cluster # 9739

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Schistosoma mansoni
cluster # 9739 cluster # 9739 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9739#0 length = 1055 sequences # 6
consensus_9739#1 length = 845 sequences # 1

consensus_9739#2 length = 667 sequences # 3
consensus_9739#3 length = 357 sequences # 1

consensusID : consensus_9739#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1055
fasta sequence

                              [GCCTGNAATTCGGCACGCAGGCCGTCAAATTCTAATTTGGCACAGACTCTCTCTGCTACTAGTGGTGTTGCAGGCAATCAGTCCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGATCTATCTCAACAAAATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGAAACCCAAGACAGAATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGAGATTCTATGCTCAGTTCGAAAAGTAGTAGCAGCAGTAGCTGTACTCCGTTGAATGCAAACATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCTGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACAAAGAAGCTCATCCCACAACTCAGGCCATTTTTCCGATTTTATATTCATGAAAGTTTTCTCTGTAATATATAGTTCACTCACGCGTTAAGTTGTATATTGTGCAATCATTAACATTTTAAAATACCCTTTTTAACAAAAGATATCAACTCTTGTAATCAATCTCATAGTCTACCTCGATGTATTGTTTATCATTTATGTAGTTACAACTTACTGTCTTGTTCTTAAAATGAACTCCCATATTACATATTATGTACCTATCCTTCTTTTTTATCTACCT-AATTCG-TTTTACCTCATTTCCTTTCTTTCTT-ACTAACAGAATATGCTTTATTTAACCGTATTATTCAGTTACCTACTACAGAATTAATTTTTTCCTTAAA-TCAGCTGTCGTTACTTATAATATTTGATTGATATTTAAATCATTTGC-ATTTTT-AATTAAAAC]

