTAAGATGATCTTTTAATGCTTCCAGAGCATAAGCATGCATATGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATGGTCGGTCTTCGTAAGAATTCGACTTAGCAAAATATCCACGATCCACGGAAAGCATAGTATTCCTGACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGCATGTGTGCTACCGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAGTAGAAAAGTTACAATGATTGGTGTGTATAATTAAACAACCATCAGCAGGAATTTGTTT]


>consensus_9713#3 CAGCACACCTGTAGGGCTACCATAAGAGCCATACACGCCGTTAAATATCCACTACCCGAT CCAACATCTAAAACATGTGCACCAGGTTTAAGATGATCTTTTAATGCTTCCAGAGCATAA GCATGCATATGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATGGTCGGTCTTCG TAAGAATTCGACTTAGCAAAATATCCACGATCCACGGAAAGCATAGTATTCCTGACAATT TCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGCATGTGTGCTACCG CTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAGTAGAAAAGTTACAATGATTGGTGTG TATAATTAAACAACCATCAGCAGGAATTTGTTT



consensusID : consensus_9713#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 269
fasta sequence
                              [TCGCCCTGCCCTGTCCCGTCGTGTCGCCCT---CT-TTAAAATGTCACTTGACCTTAAAGATGGACAAAGAGTAAGGCCCGTTATTTTGTAATTCGCTCCCACTGCGACTTTACCTTAGCAACATAATGCACACCCATTGAGATTTTTCTTTAGAAGGAACCATCTTGCAACGATCAATTTGAACAAACGCTTGATTTCCACCTTCTGGTCCTTCAGGAACAAATTAAATCACAACAATTCTCAATTGTTCTTTTAGTGATTAGAATAAGATT]

[-] EMBL AF042318             [TCGCCCTGCCCTGTCCCGTCGTGTCGCCCT   CT TTAAAATGTCACTTGACCTTAAAGATGGACAAAGAGTAAGGCCCGTTATTTTGTAATTCGCTCCCACTGCGACTTTACCTTAGCAACATAATGCACACCCATTGAGATTTTTCTTTAGAAGGAACCATCTTGCAACGATCAATTTGAACAAACGCTTGATTTCCACCTTCTGGTCCTTCAGGAACAAATTAAATCACAACAATTCTCAATTGTTCTTTTAGTGATTAGAATAAGATT]
[-] EMBL AA774379             [TCGCCCTGCCCTGTCCCGTCGTGTCGCCCTNNNCTNTTAAAATGTCACTTGACCTTAAAGATGGACAAAGAGTAAGGCCCGTTATTTTGTAATTCGCTCCCACTGCGACTTTACCTTAGCAACATAATGCACACCCATTGAGATTTTTCTTTAGAAGGAACCATCTTGCAACGATCAATTTGAACAAACGCTTGATTTCCACCTTCTGGTCCTTCAGGAACAAATTAAATCACAACAATTCTCAATTGTTCTTTTAGTGATT           ]


>consensus_9713#4 TCGCCCTGCCCTGTCCCGTCGTGTCGCCCTCTTTAAAATGTCACTTGACCTTAAAGATGG ACAAAGAGTAAGGCCCGTTATTTTGTAATTCGCTCCCACTGCGACTTTACCTTAGCAACA TAATGCACACCCATTGAGATTTTTCTTTAGAAGGAACCATCTTGCAACGATCAATTTGAA CAAACGCTTGATTTCCACCTTCTGGTCCTTCAGGAACAAATTAAATCACAACAATTCTCA ATTGTTCTTTTAGTGATTAGAATAAGATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9713#2      ------------------------------------------------------------
consensus_9713#4      ------------------------------------------------------------
consensus_9713#0      --------------------------------------------CTTATTTTACAAATTA 16
consensus_9713#3      ------------------------------------------------------------
consensus_9713#1      AAAACAATTTCATTTTGCTGTAAACAATGGTTCTACATATAAGTGGTTGGCAAAAAACTG 60
                                                                                  

consensus_9713#2      ------------------------------------------------------------
consensus_9713#4      ------------------------------------------------------------
consensus_9713#0      GCTACAACTTTTAAGATCTCATTTATAAAATTGAACTGTTGTATTCTATCATCATGTATG 76
consensus_9713#3      ------------------------------------------------------------
consensus_9713#1      GACCAAGGTTTCATGTTAGTTGGCATTTGTTACCAAGGCATAAATGCAATCAAAAAGGAA 120
                                                                                  

