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Schistosoma mansoni
cluster # 9726 cluster # 9726       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9726#0 length = 1373 sequences # 8  
consensus_9726#1 length = 1225 sequences # 2  
consensus_9726#2 length = 691 sequences # 1  

consensusID : consensus_9726#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1373
fasta sequence
                              [GATTTTGAAGCAGCTGAAGACAATGAATTATCATTCAAAGCTGGAGAGCTTATCCTACTCTTAGATGATTCCGATGAAAATTGGTGGCTTGGAAGCAATAGTAAAGGTCAAGGCTTATTTCCCGCTCAATTTGTCAAACGTGAAATTGAACTTGATGGAGTAAATAATGTCAAATCAAGTCCAAGCGAAGTTTCTCACAATACAGATGTTAAAAGAAACCAACCTTCCACAAAAATTGTCCCTCAACTTGATGAGAAGAAAATTGATGAATGTTTACGTTTAATTACAACTGTAGATCCTACTGGTGAATTTCAGCAAGATCCACCAGAATTAAGTCAACTTGAAGCACAATGTGTAGCAATGGTTCCACTTGTTGATCCTGAATTAAAATTAGTTGATAAAGAAATTATTATGCTTACAGAATTAAATCAACGTTTATTAGATGCATTTCAATTGTATCATGATATTATGTCACGTCAGAATCCTTCAAATGCTTATTATAACGGAATGTCTAATACTATCACTAGCACCACGACCAACTCAATAAATCCAACAATCCCTTACTTACCACCAAATACTCCGAATATATATCCATATACACAGCCAGAATCGTCAATGACTAAATCTTCATCTGCAGTACCTATGAATGGATTCACTATGCCAACAGATTTAAATGGAACTGTGATGTTTCCTCCTACTGACTCTTATCCTATGTCAACTGGAATTTATGCAAATCCACAAATAGAAAATTTCGGTGGTAATCTTCCACAAAACCCTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAAATCAAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACAACAACCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTAT-AAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTT-GTTGTCTTGTTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAATTCAAACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGAA]