[+] EMBL CD081542             [GCCTGNAATTCGGCACGCAGGCCGTCAAATTCTAATTTGGCACAGACTCTCTCTGCTACTAGTGGTGTTGCAGGCAATCAGTCCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGATCTATCTCAACAAAATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGAAACCCAAGACAGAATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGAGATTCTATGCTCAGTTCGAAAAGTAGTAGCAGCAGTAGCTGTACTCCGTTGAATGCAAACATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCTGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACAAAGAAGCTCATCCCACAACTCAGGCCATTTTTCCGATTTTATATTCATGAAAGTTTTCTCTGTAATATATAGTTCACTCACGCGTTAAGTTGTATATTGTGCAATCATTAACATTTTAAAATACCCTTTTTAACAAAAGATATCAACTCTTGTAATCAATCTCATAGTCTACCTCGATGTATTGTTTATCATTTATGTAGTTACAACTTACTGTCTTGTTCTTAANATGAACTCCCATATTACATATTATGTACCTATCCTTCTTTTTTATCTACCTNAATTCG TTTTACCTCATTTCCTTTCTTTCTT ACTAACAGAATATGCTTTATTTACCCGTATTATTCAGTTACCTACTACAGAANTAATTNTTTCCTTAAA TCAGCTGNCGNTACTTATAATATTTGATTGATATTTAATCCATTTGC ATTTTT AATTAAA  ]
[+] EMBL CD082467             [                                 AATTTGGCACAGACTCTCTCTGCTACTAGTGGTGTTGCAGGCAATCAGTCCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGATCTATCTCAACAAAATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGAAACCCAAGACAGAATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGAGATTCTATGCTCAGTTCGAAAAGTAGTAGCAGCAGTAGCTGTACTCCGTTGAATGCAAACATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCTGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACAAAGAAGCTCATCCCACAACTCAGGCCATTTTTCCGATTNTATATTCATGAAAGTTTTCTCTGT ATATATAGTTCACTCACGCGTT                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD126194             [                                                                                                                                               AGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGAAACCCAAGACAGAATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGAGATTCTATGCTCAGTTCGAAAAGTAGTAGCAGCAGTAGCTGTACTCCGTTGAATGCAAACATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCTGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACA GTAAGAATtgttat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD138694             [                                                                                                                                                                                                                                                                                                                                          TTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAGTTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCTGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGCTTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACAAAGAAGCTCATCCCACAACTCAGGCCATTTTTCCGATTTTATATTCATGAAAGTTTTCTCTGTAATATATAGTTCACTCACGCGTTAAGTTGTATATTGTGCAATCATTAACATTTTAAAATACCCTTTTTAACAAAAGATATCAACTC                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD076066             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAATCACTGCGG TTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACAAAGAAGCTCATCCCACAACTCAGGCCATTTTTCCGATTTTATATTCATGAAAGTTTTCTCTGTAATATATAGTTCACTCACGCGTTAAGTTGTATATTGTGCAATCATTAACATTTTAAAATACCCTTTTTAACAAAAGATATCAACTCTTGTAATCAATCTCATAGTCTACCTCGATGTATTGTTTATCATTTATGTAGTTACAACTTACTGTCTTGTTCTTAAAATGAACTCCCATATTACATATTATGTACCTATCCTTCTTTTTTATCTACCT AATTCGTTTTTACCTCATTTCCTTTCTTTCTTAACTAACAGAATATGCTTTATTTAACCGTATTATTCAGTTACCTACTACAGAATTAATTTTTTCCTTAAATTCAGCTGTCGTTACTTATAATATTTGATTGATATTTAAATCATTTGCAATTTTTAAATTAAAAC]
[-] EMBL CD075366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACAAAGAAGCTCATCCCACAACTCAGGCCATTTTTCCGATTTTATATTCATGAAAGTTTTCTCTGTAATATATAGTTCACTCACGCGTTAAGTTGTATATTGTGCAATCATTAACATTTTAAAATACCCTTTTTAACAAAAGATATCAACTCTTGTAATCAATCTCATAGTCTACCTCGATGTATTGTTTATCATTTATGTAGTTACAACTTACTGTCTTGTTCTTAAAATGAACTCCCATATTACATATTATGTACCTATCCTTCTTTTTTATCTACCT AATTCGTTTTTACCTCATTTCCTTTCTTTCTTAACTAACAGAATATGCTTTATTTAACCGTATTATTCAGTTACCTACTACAGAATTAATTTTTTCCTTAAATTCAGCTGTCGTTACTTATAATATTTGATTGATATTTAAATCATTTGCAATTTTTAAATTAAAAC]




>consensus_9739#0
GCCTGNAATTCGGCACGCAGGCCGTCAAATTCTAATTTGGCACAGACTCTCTCTGCTACT
AGTGGTGTTGCAGGCAATCAGTCCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGAT
CTATCTCAACAAAATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGA
AACCCAAGACAGAATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGAT
TCAGTTAAACGAGATTCTATGCTCAGTTCGAAAAGTAGTAGCAGCAGTAGCTGTACTCCG
TTGAATGCAAACATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCA
AATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCTGTTTCTGGT
TTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCG
GTTTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAA
TTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATA
ACCTCATTTCTTCACAAAGAAGCTCATCCCACAACTCAGGCCATTTTTCCGATTTTATAT
TCATGAAAGTTTTCTCTGTAATATATAGTTCACTCACGCGTTAAGTTGTATATTGTGCAA
TCATTAACATTTTAAAATACCCTTTTTAACAAAAGATATCAACTCTTGTAATCAATCTCA
TAGTCTACCTCGATGTATTGTTTATCATTTATGTAGTTACAACTTACTGTCTTGTTCTTA
AAATGAACTCCCATATTACATATTATGTACCTATCCTTCTTTTTTATCTACCTAATTCGT
TTTACCTCATTTCCTTTCTTTCTTACTAACAGAATATGCTTTATTTAACCGTATTATTCA
GTTACCTACTACAGAATTAATTTTTTCCTTAAATCAGCTGTCGTTACTTATAATATTTGA
TTGATATTTAAATCATTTGCATTTTTAATTAAAAC

consensusID : consensus_9739#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 845
fasta sequence