consensus_9713#2      ------------------------------------------------------------
consensus_9713#4      ------------------------------------------------------------
consensus_9713#0      TTACAAGTCGTCTCTTTGTAATCTTGGCCCAACTTGTCGATCTTTATCGGTTAACGGAAC 136
consensus_9713#3      ------------------------------------------------------------
consensus_9713#1      CTGATGGTCTCCGTAGGATTCCATGTCACCCGGCTTCAATATCTAAAACGGTATTACTGA 180
                                                                                  

consensus_9713#2      ------------------------------------------------------------
consensus_9713#4      ------------------------------------------------------------
consensus_9713#0      ATAAATCACACCCATTAAAGATTTTCTTTGAAAGGAACCATCTTGCAAACGATCAATTTG 196
consensus_9713#3      ------------------------------------------------------------
consensus_9713#1      ACCGTTAAAGTACCAACTGACTTCCAGTATGATTAAAATACTTACAATTGATATATATGG 240
                                                                                  

consensus_9713#2      -------------------------------------------CATGGATGAAAGCATAT 17
consensus_9713#4      ------------------------------------------------------------
consensus_9713#0      AACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACCAATTTT 256
consensus_9713#3      ------------------------------------------------------------
consensus_9713#1      GCATCTTTCAAAAAAATCCAAGTCTTACCTTGGCCCAACTTGTCAATCTTTATCGGTTAA 300
                                                                                  

consensus_9713#2      GAATTTAAATGCAGACCAAAATCATGATGAGGTATAAGTCGTAAAAAAGCACACTAAATA 77
consensus_9713#4      ------------------------------------------------------------
consensus_9713#0      CAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATC 316
consensus_9713#3      ------------------------------------------------------------
consensus_9713#1      CGGAACATAAATCACACCCATTAAAGATTTTCTTTGAAAGGAACCATCTTGCAAACGATC 360
                                                                                  

consensus_9713#2      AGAACGACTTGATAGTTTAATTTCTCCCACCCCACCCCGGAAAAAGTAAAATGGGTTTCC 137
consensus_9713#4      ------------------------------------------------------------
consensus_9713#0      ATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAGTTGTTT 376
consensus_9713#3      ------------------------------------------------------------
consensus_9713#1      AATTTGAACTAACGCTTGATTTCCACCTTCTGGTCCTTCAGGACAAATTAAACGACCACC 420
                                                                                  

consensus_9713#2      ACATTTTAACAGAGGAGAAAATAGTGTTCAGTATGAAAGCTGACAATTACTCGTTAGTGC 197
consensus_9713#4      ------------------------------------------------------------
consensus_9713#0      TCCTAATTCAATTCCAGATAGTCGAGCATTTTGGCTATGATTAAACCAATTTTCAACATT 436
consensus_9713#3      ------------------------------------------------------------
consensus_9713#1      AATTTTCAATTGTTCTTTTAGTGCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAAT 480
                                                                                  

consensus_9713#2      TCTGTATTAATGAAATCACATTCATGTAACATAAGAACACAGTTAATAGTTTATGGTAAG 257
consensus_9713#4      ------------------------------------------------------------
consensus_9713#0      TGACAGAGAAAATTTAGTCAACTCATCAATATGTTCTATGCCTACAGCAACACCTGTAGG 496
consensus_9713#3      --------------------------------------------CAGCA-CACCTGTAGG 15
consensus_9713#1      TGCATCATAAGGTGCATCTGACGGCCATCCTTCACGACCATCACCAGTAACAAGTTTAAG 540
                                                                                  

consensus_9713#2      AAATATGCATGGGTGATGATTTTGTTGGTGAAGTGATAATGATTGGTTGATCT-CTGTGA 316
consensus_9713#4      ---------------------------------TCGCCCTGCCCTGTCCCGTC-GTGTCG 26
consensus_9713#0      GCCTACCATAAGAGCCATAC-ACGCCGTTAAATATCCACTACCCGATCCAAC--ATCTAA 553
consensus_9713#3      GC-TACCATAAGAGCCATAC-ACGCCGTTAAATATCCACTACCCGATCCAAC--ATCTAA 71
consensus_9713#1      TTGTTTTCCTAATTCAATTCCAGATAGTCGAGCATTTTGGCTATGATTAAACCAATTTTC 600
                                                                    *        * *  