[+] EMBL CD095784             [GATTTTGAAGCAGCTGAAGACAATGAATTATCATTCAAAGCTGGAGAGCTTATCCTACTCTTAGATGATTCCGATGAAAATTGGTGGCTTGGAAGCAATAGTAAAGGTCAAGGCTTATTTCCCGCTCAATTTGTCAAACGTGAAATTGAACTTGATGGAGTAAATAATGTCAAATCAAGTCCAAGCGAAGTTTCTCACAATACAGATGTTAAAAGAAACCAACCTTCCACAAAAATTGTCCCTCAACTTGATGAGAAGAAAATTGATGAATGTTTACGTTTAATTACAACTGTAGATCCTACTGGTGAATTTCAGCAAGATCCACCAGAATTAAGTCAACTTGAAGCACAATGTGTAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD079354             [                                                                                                                                                                                                               GTTAAAAGAAACCAACCTTCCAAAAAAATTGTCCCTCAACTTGATGAGAAGAAAATTGATGAATGTTTACGTTTAATTACAACTGTAGATCCTACTGGTGAATTTCAACAAGATCCACCAGAATTAAGTCAACTTGAAGCAGAATGTGTAGCAATGGTTCCACTTGTTGATCCTGAATTAAAATTAGTTGATAAAGAAATTATTATGCTTACAGAATTAAATCAACGTTTATTAGATGCATTTCAATTGTATCATGATATTATGTCACGTCAGAATCCTTCAAATGCTTATTATAACGGAATGTCTAATACTATCACTAGCACCACGACCAACTCAATAAATCCAACAATCCCTTACTTACCACCAAATACTCCGAATATATATCCATATACACAGCCAGAATCGTCAATGACTAAATCTTCATCTGCAGTACCTATGAATGGATTCACTATGCCAACAGATTTAAATGGAACTGTGATGTTTCCTCCTACTGACTCTTATCCTATGTCAACTGGAATTTATGCAAATCCACAAATAGAAAATTTCGGTGGTAATCTTCCACAAAACCCTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTNTATGGATCAAATCANATAGTACCTTCCGATGTTGTn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD079341             [                                                                                                                                                                                                                                                                                                                                                                                                                             gaggcCAGAATT CGGC ACGAGGATTAGATGCATTTCAATTGTATCATGATATTATGTCACGTCAGAATCCTTCAAATGCTTATTATAACGGAATGTCTAATACTATCACTAGCACCACGACCAACTCAATAAATCCAACAATCCCTTACTTACCACCAAATACTCCGAATATATATCCATATACACAGCCAGAATCGTCAATGACTAAATCTTCATCTGCAGTACCTATGAATGGATTCACTATGCCAACAGATTTGAATGGAACTGTGATGTTTCCTCCTACTGACTCTTATCCTATGTCAACTGGAATTTATGCAAATCCACAAATAGAAAATTTCGGTGGTAATCTTCCACAAAACCCTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAGATCAAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACAACAACCGTAGGTTTCATCTAACTCCATANAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGGTCTTTTCTTTTAGGGGAAAGCTTCATT CTCTAATAT ACATACANATGATTTCTTTTTATNAAAC ATATCTTCAGTTATGCTCTAATAAA CATTAACCATTTTCAATTTGTCTTTCATTCTCANCTACTACTCACTCACTAGTAGTAGTTCATCCGTTGGTGGCCTGGNTTTTTTTCTGAAAACTNC ATCAAATTATCCTCATCCTATCATTTGGGGATTAANTCCAACCAT ATTAATT TNAATAATTGGGATTATTC TCAAACTTA ATAggg   ]
[-] EMBL CD073631             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGTGGTAATCTTCCACAAAACCCTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAAATCAAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACAACACCCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTAT AAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTT GTTGTCTTGTTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAATTCAAACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGAA]
[-] EMBL CD074354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            aCCA AAACCCCTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAAATCAAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACAACAACCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTAT AAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTT GTTGTCTTGTTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAATTCAAACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGAA]
[+] EMBL CD080442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gaggCACAAAACCCTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAAATCAAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACAACAACCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTAT AAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTT GTTGTCTTGTTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAATTCANACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGA ]
[-] EMBL CD073618             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACCCTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAGATCAAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACAACAACCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTAT AAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTT GTTGTCTTGTTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAATTCAAACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGAA]
[-] EMBL CD076821             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTGTACAGCAGTTTTATGGATCAAATCAAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACAACACCCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTAT AAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTT GTTGTCTTGTTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAATTCAAACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGAA]


>consensus_9726#0 GATTTTGAAGCAGCTGAAGACAATGAATTATCATTCAAAGCTGGAGAGCTTATCCTACTC TTAGATGATTCCGATGAAAATTGGTGGCTTGGAAGCAATAGTAAAGGTCAAGGCTTATTT CCCGCTCAATTTGTCAAACGTGAAATTGAACTTGATGGAGTAAATAATGTCAAATCAAGT CCAAGCGAAGTTTCTCACAATACAGATGTTAAAAGAAACCAACCTTCCACAAAAATTGTC CCTCAACTTGATGAGAAGAAAATTGATGAATGTTTACGTTTAATTACAACTGTAGATCCT ACTGGTGAATTTCAGCAAGATCCACCAGAATTAAGTCAACTTGAAGCACAATGTGTAGCA ATGGTTCCACTTGTTGATCCTGAATTAAAATTAGTTGATAAAGAAATTATTATGCTTACA GAATTAAATCAACGTTTATTAGATGCATTTCAATTGTATCATGATATTATGTCACGTCAG AATCCTTCAAATGCTTATTATAACGGAATGTCTAATACTATCACTAGCACCACGACCAAC TCAATAAATCCAACAATCCCTTACTTACCACCAAATACTCCGAATATATATCCATATACA CAGCCAGAATCGTCAATGACTAAATCTTCATCTGCAGTACCTATGAATGGATTCACTATG CCAACAGATTTAAATGGAACTGTGATGTTTCCTCCTACTGACTCTTATCCTATGTCAACT GGAATTTATGCAAATCCACAAATAGAAAATTTCGGTGGTAATCTTCCACAAAACCCTCAT AGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAAATCAAATA GTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTAT GGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAAC AACACCCTCTCAACTCAGAGAATACAACAACAACAACCGTAGGTTTCATCTAACTCCATA AAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAG ACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATG ATTTCTTTTTATAAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTTTCAAT TTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTTGTTGTCTTG TTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAATTCAA ACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGAA



consensusID : consensus_9726#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1225
fasta sequence
                              [CCTCCGGGCCAANAATTCGGCACGAGGCTTATTTTCTAATTTCTTTGAAAATTCTTCCAATTTATGTAGTTGTCTATATATCTCTGATAGGTCTGCTAAATGAACACTCGATTCGATTTTTTAGTCACTTATAACCACATGGCAACTTGAACACAATAGAAAAGGAGCAAATTATGGAGAAAACGCTTTTCTTGAAAGTCAGGTTTATGTACAGAAAAGCGAAAGTATTTATGGACTTATACATGACTTTGGACTTCTGAGAATGTCTGGAAGCATATTAAATATGGTAGCTGCAGCACAGGTAAATATCTAGTCAAAACTGTGGCACGTGATTCTGCATTTTACAGACGCTTCCTGGTGCCTCTCGGGACTCTGACGAGGGATATTTACGGGACTCCTCTAACAGTCTCGTTTGAGGGTTTTCAAATGGGATCAGTTTTTGTATAGCTTAAATCAATAAGGCACATAAAATTGACATGTTTGTTATCATTAATTCTACAATATTGACTAATATCATTTGATAAGATTAAAATTTTCTTCCTATCAACTTTCCCAATTAACACTCTTCTGACCAAATAAACTCGATGAAAGTGAGAAACCAGGTAGGTCACTTTTCAATATATGGTTTCGTATGTAATAACTCATACGTGAAAAGTATACGTTTACGTNCCAGCTTAATTGAAAAGAGAACTTTTAAATAATGATTTTCTTCCGTTCCCTGTCCCCCTCCTCATCCATCTTTTTTTTCTAATGTAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACACCACCCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTATAAACAATATCTTCAGTTATGCTCTAATAAACCATTACCCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTTGTTGTCTTGTTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAATTCAAACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGAA]

[+] EMBL CD082624             [CCTCCGGGCCAANAATTCGGCACGAGGCTTATTTTCTAATTTCTTTGAAAATTCTTCCAATTTATGTAGTTGTCTATATATCTCTGATAGGTCTGCTAAATGAACACTCGATTCGATTTTTTAGTCACTTATAACCACATGGCAACTTGAACACAATAGAAAAGGAGCAAATTATGGAGAAAACGCTTTTCTTGAAAGTCAGGTTTATGTACAGAAAAGCGAAAGTATTTATGGACTTATACATGACTTTGGACTTCTGAGAATGTCTGGAAGCATATTAAATATGGTAGCTGCAGCACAGGTAAATATCTAGTCAAAACTGTGGCACGTGATTCTGCATTTTACAGACGCTTCCTGGTGCCTCTCGGGACTCTGACGAGGGATATTTACGGGACTCCTCTAACAGTCTCGTTTGAGGGTTTTCAAATGGGATCAGTTTTTGTATAGCTTAAATCAATAAGGCACATAAAATTGACATGTTTGTTATCATTAATTCTACAATATTGACTAATATCATTTGATAAGATTAAAATTTTCTTCCTATCAACTTTCCCAATTAACACTCTTCTGACCAAATAAACTCGATGAAAGTGAGAAACCAGGTAGGTCACTTTTCAATATATGGTTTCGTATGTAATAACTCATACGTGAAAAGTATACGTTTACGTNCCAGCTTAATTGAAAAGAGAACTTTTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD076220             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATACGTTTACGTCCCAGCTTAATTGAAAAGAGAACTTTTAAATAATGATTTTCTTCCGTTCCCTGTCCCCCTCCTCATCCATCTTTTTTTTCTAATGTAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACACCACCCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTATAAACAATATCTTCAGTTATGCTCTAATAAACCATTACCCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTTGTTGTCTTGTTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAATTCAAACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGAA]