                              [ACCGGCCAANAATTTTGCACGAGGAGCTGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGAGATTCTATGCTCAGTTCGAAAAGTAGTAGCAGCAGTAGCTGTACTCCGTTGAATGCAAACATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCTGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACANAGAAGCTCATCCCACAACTCAGGCCATGTTTNCGATTNTATATTCATGAAAGTTTTCTCTGTAATATATAGTTCACTCACGCGTTTAAGTTGTATATTGTNGCATCATTNACATTTTAAAATACCCTTTTTACCAAAAGATATCAACTTCTGTAATCAACTCATAGGCTACCTCGATGAATGGTTAACAATTAAGGAGNTACACCTACCTGGCTTGGTCTAAAATGAACCCCCATTAAAAATAAGGAACCTTCCCTCTTTTTATTACCCAAATGGGTTACCCCATNCTTTTTTTTAAAAAAAAAAATGCTTATTACCGGGTTTTCGTCCCCCACAAAAAAATTTTCCTAATACACCGGGGGTCTAAAAATGGGGGGGTAAAAAATGGCCCTTTAA]

[+] EMBL CD080822             [ACCGGCCAANAATTTTGCACGAGGAGCTGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGAGATTCTATGCTCAGTTCGAAAAGTAGTAGCAGCAGTAGCTGTACTCCGTTGAATGCAAACATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCTGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACANAGAAGCTCATCCCACAACTCAGGCCATGTTTNCGATTNTATATTCATGAAAGTTTTCTCTGTAATATATAGTTCACTCACGCGTTTAAGTTGTATATTGTNGCATCATTNACATTTTAAAATACCCTTTTTACCAAAAGATATCAACTTCTGTAATCAACTCATAGGCTACCTCGATGAATGGTTAACAATTAAGGAGNTACACCTACCTGGCTTGGTCTAAAATGAACCCCCATTAAAAATAAGGAACCTTCCCTCTTTTTATTACCCAAATGGGTTACCCCATNCTTTTTTTTAAAAAAAAAAATGCTTATTACCGGGTTTTCGTCCCCCACAAAAAAATTTTCCTAATACACCGGGGGTCTAAAAATGGGGGGGTAAAAAATGGCCCTTTAA]




>consensus_9739#1
ACCGGCCAANAATTTTGCACGAGGAGCTGTTCCCAATAATAATTCTGATAGCAAGCAACA
CCAGACACAAGATTCAGTTAAACGAGATTCTATGCTCAGTTCGAAAAGTAGTAGCAGCAG
TAGCTGTACTCCGTTGAATGCAAACATGCAGGAAACGCGACTGTTCAATTCACATCGGCT
GTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAAC
CGCTGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAA
CCGAATCACTGCGGTTTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTC
CAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGA
TTTCCATAATATAACCTCATTTCTTCACANAGAAGCTCATCCCACAACTCAGGCCATGTT
TNCGATTNTATATTCATGAAAGTTTTCTCTGTAATATATAGTTCACTCACGCGTTTAAGT
TGTATATTGTNGCATCATTNACATTTTAAAATACCCTTTTTACCAAAAGATATCAACTTC
TGTAATCAACTCATAGGCTACCTCGATGAATGGTTAACAATTAAGGAGNTACACCTACCT
GGCTTGGTCTAAAATGAACCCCCATTAAAAATAAGGAACCTTCCCTCTTTTTATTACCCA
AATGGGTTACCCCATNCTTTTTTTTAAAAAAAAAAATGCTTATTACCGGGTTTTCGTCCC
CCACAAAAAAATTTTCCTAATACACCGGGGGTCTAAAAATGGGGGGGTAAAAAATGGCCC
TTTAA

consensusID : consensus_9739#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 667
fasta sequence