consensus_9713#2      GCAGAAAAACAAAACAAATTAATAACAGTAGTTAAGAAAAATGGTGATTTAAT-GCCACT 375
consensus_9713#4      CCCTCTTTAAAATGTCACTTGACCTTAAAGATGGACAAAGAGTAAGGCCCGTT-ATTTTG 85
consensus_9713#0      AACATGTGC---ACCAGGTTTA---AGATGATCT-----TTTAATGCTTCCAG-AGCATA 601
consensus_9713#3      AACATGTGC---ACCAGGTTTA---AGATGATCT-----TTTAATGCTTCCAG-AGCATA 119
consensus_9713#1      AACATTTGACAGAGAAAATTTAGTCAACTCATCAATATGTTCTATGCCTACAGCAACACC 660
                                        ** *         *             *              

consensus_9713#2      TCCTTGGCCCAACTTGTCGATCTTTATCGGTTAACGGAACATAAATCACACCCATTAAAG 435
consensus_9713#4      TAATTCGCTCCCACTG-CGA-CTTTACC--TTAGC--AACATAATGCACACCCATTGAGA 139
consensus_9713#0      AGCATG------CATA-TGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATG--G 652
consensus_9713#3      AGCATG------CATA-TGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATG--G 170
consensus_9713#1      TGTAGGGCCTACCATA-TGAGGAGCACTGATAGTCGCGGCATAGCCAATAGACGATG--G 717
                                    *   **     *    *   *    ****    * *  *  *    

consensus_9713#2      ATTTTTTTTGAAAGGAACCTCCTT-GCAAACGATCAATTTGAACTAACGCTTGATTTCCA 494
consensus_9713#4      TTTTTCTTTAGAAGGAACCATCTT-GCAA-CGATCAATTTGAACAAACGCTTGATTTCCA 197
consensus_9713#0      TCGGTCTTCGTAAGAATTCGACTTAGCAAAATATCCAC---GATCCACGGAAAGCATAGT 709
consensus_9713#3      TCGGTCTTCGTAAGAATTCGACTTAGCAAAATATCCAC---GATCCACGGAAAGCATAGT 227
consensus_9713#1      TCGGTCTTCGTAAGAATTCGACTTAGCAAAATATCCAC---GATCCACGGAAAGCATAGT 774
                          * **   *** *  *  *** ****   *** *     *   ***       *   

consensus_9713#2      CCTTCTGGTCCTTCAGGA-CAAATTAAACGACCACCAATTT--TCAATTGTTCTTTTAGT 551
consensus_9713#4      CCTTCTGGTCCTTCAGGAACAAATTAAATCACAAC-AATTC--TCAATTGTTCTTTTAGT 254
consensus_9713#0      ATTCCTGACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGC 769
consensus_9713#3      ATTCCTGACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGC 287
consensus_9713#1      ATTCCTGACAATTTCAGATGATATTACTCGATTTCTGAATAGATTGTTTATAAGTTCTGC 834
                        * ***    **   **  * ****    *   *  * *   *   ** *   **  * 

consensus_9713#2      GCATTAGGAATAACTGGAGCCGCTGCACCTACGTGAATTGCATCATAAGGTGCATCTGAC 611
consensus_9713#4      G-ATTAGAATAAGATT-------------------------------------------- 269
consensus_9713#0      ATGTGTGCTACCGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAGTAGAAAAGTTAC 829
consensus_9713#3      ATGTGTGCTACCGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAGTAGAAAAGTTAC 347
consensus_9713#1      ATGTGTGCTACCGCTCGACTTCCAAGCCATGGTTGAGTTGGAAATAAG------------ 882
                         *  *       *                                             

consensus_9713#2      GGCCATCCTTCACGACCATCAC-CAGTAACAAGTTTAAGTTGTTTTCCTAATTCAATTCC 670
consensus_9713#4      ------------------------------------------------------------
consensus_9713#0      AATGATTGGTGTGTATAATTAAACAACCATCAGCCTCGTGCCGAATTTTGGCCCGAG--- 886
consensus_9713#3      AATGATTGGTGTGTATAATTAAACAACCATCAGCAGGAATTTGTTT-------------- 393
consensus_9713#1      ------------------------------------------------------------
                                                                                  

consensus_9713#2      AGC 673
consensus_9713#4      ---
consensus_9713#0      ---
consensus_9713#3      ---
consensus_9713#1      ---
                         




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)