>consensus_9726#1 CCTCCGGGCCAANAATTCGGCACGAGGCTTATTTTCTAATTTCTTTGAAAATTCTTCCAA TTTATGTAGTTGTCTATATATCTCTGATAGGTCTGCTAAATGAACACTCGATTCGATTTT TTAGTCACTTATAACCACATGGCAACTTGAACACAATAGAAAAGGAGCAAATTATGGAGA AAACGCTTTTCTTGAAAGTCAGGTTTATGTACAGAAAAGCGAAAGTATTTATGGACTTAT ACATGACTTTGGACTTCTGAGAATGTCTGGAAGCATATTAAATATGGTAGCTGCAGCACA GGTAAATATCTAGTCAAAACTGTGGCACGTGATTCTGCATTTTACAGACGCTTCCTGGTG CCTCTCGGGACTCTGACGAGGGATATTTACGGGACTCCTCTAACAGTCTCGTTTGAGGGT TTTCAAATGGGATCAGTTTTTGTATAGCTTAAATCAATAAGGCACATAAAATTGACATGT TTGTTATCATTAATTCTACAATATTGACTAATATCATTTGATAAGATTAAAATTTTCTTC CTATCAACTTTCCCAATTAACACTCTTCTGACCAAATAAACTCGATGAAAGTGAGAAACC AGGTAGGTCACTTTTCAATATATGGTTTCGTATGTAATAACTCATACGTGAAAAGTATAC GTTTACGTNCCAGCTTAATTGAAAAGAGAACTTTTAAATAATGATTTTCTTCCGTTCCCT GTCCCCCTCCTCATCCATCTTTTTTTTCTAATGTAGTTCCAACTTATCTGATGAATGAGT CTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAAC AACACCACCCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTAT TTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAA AAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTATAAACAATATCTTCAGT TATGCTCTAATAAACCATTACCCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCAC TCACTAGTAGTAGTTCATCCGTTGTTGTCTTGTTTTTTTTCTGTAAACTTCTATCAAATT ATCTTCATTCTATCATTTGTGATTTAATTCAAACCATAATTAATTATAAATAATTGTAAT TATTCATCATACTTATATAAGTGAA



consensusID : consensus_9726#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence
                              [TCGGTCCGAGGCCTCCTACTGACTCTTATCCTATGTCAACTGGTAATTTATGCAAATCCACACATAGAAAATTTCGGTGGTAATCTTCCACAAAACCCTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAAATCAAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACAACAACCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTATAAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTTGTTGTCTTGTTTTTTTTCTGTAAACTTCTATCANATTATCTTCATTCTATCATTTGTGATTTAATTCAACCCATATTAAATATAATATNGTNANTATTCATCATACTTATATAAGTGA]

[+] EMBL CD083250             [TCGGTCCGAGGCCTCCTACTGACTCTTATCCTATGTCAACTGGTAATTTATGCAAATCCACACATAGAAAATTTCGGTGGTAATCTTCCACAAAACCCTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAAATCAAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAGAGAATACAACAACAACAACCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTATAAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTTTCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTTGTTGTCTTGTTTTTTTTCTGTAAACTTCTATCANATTATCTTCATTCTATCATTTGTGATTTAATTCAACCCATATTAAATATAATATNGTNANTATTCATCATACTTATATAAGTGA]


>consensus_9726#2 TCGGTCCGAGGCCTCCTACTGACTCTTATCCTATGTCAACTGGTAATTTATGCAAATCCA CACATAGAAAATTTCGGTGGTAATCTTCCACAAAACCCTCATAGTGGTCAGGTATCATCT CAACCATTTCCTGTACAGCAGTTTTATGGATCAAATCAAATAGTACCTCCCGATGTTGTT ACGCAACAAATGCAATCATATCCATCTGGCAATAACAATTATGGAGTTCCAACTTATCTG ATGAATGAGTCTCAATCTATGGTGTATACAGATCAATCAAACAACACCCTCTCAACTCAG AGAATACAACAACAACAACCGTAGGTTTCATCTAACTCCATAAAAACTGCTAGGAATTAC TAAGAACTATTTACTTATGTAAGTGAATGATATTTTATCGAGACGGGTGTTGTTCTTTTC TTTTAAGGAAAAGCTTCATTCCTCTAATATAACATACAAATGATTTCTTTTTATAAACAA TATCTTCAGTTATGCTCTAATAAACCATTAACCATTTTCAATTTGTCTTTCATTCTCAAC TACTACTCACTCACTAGTAGTAGTTCATCCGTTGTTGTCTTGTTTTTTTTCTGTAAACTT CTATCANATTATCTTCATTCTATCATTTGTGATTTAATTCAACCCATATTAAATATAATA TNGTNANTATTCATCATACTTATATAAGTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9726#0      GATTTTGAAGCAGCTGAAGACAATGAATTATCATTCAAAGCTGGAGAGCTTATCCTACTC 60
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      ------------------------------------------------------------
                                                                                  