                              [TCTGGACATACGAAATCGTGCCCCAAAGAAGCGTCCGCATCAAACCATATTGGGGCTCAGGGATTCAGCCATTCTAGACAACAAGATTCAGTTTTACCAAATATACGGTCACTAAAACAGCAACATTCCCAGTCAAATTCTAAT-TTGGCACAGACTCTCTCTGCTACTAGTGGTGTTGCAGGCAATCAGT-CCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGATCTATCTCAACAAAATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGAAACCCAAGACAGAATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGAGATTCTATGCTCAGTTCGAGAAGTAGTGGCAGCAGTAGCTGTACTCCGTTGAATGCAAACATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCANGAATTTCAACCGCTGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTCTGGGAGAAGTTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTT]

[-] EMBL CD188936             [TCTGGACATACGAAATCGTGCCCCAAAGAAGCGTCCGCATCAAACCATATTGGGGCTCAGGGATTCAGCCATTCTAGACAACAAGATTCAGTTTTACCAAATATACGGTCACTAAAACAGCAACATTCCCAGTCAAATTCTAAT TTGGCACAGACTCTCTCTGCTACTAGTGGTGTTGCAGGCAATCAGT CCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGATCTATCTCAACAAAATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCT                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD184651             [                                             CATATTGGGGCTCAGGGATTCAGCCATTCTAGACAACAAGATTCAGTTTTACCAAATATACGGTCACTAAAACAGCAACATTCCCAGTCAAATTCTAAT TTGGCACAGACTCTCTCTGCTACTAGTGGTGTTGCAGGCAATCAGT CCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGATCTATCTCAACAAAATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGAAACCCAAGACAGAATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGAGATTCTATGCTCAGTTCGAGAAGTAGTGGCAGCAGTAGCTGTACTCCGTTGAATGCAAACATGCAGGAAACGCGA                                                                                                                                                                                                                                        ]
[-] EMBL CD134477             [                                                                                        aAGTTTTA CAAATATACGGTCACTAAACAAGCACCATTCCCAGTC AATTCTAATNNTGGCACAGACTCTCTCTGCTACTAGTGGTG TGCAGGCAATCAGTCCCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGATCTATCTCAACANAATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGAAACCCAAGACAGAATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGAGATTCTATGCTCAGTTCGAAAAGTAGTAGCAGCAGTAGCTGTACTCCGTTGAATGCAAACATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCANGAATTTCAACCGCTGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTCTGGGAGAAGTTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTT]




>consensus_9739#2
TCTGGACATACGAAATCGTGCCCCAAAGAAGCGTCCGCATCAAACCATATTGGGGCTCAG
GGATTCAGCCATTCTAGACAACAAGATTCAGTTTTACCAAATATACGGTCACTAAAACAG
CAACATTCCCAGTCAAATTCTAATTTGGCACAGACTCTCTCTGCTACTAGTGGTGTTGCA
GGCAATCAGTCCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGATCTATCTCAACAA
AATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGAAACCCAAGACAG
AATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGA
GATTCTATGCTCAGTTCGAGAAGTAGTGGCAGCAGTAGCTGTACTCCGTTGAATGCAAAC
ATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAAT
TGTGCTCCTCCTCCTCCTCCTCCANGAATTTCAACCGCTGTTTCTGGTTTCACACTGACA
AGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTCTGGGAGAAG
TTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCA
CTTCGTT

consensusID : consensus_9739#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 357
fasta sequence

                              [CTTTTATTACGGGGCTATGGTTGTATCAGAAAAATGAATCAATTACCTGCGGAGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCAGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACAAAGAAG]

[-] EMBL CD179408             [CTTTTATTACGGGGCTATGGTTGTATCAGAAAAATGAATCAATTACCTGCGGAGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCAGTTTCTGGTTTCACACTGACAAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAAATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACAAAGAAG]