consensus_9726#0      TTAGATGATTCCGATGAAAATTGGTGGCTTGGAAGCAATAGTAAAGGTCAAGGCTTATTT 120
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      --------------------------CCTCCGGGCCAANAATTCGGCACGAGGCTTATTT 34
                                                                                  

consensus_9726#0      CCCGCTCAATTTGTCAAACGTGAAATTGAACTTGATGGAGTAAATAATGTCAAATCAAGT 180
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      TCTAATTTCTTTGAAAATTCTTCCAATTTATGTAGTTGTCTATATA-TCTCTGAT--AGG 91
                                                                                  

consensus_9726#0      CCAAGCGAAGTTTCTCACAATACAGATGTTAAAAGAAACCAACCTTCCACAAAAATTGTC 240
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      TCTGCTAAATGAACACTCGATTC-GATTTTTTAGTCACTTATAACCACATGGCAACTTGA 150
                                                                                  

consensus_9726#0      CCTCAACTTGATGAGAAGAAAATTGATGAATGTTTACGTTTAATTACAACTGTAGATCCT 300
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      ACACAA-TAGAAAAGGAGCAAATT-ATGGA-GAAAACGCTTTTCTTGAAAGTCAGGTTTA 207
                                                                                  

consensus_9726#0      ACTGGTGAATTTCAGCAAGATCCACCAGAATTAAGTCAACTTGAAGCACAATGTGTAGCA 360
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      TGTACAGAAAAGCGAAAGTATTTAT-GGACTTA----TACATGACTTTGGACTTCTGAGA 262
                                                                                  

consensus_9726#0      ATGGTTCCACTTGTTGATCCTGAATTAAAATTAGTTGATAAAGAAATTATTATGCTTACA 420
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      ATGTCTGGAAGC----ATATTAAAT--ATGGTAGCTGCAGCACAGGTAAATATCTAGTCA 316
                                                                                  

consensus_9726#0      GAATTAAATCAACGTTTATTAGATGCATTTCAATTGTATCATGATATTATGTCACGTCAG 480
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      AAACTGTGGCA-CGTG-ATTCTGCATTTTACAGACGCTTCCTGGTGCCTC------TCGG 368
                                                                                  

consensus_9726#0      AATCCTTCAAATGCTTATTATAACGGAATGTCTAATACTATCACTAGCACCACGACCAAC 540
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      GACTCTGACGAGGGATATTTACGGGACTCCTCTAACAGTCTCGTTTGAGGGTTTTCAAAT 428
                                                                                  

consensus_9726#0      TCAATAAATCCAACAATCCCTTACTTACCACCAAATACTCCGAATATATATCCATATACA 600
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      GGGATCAGTTTTTGTATAGCTTAAAT-CAATAAGGCACATAAAATTGACATGTTTGTTAT 487
                                                                                  

consensus_9726#0      CAGCCAGAAT-CGTCAATGACTAAATCTTCATCTGCAGTACCTATGAATGGATTCACTAT 659
consensus_9726#2      ------------------------------------------------------------
consensus_9726#1      CATTAATTCTACAATATTGACTAA--TATCATTTGATAAGATTAAAATT---TTCTTCCT 542
                                                                                  

consensus_9726#0      GCCAACAGATTTAAATGGAACTGTGATGTTTCCTCCTACTGACTCTTATCCTATGTCAAC 719
consensus_9726#2      --------------------TCGGTCCGAGGCCTCCTACTGACTCTTATCCTATGTCAAC 40
consensus_9726#1      ATCAACTTTCCCAATTAACACT---------CTTCTGACCAAATAA-ACTCGATGA-AAG 591
                                                     * **  **  * *   *  * ***  ** 