>consensus_9739#3
CTTTTATTACGGGGCTATGGTTGTATCAGAAAAATGAATCAATTACCTGCGGAGAAACGC
GACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAATTGTGCTCCTCCTC
CTCCTCCTCCACGAATTTCAACCGCAGTTTCTGGTTTCACACTGACAAGTCATCCTTAGA
CATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAAATTTTCTACCTCAT
CCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACCACTTCGTTGTAATT
AGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCTTCACAAAGAAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9739#1      ------------------------------------------------------------
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      ------------------------------------------------------------
consensus_9739#2      TCTGGACATACGAAATCGTGCCCCAAAGAAGCGTCCGCATCAAACCATATTGGGGCTCAG 60
                                                                                  

consensus_9739#1      ------------------------------------------------------------
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      ------------------------------------------------GCCTGNAATTCG 12
consensus_9739#2      GGATTCAGCCATTCTAGACAACAAGATTCAGTTTTACCAAATATACGGTCACTAAAACAG 120
                                                                                  

consensus_9739#1      ------------------------------------------------------------
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      GCACGCAGGCCGTCAAATTCTAATTTGGCACAGACTCTCTCTGCTACTAGTGGTGTTGCA 72
consensus_9739#2      CAACATTCCCAGTCAAATTCTAATTTGGCACAGACTCTCTCTGCTACTAGTGGTGTTGCA 180
                                                                                  

consensus_9739#1      ------------------------------------------------------------
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      GGCAATCAGTCCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGATCTATCTCAACAA 132
consensus_9739#2      GGCAATCAGTCCAGATTAAGACCTCCTTTTTATTCTAATGGTAATGATCTATCTCAACAA 240
                                                                                  

consensus_9739#1      -----------------------------------ACCGGCCAANAATTTTGCACGAGGA 25
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      AATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGAAACCCAAGACAG 192
consensus_9739#2      AATGAGCTTGCAGCATCATCTACAGGATCTAGTTCAACTTCTTTTGGAAACCCAAGACAG 300
                                                                                  

consensus_9739#1      GCTGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGA 85
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      AATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGA 252
consensus_9739#2      AATGTTCCCAATAATAATTCTGATAGCAAGCAACACCAGACACAAGATTCAGTTAAACGA 360
                                                                                  

consensus_9739#1      GATTCTATGCTCAGTTCGAAAA-GTAGTAGCAGCAGTAGCTGTACTCCGTTGAATGCAAA 144
consensus_9739#3      -------CTTTTATTACGGGGCTATGGTTGTATCAGAAAAATGAATCAATTACCTGCGGA 53
consensus_9739#0      GATTCTATGCTCAGTTCGAAAA-GTAGTAGCAGCAGTAGCTGTACTCCGTTGAATGCAAA 311
consensus_9739#2      GATTCTATGCTCAGTTCGAGAA-GTAGTGGCAGCAGTAGCTGTACTCCGTTGAATGCAAA 419
                                * * * **      * ** * * *** *     * **  **   ***  *

consensus_9739#1      CATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAA 204
consensus_9739#3      -------GAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAA 106
consensus_9739#0      CATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAA 371
consensus_9739#2      CATGCAGGAAACGCGACTGTTCAATTCACATCGGCTGTCTCATATGCCAAATCACCAAAA 479
                             *****************************************************

consensus_9739#1      TTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCTGTTTCTGGTTTCACACTGAC 264
consensus_9739#3      TTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCAGTTTCTGGTTTCACACTGAC 166
consensus_9739#0      TTGTGCTCCTCCTCCTCCTCCTCCACGAATTTCAACCGCTGTTTCTGGTTTCACACTGAC 431
consensus_9739#2      TTGTGCTCCTCCTCCTCCTCCTCCANGAATTTCAACCGCTGTTTCTGGTTTCACACTGAC 539
                      ************************* ************* ********************