consensus_9726#0      TGG-AATTTATGCAAATC---CACAAATAGAAAATTTCGGTGGTAATCTTCCACAAAACC 775
consensus_9726#2      TGGTAATTTATGCAAATC---CACACATAGAAAATTTCGGTGGTAATCTTCCACAAAACC 97
consensus_9726#1      TGAGAAACCAGGTAGGTCACTTTTCAATATATGGTTTCGTATGTAATAACTCATA----C 647
                      **  **   * * *  **        *** *   *****   *****    ** *    *

consensus_9726#0      CTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAAATC 835
consensus_9726#2      CTCATAGTGGTCAGGTATCATCTCAACCATTTCCTGTACAGCAGTTTTATGGATCAAATC 157
consensus_9726#1      GTGAAAAGTATACGTTTACGTNCCAGC--TTAATTGAAAAGAGAACTT----------TT 695
                       * * *    *  * *  * *  ** *  **   ** * **     **          * 

consensus_9726#0      AAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACA 895
consensus_9726#2      AAATAGTACCTCCCGATGTTGTTACGCAACAAATGCAATCATATCCATCTGGCAATAACA 217
consensus_9726#1      AAATAATGATTTTC--TTCCGTTCCCTGTC---CCCCTCCTCATCCATCTTTTTTTTCTA 750
                      ***** *   *  *  *   *** *    *     *   *  ********     *   *

consensus_9726#0      ATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAAT 955
consensus_9726#2      ATTATGGAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAAT 277
consensus_9726#1      ---ATGTAGTTCCAACTTATCTGATGAATGAGTCTCAATCTATGGTGTATACAGATCAAT 807
                         *** *****************************************************

consensus_9726#0      CAAACAACACCCTCTCAACTCAGAGAATACAACAACAACAACCGTAGGTTTCATCTAACT 1015
consensus_9726#2      CAAACAACACCCTCTCAACTCAGAGAATACAACAACAACAACCGTAGGTTTCATCTAACT 337
consensus_9726#1      CAAACAACACCCTCTCAACTCAGAGAATACAACAACACCACCCGTAGGTTTCATCTAACT 867
                      ************************************* ** *******************

consensus_9726#0      CCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTA 1075
consensus_9726#2      CCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTA 397
consensus_9726#1      CCATAAAAACTGCTAGGAATTACTAAGAACTATTTACTTATGTAAGTGAATGATATTTTA 927
                      ************************************************************

consensus_9726#0      TCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATAC 1135
consensus_9726#2      TCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATAC 457
consensus_9726#1      TCGAGACGGGTGTTGTTCTTTTCTTTTAAGGAAAAGCTTCATTCCTCTAATATAACATAC 987
                      ************************************************************

consensus_9726#0      AAATGATTTCTTTTTATAAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTT 1195
consensus_9726#2      AAATGATTTCTTTTTATAAACAATATCTTCAGTTATGCTCTAATAAACCATTAACCATTT 517
consensus_9726#1      AAATGATTTCTTTTTATAAACAATATCTTCAGTTATGCTCTAATAAACCATTACCCATTT 1047
                      ***************************************************** ******

consensus_9726#0      TCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTTGTTG 1255
consensus_9726#2      TCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTTGTTG 577
consensus_9726#1      TCAATTTGTCTTTCATTCTCAACTACTACTCACTCACTAGTAGTAGTTCATCCGTTGTTG 1107
                      ************************************************************

consensus_9726#0      TCTTGTTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAA 1315
consensus_9726#2      TCTTGTTTTTTTTCTGTAAACTTCTATCANATTATCTTCATTCTATCATTTGTGATTTAA 637
consensus_9726#1      TCTTGTTTTTTTTCTGTAAACTTCTATCAAATTATCTTCATTCTATCATTTGTGATTTAA 1167
                      ***************************** ******************************

consensus_9726#0      TTCAAACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGAA 1373
consensus_9726#2      TTCAACCCATA-TTAAATATAAT--ATNGTNANTATTCATCATACTTATATAAGTGA- 691
consensus_9726#1      TTCAAACCATAATTAATTATAAATAATTGTAATTATTCATCATACTTATATAAGTGAA 1225
                      ***** ***** **** *****   ** ** * ************************ 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)