consensus_9739#1      AAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAA 324
consensus_9739#3      AAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAA 226
consensus_9739#0      AAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTTTGGGAGAA 491
consensus_9739#2      AAGTCATCCTTAGACATGAAATAATCTGAAAAAAAACCGAATCACTGCGGTCTGGGAGAA 599
                      *************************************************** ********

consensus_9739#1      ATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACC 384
consensus_9739#3      ATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACC 286
consensus_9739#0      ATTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACC 551
consensus_9739#2      GTTTTCTACCTCATCCCATCTCTTCTCGATGATTTCCAGAGAGACATAATTATTTTGACC 659
                       ***********************************************************

consensus_9739#1      ACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCT 444
consensus_9739#3      ACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCT 346
consensus_9739#0      ACTTCGTTGTAATTAGAGTGATATGTGATACTCGGATTTCCATAATATAACCTCATTTCT 611
consensus_9739#2      ACTTCGTT---------------------------------------------------- 667
                      ********                                                    

consensus_9739#1      TCACANAGAAGCTCATCCCACAACTCAGGCCATGTTTNCGATTNTATATTCATGAAAGTT 504
consensus_9739#3      TCACAAAGAAG------------------------------------------------- 357
consensus_9739#0      TCACAAAGAAGCTCATCCCACAACTCAGGCCATTTTTCCGATTTTATATTCATGAAAGTT 671
consensus_9739#2      ------------------------------------------------------------
                                                                                  

consensus_9739#1      TTCTCTGTAATATATAGTTCACTCACGCGTTTAAGTTGTATATTGTNGCATCATTNACAT 564
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      TTCTCTGTAATATATAGTTCACTCACGCGTT-AAGTTGTATATTGTGCAATCATTAACAT 730
consensus_9739#2      ------------------------------------------------------------
                                                                                  

consensus_9739#1      TTTAAAATACCCTTTTTACCAAAAGATATCAACTTCTGTAATCAA-CTCATAGGCTACCT 623
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      TTTAAAATACCCTTTTTAACAAAAGATATCAACTCTTGTAATCAATCTCATAGTCTACCT 790
consensus_9739#2      ------------------------------------------------------------
                                                                                  

consensus_9739#1      CGATGAATGGTTAA-CAATTAAGGAGNTACACCTACCTGGCTTGGTCT-AAAATGAACCC 681
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      CGATGTATTGTTTATCATTTATGTAGTTACAACTTACTGTCTTGTTCTTAAAATGAACTC 850
consensus_9739#2      ------------------------------------------------------------
                                                                                  

consensus_9739#1      CCAT--TAAAAATAAGGAACCTTCCCTCTTTTTAT---TACCCAAATGGGTT-ACCCCAT 735
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      CCATATTACATATTATGTACCTATCCTTCTTTTTTATCTACCTAATTCGTTTTACCTCAT 910
consensus_9739#2      ------------------------------------------------------------
                                                                                  

consensus_9739#1      NCTTTTTTTTAA-----AAAAAAAAATGCTTATT---ACCGGGTTTTC--GTCCCCCACA 785
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      TTCCTTTCTTTCTTACTAACAGAATATGCTTTATTTAACCGTATTATTCAGTTACCTACT 970
consensus_9739#2      ------------------------------------------------------------
                                                                                  

consensus_9739#1      AAAAAATT-------TTCCTAATACACCGGGGGT--CTAAAAATGGGGGGGTAAAAAATG 836
consensus_9739#3      ------------------------------------------------------------
consensus_9739#0      ACAGAATTAATTTTTTCCTTAAATCAGCTGTCGTTACTTATAATATTTGATTGATATTTA 1030
consensus_9739#2      ------------------------------------------------------------
                                                                                  

consensus_9739#1      GCCCTTTAA---------------- 845
consensus_9739#3      -------------------------
consensus_9739#0      AATCATTTGCATTTTTAATTAAAAC 1055
consensus_9739#2      -------------------------